FC931175

Overview
NameFC931175
Unique NameFC931175
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15314 contig Ccv1_Contig15314:5..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: CHI1_RHIOL (Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30
Identity = 80/222 (36.04%), Postives = 116/222 (52.25%), Query Frame = 1
Query:   43 TFVSLLVTLSL----IKASQGAGG--IVIYWGQNGNEGTLTST-----CATSKYAYVNIAFLNKFGNGQTPEINLAGHC------NPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLT-AAPQCPFPDRFLGAALNTGLFDYVWVQFYNTH 654
            TF+ + ++  L    ++A+  + G  ++ YWGQN   G+ T       C + +   V ++FL+ F  G TPEINL+  C      N     C  V   IK CQ +G+KV+                  +  A  +WN F GG+S +RP G AV+DG+D DIE G++  +   A F++A   +    +L  AAPQCPFPD  LG+ LN+  FDYV VQFYN +
Sbjct:    5 TFLGMAISAFLASTGVQAAWSSNGPNVMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGTPEINLSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLFGGGSSDTRPFGDAVIDGVDLDIEGGASTGY---AAFVNALRQKFSSNFLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNNY 223          
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: CHI2_RHIOL (Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.134e-29
Identity = 79/222 (35.59%), Postives = 113/222 (50.90%), Query Frame = 1
Query:   43 TFVSLLVTLSL----IKASQGAGG--IVIYWGQNGNEGTLTST-----CATSKYAYVNIAFLNKFGNGQTPEINLAGHC------NPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLT-AAPQCPFPDRFLGAALNTGLFDYVWVQFYNTH 654
            TF+ + ++  L    ++A+  + G  ++ YWGQN   G+ T       C + +   V ++FL+ F  G  PEINL+  C      N     C  V   IK CQ +G+KV+                  +  A  +WN F GG S +RP G AV+DG+D DIE GS+  +     F++A   +    +L  AAPQCPFPD  LG+ LN+  FDYV VQFYN +
Sbjct:    5 TFLGMAISAFLASTGVQAAWSSHGPNVMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGIPEINLSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLFGGGNSDTRPFGDAVIDGVDLDIEGGSSTGY---VAFVNALRQKFSSNFLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNNY 223          
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: XIP2_ORYSJ (Xylanase inhibitor protein 2 OS=Oryza sativa subsp. japonica GN=Chib3H-h PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.039e-28
Identity = 80/208 (38.46%), Postives = 111/208 (53.37%), Query Frame = 1
Query:   40 ATFVSLLVTLSLIKASQGAGGIVIYWGQNGNEGTLTSTCATSKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGG--TSSSRPLG-AAVLDGIDFDIEQGSTLHWDDLARFLSAYSS--RGK-KVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFY 645
            A   +LL+  +   A+    G+ +YWG++  EG+L   C T +Y  V I F N FG+G+   ++++GH   A G        IK CQSRGI V+                 A +VAD LWN +LGG     +RP G  A +DGIDF I+QG   H+DDLAR L  Y+   RG+  V LTA  +C +PD  L  AL TG+F  + V+ +
Sbjct:   11 AAAAALLLLAAPPPATADDPGLAVYWGRHKEEGSLREACDTGRYTTVIITFYNAFGHGRY-SLDISGHPLAAVGA------DIKHCQSRGITVLLSIGGQGGAYSLPTNASAADVADNLWNAYLGGHRAGVARPFGDDAAVDGIDFFIDQGGADHYDDLARRLDGYNKYYRGRVGVLLTATTRCSYPDHRLEKALATGVFARIHVRMF 211          
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: XIP1_ORYSJ (Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.295e-27
Identity = 78/202 (38.61%), Postives = 107/202 (52.97%), Query Frame = 1
Query:   82 ASQGAGGIVIYWGQNGNEGTLTSTCATSKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSS--RPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGK---KVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNTHLVSIVH 672
            A+   G + ++WG+N NEGTL  TC T  Y  V I+F + FG+G+    +L+GH        RV+   IK CQS+ I V                  A +VAD +WN  + G      RP G A +DGIDF I+QG+  H+DDLAR L AY+   +    V LTA  +C FPD  +  AL+T LF+ + V+FY+    S  H
Sbjct:   29 AAGKTGQMTVFWGRNKNEGTLKETCDTGLYTTVVISFYSVFGHGRYWG-DLSGH------DLRVIGADIKHCQSKNIFVFLSIGGAGKDYSLPTSKSAADVADNIWNAHMDGRRPGVFRPFGDAAVDGIDFFIDQGAPDHYDDLARNLYAYNKMYRARTPVRLTATVRCAFPDPRMKKALDTKLFERIHVRFYDDATCSYNH 223          
