FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_YARLI (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Yarrowia lipolytica GN=ATM1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.803e-25 Identity = 68/220 (30.91%), Postives = 116/220 (52.73%), Query Frame = 1 Query: 31 SHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 ++G+I ++ Y P P +L+ S PG KT IVG +GSGKST+++ FR + R+ + ++PQD +F ++ +N+ E D+++ A +L VR+ ++ V E G S G++Q + + RVLLK ++ LDEAT+++DT T+ + ++ Q D T + IAHR+ +V DSD ++ L+ G +EE Sbjct: 449 TNGEIRFENVTYGYHPDRP-ILKNASFVIPGGLKTAIVGPSGSGKSTILKLAFRFYDTQEGRILIDGQDVREVTLASLRSAIGVVPQDTPLFNDSIMNNIRFGRLEADDKEVENAACAAKLDALVRQLPDGWNTNVGERGMMISGGEKQRLAVARVLLKNSPVVFLDEATSALDTNTERQLLANMDQVLGDKTCVAIAHRLRTVADSDKIICLNQGGVEE 667
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: YHEH_BACSU (Probable multidrug resistance ABC transporter ATP-binding/permease protein yheH OS=Bacillus subtilis GN=yheH PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24 Identity = 73/218 (33.49%), Postives = 113/218 (51.83%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEE-YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+++ RD+ Y VL+ IS T + +VG TGSGKS+++ LFR + R+ + I+ QDP +F GT+ SNV +E T+E+I AL + ++K ++ V E G S G+RQL+ R L IL+LDEATA +DT T+ +IQ++L T IAHR++++ ++D +L+L G I E Sbjct: 428 GRVEFRDVSFAYQEGEE-VLKHISFTAQKGETVALVGHTGSGKSSILNLLFRFYDAQKGDVLIDGKSIYNMSRQELRSHMGIVLQDPYLFSGTIGSNVSLDDERMTEEEIKNALRQVGAEPLLKKLPKGINEPVIEKGSTLSSGERQLISFARALAFDPAILILDEATAHIDTETEAVIQKALDVVKQGRTTFVIAHRLSTIRNADQILVLDKGEIVE 644
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB25B_ARATH (ABC transporter B family member 25, mitochondrial OS=Arabidopsis thaliana GN=ABCB25 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24 Identity = 68/218 (31.19%), Postives = 113/218 (51.83%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I+ ++ Y P +L GIS P K IVG +GSGKST+++ LFR + + R+ + ++PQD V+F T+ N+ T+E+++EA + + + + K + V E G S G++Q V L R LK IL+ DEAT+++D+ T+ I +L+ S+ T I IAHR+T+ + D +++L +G + E Sbjct: 477 GNIEFENVHFSYLPERK-ILDGISFVVPAGKSVAIVGTSGSGKSTILRMLFRFFDTDSGNIRIDGQDIKEVRLDSLRSSIGVVPQDTVLFNDTIFHNIHYGRLSATEEEVYEAARRAAIHETISNFPDKYSTIVGERGLKLSGGEKQRVALARTFLKSPAILLCDEATSALDSTTEAEILNALKALASNRTSIFIAHRLTTAMQCDEIVVLENGKVVE 693
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: YKNV_BACSU (Uncharacterized ABC transporter ATP-binding protein yknV OS=Bacillus subtilis GN=yknV PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24 Identity = 69/227 (30.40%), Postives = 114/227 (50.22%), Query Frame = 1 Query: 4 KSRPN--HSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHG 675 K +PN H+ +G+I +++ Y L +S + P +VG TGSGK+T+ + R + A R+++SI+ QD +F GT+ N+ +DE++ +A + + ++V E G S GQRQL+ R LL I++LDEATAS+DT T+ IQQ+L+ T + IAHR++++ D+D +++L HG Sbjct: 348 KEKPNAIHNEKINGEISFEEVEFSYDEKRK-ALHAVSFSIPAGSTLALVGHTGSGKTTIANLISRFYDAAGGTIKIDGIPIKDLSLASLRSQISIVLQDTFIFSGTIMENIRFGRPNASDEEVMKASQAVGADEFISDLAEGYATEVEERGSVLSAGQRQLISFARALLADPAIIILDEATASIDTETEVKIQQALKTLLKGRTAVMIAHRLSTIRDADRIIVLDHG 573
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y1303_MYCBO (Uncharacterized ABC transporter ATP-binding protein Mb1303c OS=Mycobacterium bovis GN=Mb1303c PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24 Identity = 68/218 (31.19%), Postives = 117/218 (53.67%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+++ + Y P P V+R +S IVG TG+GK+TL+ L R E + R+R+ ++ QD +++GT+ N+ E T ++I EA + V ++V+ +G + S+G++QL+ + R L R ++L+LDEAT+SVDT T+ LIQ+++R+ D T IAHR++++ D+D +L++ G I E Sbjct: 395 GRVEFEHVNFAYLPGTP-VIRDLSLVAEPGSTVAIVGPTGAGKTTLVNLLMRFYEIGSGRILIDGVDIASVSRQSLRSRIGMVLQDTWLYDGTIAENIAYGRPEATTDEIVEAARAAHVDRFVNTLPAGYQTRVSGDGGSISVGEKQLITIARAFLARPQLLILDEATSSVDTRTELLIQRAMRELRRDRTSFIIAHRLSTIRDADHILVVQTGQIVE 611
