FC931252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.610e-53 Identity = 110/232 (47.41%), Postives = 156/232 (67.24%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLGSHG-DNXIDILDQ 693 +G V ++ +N+V+V+ +++V P R L S + ILP+ D + M+V + P Y+ IGGL++QI EI+E +ELP+K PE+F +GI PKGVLL+GPPGTGKTLLARAVAH T+ F+RV GSELVQKYIGEG+R+VRELF +A++ +PSIIF+DEID+IG++R ES + +GD EV RT+++LL + ++ + G N IDILD+ Sbjct: 77 IGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNT-SGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDR 307
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 4.685e-53 Identity = 117/221 (52.94%), Postives = 144/221 (65.16%), Query Frame = 1 Query: 34 KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL--MDLKHQTKLGSHGDNXIDILD 690 K +V + GKYVV RV + Y + + LP K+DP V +M VE+ PD+TY IGG +QI++I+EV+ELP+ HPE F LGI PKGVL YGPPG+GKTL+ARAVA+ T FIRV GSELVQKYIGEG+RMVRELF MAR I+F DEID+IG AR + G G+ D+EVQRTMLE+L L D + K+ N DILD Sbjct: 140 KYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGS-DNEVQRTMLEILYQLDGFDARGNIKV-LMATNRPDILD 358
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.119e-53 Identity = 111/232 (47.84%), Postives = 154/232 (66.38%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLGSHG-DNXIDILDQ 693 +G VV V+ N+V+V+ +++V P R L S + +LPS D V M++ P Y IGGL +QI E++E +ELP+K PELF +GI PKGVLLYGPPGTGKTLLA+AVAH T+ F+RV GSELVQKYIGEG+R+VRELF +A++ AP+IIF+DEID++G++R E+ + +GD EVQRT+++LL + + + + G N IDILD+ Sbjct: 102 IGTVVDVVDANRVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANT-SGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDK 332
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 7.992e-53 Identity = 112/231 (48.48%), Postives = 160/231 (69.26%), Query Frame = 1 Query: 4 GEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL--MDLKHQTKLGSHGDNXIDILD 690 G V++V+ +++ +V+ + ++VV P TRVAL + + ILP+ DP V +V + P+ TY+ IGGL +Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A+AH + TFIRV GSELV+KYIGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+ +G G+ EV RT+++LL + D + K+ + N DILD Sbjct: 65 GTVIEVLDEDRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTG-GEREVNRTLMQLLAEMDGFDPRGNVKVIA-ATNRPDILD 293
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 7.992e-53 Identity = 111/231 (48.05%), Postives = 159/231 (68.83%), Query Frame = 1 Query: 4 GEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL--MDLKHQTKLGSHGDNXIDILD 690 G V++V+ ++ +V+ + ++VV P TRVAL + + ILP+ DP V +V + P+ TY+ IGGL +Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A+AH + TFIRV GSELV+KYIGEG+R+V ELF +A+E AP+IIF+DEID+IG+ R++ +G G+ EV RT+++LL + D + K+ + N DILD Sbjct: 62 GSVIEVLDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTG-GEREVNRTLMQLLAEMDGFDPRGNVKVIA-ATNRPDILD 290
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 7.992e-53 Identity = 104/198 (52.53%), Postives = 137/198 (69.19%), Query Frame = 1 Query: 34 KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 K ++ V K+VV RV + + Y + + LP K+D V +M+VE+ PD TY +GG +QI++++EV+E+P+ HPE F +LGI PKGVL+YGPPGTGKTL ARAVA+ TD F+RV GSELVQKY+GEG+RMVR+LF MAR IIF DE+D+IG AR + G+G GD+EVQRTMLEL+ L Sbjct: 105 KYIITVKQIAKFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAG-GDNEVQRTMLELINQL 301
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.780e-52 Identity = 111/231 (48.05%), Postives = 159/231 (68.83%), Query Frame = 1 Query: 4 GEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL--MDLKHQTKLGSHGDNXIDILD 690 G V++V+ + +V+ + ++VV P RVAL + + +LPS+ DP V +V + P TY+ IGGL++Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+AVA+H + TFIRV GSELV+K+IGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+ +G G+ EV RT+++LL + D + K+ + N DILD Sbjct: 63 GNVIEVLDDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTG-GEREVNRTLMQLLAEMDGFDPRGNVKVIA-ATNRPDILD 291
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.780e-52 Identity = 109/220 (49.55%), Postives = 144/220 (65.45%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL--MDLKHQTKL 654 VGEV+K + + K +VK +YVV P TRVAL + + LP +VDPLV M E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R G+ + D E+QRT++ELL + D H+ K+ Sbjct: 57 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKM 275
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.780e-52 Identity = 109/220 (49.55%), Postives = 144/220 (65.45%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL--MDLKHQTKL 654 VGEV+K + + K +VK +YVV P TRVAL + + LP +VDPLV M E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R G+ + D E+QRT++ELL + D H+ K+ Sbjct: 57 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKM 275
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.780e-52 Identity = 109/220 (49.55%), Postives = 144/220 (65.45%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL--MDLKHQTKL 654 VGEV+K + + K +VK +YVV P TRVAL + + LP +VDPLV M E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R G+ + D E+QRT++ELL + D H+ K+ Sbjct: 57 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKM 275 The following BLAST results are available for this feature:
BLAST of FC931252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 374
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931252 ID=FC931252; Name=FC931252; organism=Citrus clementina; type=EST; length=767bpback to top |