FC931175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: CHI2_COCP7 (Endochitinase 2 OS=Coccidioides posadasii (strain C735) GN=CTS2 PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 64/231 (27.71%), Postives = 100/231 (43.29%), Query Frame = 1 Query: 22 TNSPAIATFVSLLVTLSLIKASQGAGGIVIYWGQNGNEGTLTSTCATSKYAYVNIAFLNKF---GNGQTPEINLAGHCNPA------------AGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXD--AKNVADYLWNNFLGGT---SSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG--KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 648 TN A VS L SL + +YWGQ + L+ C + + + + F+N F G P N C + GC + + + C++ G ++ + A N AD+LW F T + RP G A +DG DFDIE+GS + + R L + + Y++AAPQC PD++L A++ FD++++QFYN Sbjct: 4 TNILAAFIAVSSLFIQSLALNPYAKSNLAVYWGQGAGQNRLSYFCEKTSFDIIVVGFINVFPDQGPAGWPGSNFGNQCADSYYYTKNGTKTKLLDGCYQIKEDLPKCKALGKTILLSLGGGAVHDFYEVKSEESALNFADFLWGAFGPLTPDWTGPRPFGEASVDGFDFDIEKGSNFGYSIMVRRLRELFLQDPLNRYYISAAPQCIMPDKYLSHAISNSAFDFIFIQFYN 234
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: CHI2_COCIM (Endochitinase 2 OS=Coccidioides immitis GN=CTS2 PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19 Identity = 64/231 (27.71%), Postives = 100/231 (43.29%), Query Frame = 1 Query: 22 TNSPAIATFVSLLVTLSLIKASQGAGGIVIYWGQNGNEGTLTSTCATSKYAYVNIAFLNKF---GNGQTPEINLAGHCNPA------------AGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXD--AKNVADYLWNNFLGGT---SSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG--KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 648 TN A VS L SL + +YWGQ + L+ C + + + + F+N F G P N C + GC + + + C++ G ++ + A N AD+LW F T + RP G A +DG DFDIE+GS + + R L + + Y++AAPQC PD++L A++ FD++++QFYN Sbjct: 4 TNILAAFIAVSSLFIQSLALNPYAKSNLAVYWGQGAGQNRLSYFCEKTSFDIIVVGFINVFPDQGPAGWPGSNFGNQCADSYYYTKNGTKTKLLDGCYQIKEDLPKCKALGKTILLSLGGGAVHDFYEVKSEESALNFADFLWGAFGPLTPDWTGPRPFGEASVDGFDFDIEKGSNFGYSIMVRRLRELFLQDPLNRYYISAAPQCIMPDKYLSHAISNSAFDFIFIQFYN 234
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: CHLY_PARTH (Bifunctional chitinase/lysozyme (Fragment) OS=Parthenocissus quinquefolia PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19 Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 1 Query: 97 GGIVIYWGQNGNEGTLTSTCATSKYAYVNIAFLNKFGNGQTPEINLA 237 GGI IYWGQNGNEGTLT TC T KY+YVNIAFLNKFGNGQTPEINLA Sbjct: 1 GGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLA 47
BLAST of FC931175 vs. ExPASy Swiss-Prot
Match: YKT4_SCHPO (Chitinase-like protein PB1E7.04c OS=Schizosaccharomyces pombe GN=SPAPB1E7.04c PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16 Identity = 61/216 (28.24%), Postives = 99/216 (45.83%), Query Frame = 1 Query: 52 SLLVTLSLIKASQGAGGIVIYWGQN-------GNEGTLTSTCATSKYAYVNIAFLNKFGNGQTPEINLAGHCNPA---AGG----CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLA-RFLSAYSS-RGKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNT 651 S + LSL +Q A ++ YWG N ++ L+S C + Y + ++ + F P + + C+ + +G C + I+ CQ GIKV+ D N A +WN F G S RP G AV+DG D ++ +G+ + A R L Y+S +K Y++AAP C PD L A++ FD++ + +N+ Sbjct: 13 SARLALSLNLTNQTA--VLGYWGSNLAGKMGDRDQKRLSSYCQNTTYDAIILSSVIDFNVDGWPVYDFSNLCSDSDTFSGSELKKCPQIETDIQVCQENGIKVLLSIGGYNGNFSLNNDDDGTNFAFQVWNIFGSGEDSYRPFGKAVVDGFDLEVNKGTNTAYSAFAKRMLEIYASDPRRKYYISAAPTCMVPDHTLTKAISENSFDFLSIHTFNS 226 The following BLAST results are available for this feature:
BLAST of FC931175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931175 ID=FC931175; Name=FC931175; organism=Citrus clementina; type=EST; length=717bpback to top |