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y1272_MYCTU (Uncharacterized ABC transporter ATP-binding protein Rv1272c/MT1310 OS=Mycobacterium tuberculosis GN=Rv1272c PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24 Identity = 68/218 (31.19%), Postives = 117/218 (53.67%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+++ + Y P P V+R +S IVG TG+GK+TL+ L R E + R+R+ ++ QD +++GT+ N+ E T ++I EA + V ++V+ +G + S+G++QL+ + R L R ++L+LDEAT+SVDT T+ LIQ+++R+ D T IAHR++++ D+D +L++ G I E Sbjct: 395 GRVEFEHVNFAYLPGTP-VIRDLSLVAEPGSTVAIVGPTGAGKTTLVNLLMRFYEIGSGRILIDGVDIASVSRQSLRSRIGMVLQDTWLYDGTIAENIAYGRPEATTDEIVEAARAAHVDRFVNTLPAGYQTRVSGDGGSISVGEKQLITIARAFLARPQLLILDEATSSVDTRTELLIQRAMRELRRDRTSFIIAHRLSTIRDADHILVVQTGQIVE 611
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_HAEI8 (Lipid A export ATP-binding/permease protein msbA OS=Haemophilus influenzae (strain 86-028NP) GN=msbA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24 Identity = 65/222 (29.28%), Postives = 114/222 (51.35%), Query Frame = 1 Query: 28 PSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD--PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 P+ G ++ +++ Y L IS + P K +VGR+GSGKST+ + R + R +++ Q +F T+ +N+ ++Y+ E+I A + + K D+ + ENG + S GQRQ + + R LL+ +L+LDEAT+++DT ++ IQ +L + D TVI IAHR++++ ++D +L++ HG I E Sbjct: 342 PAKGALEFKNVSFAYQGKEELALNNISFSVPAGKTVALVGRSGSGKSTIANLVTRFYDIEQGEILLDGVNIQDYRLSNLRENCAVVSQQVHLFNDTIANNIAYAAQDKYSREEIIAAAKAAYALEFIEKLPQGFDTVIGENGASLSGGQRQRLAIARALLRNSPVLILDEATSALDTESERAIQSALDELKKDRTVIVIAHRLSTIENADEILVIDHGEIRE 563
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCB7_RAT (ATP-binding cassette sub-family B member 7, mitochondrial OS=Rattus norvegicus GN=Abcb7 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24 Identity = 65/200 (32.50%), Postives = 106/200 (53.00%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 VL G+S P KK IVG +GSGKST+++ LFR EP R + ++PQD V+F T+ N+ + E+++ L D + + D++V E G S G++Q V + R +LK +++ DEAT+S+D+ T+ I ++R T I IAHR+++V+D+D +++LS G + E Sbjct: 487 VLSGVSFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYGNINASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLKLSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMRDVVKHRTSIFIAHRLSTVVDADEIIVLSQGKVAE 686
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_VIBVY (Lipid A export ATP-binding/permease protein msbA OS=Vibrio vulnificus (strain YJ016) GN=msbA PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24 Identity = 66/222 (29.73%), Postives = 117/222 (52.70%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPL--EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G+++++D+ Y L +S P K +VGR+GSGKST+ R + + RT+ +++ Q+ +F T+ +N+ ++Y+ E I A + + + K E LD+ V ENG + S GQRQ V + R LL+ +L+LDEAT+++DT ++ IQ +L + + TV+ IAHR++++ +D +L++ G + E S Sbjct: 340 GEVNVKDISFTYEGAEKPALSHVSFDIPRGKTVALVGRSGSGKSTIANLFTRFYDVDSGEIQLDGVDVRDYELKNLRTQFALVSQNVHLFNDTIANNIAYAAGDKYSREDIERAAELAHAMEFISKMENGLDTVVGENGASLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKNKTVLVIAHRLSTIEKADQILVIDDGAVVERGS 561
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_VIBVU (Lipid A export ATP-binding/permease protein msbA OS=Vibrio vulnificus GN=msbA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24 Identity = 66/222 (29.73%), Postives = 117/222 (52.70%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPL--EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G+++++D+ Y L +S P K +VGR+GSGKST+ R + + RT+ +++ Q+ +F T+ +N+ ++Y+ E I A + + + K E LD+ V ENG + S GQRQ V + R LL+ +L+LDEAT+++DT ++ IQ +L + + TV+ IAHR++++ +D +L++ G + E S Sbjct: 340 GEVNVKDISFTYEGAEKPALSHVSFDIPRGKTVALVGRSGSGKSTIANLFTRFYDVDSGEIQLDGVDVRDYELKNLRTQFALVSQNVHLFNDTIANNIAYAAGDKYSREDIERAAELAHAMEFISKMENGLDTMVGENGASLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKNKTVLVIAHRLSTIEKADQILVIDDGSVVERGS 561 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |