FC931252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: NSF_ARATH (Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.240e-12 Identity = 51/164 (31.10%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 235 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSARMESGSGNG-DSEVQRTMLELLTSLMDLKHQTKLGSHGDNXIDILDQ 693 IGGL + +I + + P + LGI KG+LL+GPPGTGKTL+AR + + + V+G E++ K++GE + VR+LF A + + +I DEID+I +R + G G + +L + + L + +G N D+LD+ Sbjct: 217 IGGLGAEFADIFRRAFASRVFPPHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGM--TNRKDLLDE 378
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.991e-11 Identity = 36/101 (35.64%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 244 LDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 546 L + ++ + + + + +P + +A +GVLL GPPGTGKTL AR +A + F+ SG+E G+ + E+F +AR +AP+ +F+DEID+I Sbjct: 497 LGGDVWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSE-KSGAAKINEMFSIARRNAPAFVFVDEIDAI 596
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: FIGL2_HUMAN (Putative fidgetin-like protein 2 OS=Homo sapiens GN=FIGNL2 PE=5 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11 Identity = 42/147 (28.57%), Postives = 71/147 (48.30%), Query Frame = 1 Query: 166 PSKVDP----LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 594 P VDP LV V+ P + + G ++E + P+ P + + P+ VLL+GP G GK LL R +A T +R+ G+ L EG+R+++ F AR PS++ + E++++ AR + + G +V Sbjct: 367 PKGVDPGALELVTSKMVDCGPPVQWADVAGQGALKAALEEELVWPLLRPPAYPG-SLRPPRTVLLFGPRGAGKALLGRCLATQLGATLLRLRGATLAAPGAAEGARLLQAAFAAARCRPPSVLLISELEALLPARDDGAAAGGALQV 512
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: YCF2_MESVI (Protein ycf2 OS=Mesostigma viride GN=ycf2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 223 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES 567 T+ IGG++ +E+ V L +K S P G L GPPGTGKTL+A+A+++ + ++ V GS+ + G + V +LF + +P I+++DEIDSI R E+ Sbjct: 347 TFRDIGGMESLKQELATVAFL-LKQKNYSNSY----PMGYLFAGPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEA 456 The following BLAST results are available for this feature:
BLAST of FC931252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 374
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931252 ID=FC931252; Name=FC931252; organism=Citrus clementina; type=EST; length=767bpback to top |