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: CHI1_CANAL (Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.314e-26
Identity = 71/206 (34.47%), Postives = 100/206 (48.54%), Query Frame = 1
Query:   58 LVTLSLIKASQGAGGIVIYWGQN--GNEGTLTSTCATSKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGG----CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG-KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNTH 654
            L+ L  I     A  I  YWGQN  G++ TL   C++S  + + ++FL+ F N     +N A  C+         C  +   IKSCQ +G  ++                +A   A  LWN F GG  S RP   A++DG DFDIE      +  LA  L  Y S G K  YL+AAPQCP+PD  +G  ++    D+ ++QFYN +
Sbjct:    5 LIILLAISIVASASNIAAYWGQNAGGDQQTLGDYCSSSPASIIILSFLDGFPN---LSLNFANQCSGTFSSGLAHCSQIGSDIKSCQQQGKTILLSLGGATGNYGFSSDSEAVQFAGTLWNKFGGGKDSERPFDDAIVDGFDFDIENKDQTGYAALATQLRKYFSTGTKSYYLSAAPQCPYPDESVGDLMSQVDLDFAFIQFYNNY 207          
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: CONB_CANEN (Concanavalin B OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26
Identity = 77/199 (38.69%), Postives = 102/199 (51.26%), Query Frame = 1
Query:   64 TLSLIKASQGAGGIVIYWGQNGNEGTLTSTCATSKYAYVNIAFLNKFG-NGQTPEINLAGHCNPAAGG-CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQG-STLHWDDLARFLSAYSSRGKKVYL-TAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 648
            TLSL   S     I +YWGQ   +G L  TC T+ Y  V I+FL+KFG   + PE+ L G C P+ G  C  +   IK CQ  G+KV                  AK++A+YL   FL       PLG   LDGI FDI++    L+WD+L   L       +  +L +AAP C  PD +L  A+ T  FDY++V+FYN
Sbjct:   21 TLSLADISSTE--IAVYWGQR-EDGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSFLESQIKECQRMGVKVFLALGGPKGTYSACSADYAKDLAEYLHTYFLSERREG-PLGKVALDGIHFDIQKPVDELNWDNLLEELYQIKDVYQSTFLLSAAPGCLSPDEYLDNAIQTRHFDYIFVRFYN 215          
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: CHIT_YEAST (Endochitinase OS=Saccharomyces cerevisiae GN=CTS1 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24
Identity = 67/192 (34.90%), Postives = 100/192 (52.08%), Query Frame = 1
Query:  103 IVIYWGQN--GNEGTLTSTCATSKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGG----CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSS-RPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG-KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNTH 654
            I +YWGQN  G + +L + C +S      ++FLN+F    T  +N A  C+         C  +++ I++CQS G KV+                 A+  A  LW+ F  GT +S RP  +AV+DG DFDIE  + + +  LA  L    + G K+ YL+AAPQCP+PD  +G  L     D+ ++QFYN +
Sbjct:   29 IAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQF---PTLGLNFANACSDTFSDGLLHCTQIAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFGEGTGASERPFDSAVVDGFDFDIENNNEVGYSALATKLRTLFAEGTKQYYLSAAPQCPYPDASVGDLLENADIDFAFIQFYNNY 217          
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: CHI2_CANAL (Chitinase 2 OS=Candida albicans GN=CHT2 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23
Identity = 72/214 (33.64%), Postives = 100/214 (46.73%), Query Frame = 1
Query:   43 TFVSLLVTLSLIKASQGAGG--IVIYWGQNGNEGT--LTSTCATSKYAYVNIAFLNKFGNGQTPEINLAGHC-NPAAGG---CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSR--GKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNTH 654
            +F SLL    +  ++  +    + +YWGQNG  G   L   C  +    V ++FLN F +     +N A  C N    G   C  +   IK+CQS G  V+                 A   AD LWN F  G    RP   AV+DG DFDIE G    + +LA  L    ++   K  +L+AAPQCP+PD  LG  L+    D+ ++QFYN +
Sbjct:    3 SFKSLLAAAVVASSALASASNQVALYWGQNGAGGQERLAQYCQETDVDIVLLSFLNLFPDPLN--VNFANQCGNTFESGLLHCSQIGADIKTCQSLGKTVLLSLGGGVGDYGFSDVASATKFADTLWNKFGAGEDPERPFDDAVVDGFDFDIEHGGATGYPELATALRGKFAKDTSKNYFLSAAPQCPYPDASLGDLLSKVPLDFAFIQFYNNY 214          
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: XIP1_WHEAT (Xylanase inhibitor protein 1 OS=Triticum aestivum GN=XIPI PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.011e-23
