FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.044e-47
Identity = 90/147 (61.22%), Postives = 120/147 (81.63%), Query Frame = 1
Query:  271 KEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT--DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 705
            +++ TK GT+IGIDLGTTYSCVGVYKNG VEIIANDQGNRITPS+VAF+    +RLIG+AAKNQ  +NP+ TIFD KRLIGR + DK VQ D+K  P+K++++  KP ++V++   + K F+PEE+SAM+L KMKE AE++LGK+++
Sbjct:   26 EKKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGEQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVLDKSNKPSVEVKV-GADNKQFTPEEVSAMVLVKMKEIAESYLGKEVK 171          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.044e-47
Identity = 94/141 (66.67%), Postives = 117/141 (82.98%), Query Frame = 1
Query:  280 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            ATK G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ D+K  P+++V+ +GKP ++V+ + GE K F PEEIS+M+LTKMKETAEA+LG  +
Sbjct:    2 ATK-GVAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQCDLKHWPFQVVSDEGKPKVKVEYK-GEEKSFFPEEISSMVLTKMKETAEAYLGHPV 140          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.044e-47
Identity = 93/136 (68.38%), Postives = 111/136 (81.62%), Query Frame = 1
Query:  295 TVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            T IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMK  P++++N   KP +QV  + GETK F PEEIS+M+LTKMKE AEA+LG  +
Sbjct:    5 TAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFRVINDGDKPKVQVSYK-GETKAFYPEEISSMVLTKMKEIAEAYLGHPV 139          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.044e-47
Identity = 93/136 (68.38%), Postives = 111/136 (81.62%), Query Frame = 1
Query:  295 TVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            T IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMK  P++++N   KP +QV  + GETK F PEEIS+M+LTKMKE AEA+LG  +
Sbjct:    5 TAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFRVINDGDKPKVQVSYK-GETKAFYPEEISSMVLTKMKEIAEAYLGHPV 139          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: GRP78_ASHGO (78 kDa glucose-regulated protein homolog OS=Ashbya gossypii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.044e-47
Identity = 94/163 (57.67%), Postives = 123/163 (75.46%), Query Frame = 1
Query:  214 SLVVLAIVFFGGLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +LV L +   G    +  A  +A   GTVIGIDLGTTYSCV + +NG  EI+AN+QGNRITPS+VAFTD ERLIG+AAKNQ A NP  TIFD+KRLIG K+ DK VQR++K  P+++V+++G P + V ++ GE K+F+PEEIS M+L KMK+ AE +LGKK+
Sbjct:   21 ALVCLPMFAGGSRGLVYAADTDAENYGTVIGIDLGTTYSCVALMRNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVANNPKNTIFDIKRLIGLKYNDKTVQREIKHLPFEVVDKNGMPAVAVTVK-GERKLFTPEEISGMVLGKMKQIAEEYLGKKV 182          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.670e-47
Identity = 89/135 (65.93%), Postives = 113/135 (83.70%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 693
            +   IGIDLGTTYSCVG++++  +EIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D EVQ DMK  P+K++++ GKP I V+ + GE K F+PEEIS+M+LTKM+ETAE++LG
Sbjct:    1 MAPAIGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRKFADPEVQSDMKHFPFKVIDKAGKPVISVEFK-GEEKQFTPEEISSMVLTKMRETAESYLG 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.670e-47
Identity = 91/146 (62.33%), Postives = 116/146 (79.45%), Query Frame = 1
Query:  265 IAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  E     GTVIGIDLGTTYSCVGV K G VEII NDQGNRITPS+VAFT+ ERL+G+AAKNQ A NP  TIFD+KRLIG +F+DK +Q+++K  PYK+ ++DG+P ++ ++ +GE K F+ EEISAMIL KMK+ AE +LGKK+
Sbjct:   31 VKAESNENYGTVIGIDLGTTYSCVGVMKAGRVEIIPNDQGNRITPSYVAFTEDERLVGDAAKNQIASNPTNTIFDIKRLIGHRFDDKVIQKEIKHLPYKVKDQDGRPVVEAKV-NGELKTFTAEEISAMILGKMKQIAEDYLGKKV 175          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 188.348 bits (477), Expect = 3.487e-47
Identity = 91/138 (65.94%), Postives = 113/138 (81.88%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +   +GIDLGTTYSCV  + N  V+IIANDQGNR TPS+VAFTD+ERLIG+AAKNQAA+NP  T+FD KRLIGR F D EVQ DMK  P+K+++ DGKP IQV+ + GETK F+PE+IS+M+L KMKETAE++LG K+
Sbjct:    1 MSKAVGIDLGTTYSCVAHFANDRVDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPSNTVFDAKRLIGRNFNDPEVQADMKHFPFKLIDVDGKPQIQVEFK-GETKNFTPEQISSMVLGKMKETAESYLGAKV 137          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.487e-47
Identity = 95/136 (69.85%), Postives = 112/136 (82.35%), Query Frame = 1
Query:  301 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 705
            IGIDLGTTYSCVGV++N  V+IIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMK  P+K+  + D KP I VQ R GE K F+PEEIS+M+L KMKETAEA+LGK+++
Sbjct:    7 IGIDLGTTYSCVGVWQNERVDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPMIAVQYR-GEEKTFTPEEISSMVLLKMKETAEAYLGKQVK 141          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.487e-47
Identity = 91/138 (65.94%), Postives = 115/138 (83.33%), Query Frame = 1
Query:  292 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 705
            G VIGIDLGTTYSCVGV+KNG VEI+ N+ GNRITPS+V+F D ER +GEAAK +A V+P +T+FDVKRLIGRKF+D+EV +D  L PY+IVN  GKP I+VQI+D +T  F+PE+ISAM+L KMKE A++FLGK ++
Sbjct:   28 GPVIGIDLGTTYSCVGVFKNGRVEILNNELGNRITPSYVSFVDGERKVGEAAKLEATVHPTQTVFDVKRLIGRKFDDQEVVKDRSLLPYEIVNNQGKPNIKVQIKDKDT-TFAPEQISAMVLEKMKEIAQSFLGKPVK 164          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_CAEBR2.044e-4761.22Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
HSP70_XENLA2.044e-4766.67Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HS71B_BOVIN2.044e-4768.38Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71B_BOSMU2.044e-4768.38Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
GRP78_ASHGO2.044e-4757.6778 kDa glucose-regulated protein homolog OS=Ashbya... [more]
HSP72_PARBA2.670e-4765.93Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
GRP78_PICAN2.670e-4762.3378 kDa glucose-regulated protein homolog OS=Pichia... [more]
HSP71_YEAST3.487e-4765.94Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP70_LEIDO3.487e-4769.85Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
GRP78_PLAFO3.487e-4765.9478 kDa glucose-regulated protein homolog OS=Plasmo... [more]

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Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
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