Identity = 71/227 (31.28%), Postives = 116/227 (51.10%), Query Frame = 1
Query:    7 IAEMATNSPA-----IATFVSLLVTLSLIKASQGAGGIVIYWGQNGNEGTLTSTCATSKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSS--RPLGAAVLDGIDFDIEQGSTL-HWDDLARFLSAYSSR---GKKVYLTAAPQCPFPD-RFLGAALNTGLFDYVWVQFYNT 651
            +A +A   PA     ++   +L +T + + A    G + ++WG+N  EG+L   C +  Y  V ++FL+ FG      ++L+GH   + G        IK CQS+G+ V                  A ++ D+LWN++ GG+  S  RP G A LDG+D  +E G+    +D LA  L+ ++ R   GK ++LTA  +C +P    +G AL TG+F+ V V+ Y +
Sbjct:    1 MAPLAARRPACLLALLSVAAALFLTPTALAAGGKTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGA------DIKHCQSKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAWLDGVDLFLEHGTPADRYDVLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYES 221          
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: CHI3_CANAL (Chitinase 3 OS=Candida albicans GN=CHT3 PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20
Identity = 68/218 (31.19%), Postives = 105/218 (48.17%), Query Frame = 1
Query:   37 IATFVSLLVTLSLIKASQGAGGIVIYWGQN--GNEGTLTSTCATSKYAYVNIAFLNKFGNGQTPEINLAGHCNPA--AGG---CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGG---TSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSR--GKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNTH 654
            + T  SLL+    I A   +  + +YWGQN  G++  L+  C +     V ++F+++F +    ++N A  C     A G   C+ +++ IK CQ++G  ++                 AK  A  LW+ F       ++ RP   AVLDG DFDIE   +  +  LA  L     +   K  YL AAPQCP+PD  +G  L     D+V++QFYN +
Sbjct:    4 LLTIFSLLLPALAINARSNSN-VAVYWGQNSGGSQQRLSYYCDSDAVDIVILSFMHQFPS--PIQLNFANACEGTYTANGILQCQTIAEDIKYCQNKGKTILLSLGGAAGSYGFSDDATAKQFAHTLWDLFGNSKNLATNDRPFYDAVLDGFDFDIENNWSTGYPALATELRTLFQKDTSKNYYLGAAPQCPYPDASVGPLLKQSEIDFVFIQFYNNY 218          
The following BLAST results are available for this feature:
BLAST of FC931175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CHI1_RHIOL4.941e-3036.04Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 S... [more]
CHI2_RHIOL7.134e-2935.59Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 S... [more]
XIP2_ORYSJ6.039e-2838.46Xylanase inhibitor protein 2 OS=Oryza sativa subsp... [more]
XIP1_ORYSJ2.295e-2738.61Xylanase inhibitor protein 1 OS=Oryza sativa subsp... [more]
CHI1_CANAL3.314e-2634.47Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2[more]
CONB_CANEN5.653e-2638.69Concanavalin B OS=Canavalia ensiformis PE=1 SV=1[more]
CHIT_YEAST5.291e-2434.90Endochitinase OS=Saccharomyces cerevisiae GN=CTS1 ... [more]
CHI2_CANAL1.539e-2333.64Chitinase 2 OS=Candida albicans GN=CHT2 PE=3 SV=1[more]
XIP1_WHEAT2.011e-2331.28Xylanase inhibitor protein 1 OS=Triticum aestivum ... [more]
CHI3_CANAL2.081e-2031.19Chitinase 3 OS=Candida albicans GN=CHT3 PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34102C07EF PostHarvP1 Citrus clementina cDNA clone C34102C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931175 ID=FC931175; Name=FC931175; organism=Citrus clementina; type=EST; length=717bp
GGCATAATTGCAGAAATGGCCACAAACTCTCCAGCAATAGCAACATTCGT
CTCCCTGCTGGTCACTCTGTCATTGATCAAAGCCTCTCAAGGCGCCGGCG
GCATCGTAATCTATTGGGGCCAAAACGGCAACGAGGGTACCCTCACTTCA
ACCTGTGCCACAAGCAAATATGCTTATGTCAACATAGCTTTCCTGAACAA
GTTTGGCAACGGCCAGACCCCTGAAATTAACCTTGCCGGCCACTGCAACC
CTGCAGCCGGTGGCTGCAGAGTCGTCAGCGACGCAATCAAGAGTTGTCAG
AGCCGAGGCATCAAAGTTATGCTTTCCCTCGGAGGTGGGGTTGGTAGCTA
CTCTTTGGCTTCTGTAGCTGATGCCAAGAATGTAGCTGATTACTTGTGGA
ACAATTTCTTGGGGGGAACATCAAGTTCAAGGCCATTAGGTGCTGCTGTG
TTGGACGGTATTGATTTTGATATTGAGCAAGGCTCAACTTTGCATTGGGA
TGACCTTGCAAGGTTTCTATCAGCATATAGCAGCCGTGGCAAGAAAGTTT
ACTTAACAGCAGCTCCCCAGTGCCCATTTCCTGATAGGTTTCTGGGTGCT
GCTTTGAACACGGGGCTTTTTGATTATGTATGGGTTCAGTTTTACAACAC
CCACCTTGTCAGTATAGTTCACGAAATACCCAGAATCTTATAGTTCATTT
ACAGATGGGCTTCATCA
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