FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCC8_CRICR (ATP-binding cassette transporter sub-family C member 8 OS=Cricetus cricetus GN=ABCC8 PE=1 SV=3) HSP 1 Score: 188.734 bits (478), Expect = 2.493e-47 Identity = 95/224 (42.41%), Postives = 142/224 (63.39%), Query Frame = 1 Query: 22 SWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 693 +WP GKI +++L VRY + VL+ ++ +K GI GRTGSGKS+ FR+V+ R+RLSII QDPV+F GT+R N+DP ++ +D +WEAL+ QL V+ G LD+ +TE GEN+S GQRQL CL R +++ I ++DEATAS+D AT+N++Q+ + F+D TV+TIAHR+ +++ +D+V++L G I E+D Sbjct: 1338 NWPDQGKIQIQNLSVRYDSSLKPVLKHVNTLISPGQKIGICGRTGSGKSSFSLAFFRMVDMFEGRIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPEKKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVMVLKRGAILEFD 1561
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCC5_DICDI (ABC transporter C family member 5 OS=Dictyostelium discoideum GN=abcC5 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.252e-47 Identity = 99/235 (42.13%), Postives = 146/235 (62.13%), Query Frame = 1 Query: 7 SRPNHSWPSHGK------IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 693 +RP WPS I ++ + Y +P VL+GIS +K GI GRTGSGKS+L+ LFRIVE ++ R++L+IIPQ+PVMF GT+RSN+D L E+TD ++W+ L + QL + V+K + +NWS GQ+QL+ LGR LLK+ KIL+ DEATASVD+ +D LIQ+ +R+ F D ++TIAHR+ ++++SD +++L G I E++ Sbjct: 1192 NRPPMGWPSLTNSNHTPPIIFENVVMSYRQGLPAVLKGISFEIKAGEKIGICGRTGSGKSSLLLALFRIVELSSGRIIIDGLDISKIGLKDLRSQLAIIPQEPVMFTGTLRSNLDSLSEHTDSELWDVLKEIQLYEHVKKVSVADEGLDLRVNDNWSQGQKQLIGLGRALLKKPKILVCDEATASVDSLSDELIQRIIREKFKDAIILTIAHRLNTIVESDRIMVLDSGSIVEFN 1426
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCCF_DICDI (ABC transporter C family member 15 OS=Dictyostelium discoideum GN=abcC15 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.253e-47 Identity = 86/224 (38.39%), Postives = 145/224 (64.73%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 WPS G+I+ +++++RY P+ LR S +++ GI+GR+GSGKST+ +LFR++E ++ R+ + I+PQDP +F G++R N+DP +++TD +IWEAL K +L V KL+S V + G+ ++G +QL+CL R +L+ KI++ DEAT S+D T LI+Q++ ++F DCT++TIAH I +++DSD + ++ G + E+D+ Sbjct: 1187 WPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLV-QGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDT 1409
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MDR_LEITA (Multidrug resistance protein OS=Leishmania tarentolae GN=PGPA PE=3 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 8.019e-46 Identity = 96/221 (43.44%), Postives = 134/221 (60.63%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRK-ILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G + L +Q+RY +P VLRG+S +K GIVGRTGSGKSTL+ T R+VE R S+IPQDPV+F+GTVR NVDP E + ++W AL+ L + V + +DS+V E G N+S+GQRQL+C+ R LLKR +++DEATA++D A D IQ ++ FS TVITIAHR+ +V D ++++ HG++ E S Sbjct: 1284 GSLVLEGVQMRYREGLPLVLRGVSFQIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGVIHVNGREMSAYGLRDVRRHFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKRGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGVVAEMGS 1504 HSP 2 Score: 77.0258 bits (188), Expect = 1.057e-13 Identity = 52/198 (26.26%), Postives = 91/198 (45.96%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDT-ATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLI 681 +LR +S T P K T ++G TGSGKSTL+ L ++ +PQ + T+R N+ +E E + + + CQL ++ + G LD+++ E G N S GQ+ V L R + R + +LD+ +++D ++Q + T + H+I + +D +++L HG I Sbjct: 649 LLRNVSLTIPKGKLTMVIGSTGSGKSTLLGALM-------------GEYSVESGELWAERSIAYVPQQAWIMNATLRGNILFFDEERAEDLQDVIRCCQLEADLAQFCGGLDTEIGEMGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGQRIVQDVILGRLRGKTRVLATHQIHLLPLADYIVVLQHGSI 833
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: YOR1_YEAST (Oligomycin resistance ATP-dependent permease YOR1 OS=Saccharomyces cerevisiae GN=YOR1 PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.047e-45 Identity = 98/246 (39.84%), Postives = 143/246 (58.13%), Query Frame = 1 Query: 13 PNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALD-------------KCQLGDEVRKKEGK-----LDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 P SWPS G+I ++ Y P +P VL+ ++ +K GI GRTG+GKST++ L+R+ E A R +L+IIPQDPV+F GT+R N+DP E TD+++W+AL K Q DE GK LD V E G N+S+G+RQL+ L R L+++ KIL+LDEAT+SVD TD IQ + + F DCT++ IAHR+ ++++ D +L+L G + E+D+ Sbjct: 1203 PPESWPSMGEIIFENVDFAYRPGLPIVLKNLNLNIKSGEKIGICGRTGAGKSTIMSALYRLNELTAGKILIDNVDISQLGLFDLRRKLAIIPQDPVLFRGTIRKNLDPFNERTDDELWDALVRGGAIAKDDLPEVKLQKPDE-NGTHGKMHKFHLDQAVEEEGSNFSLGERQLLALTRALVRQSKILILDEATSSVDYETDGKIQTRIVEEFGDCTILCIAHRLKTIVNYDRILVLEKGEVAEFDT 1447
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP6_MOUSE (Multidrug resistance-associated protein 6 OS=Mus musculus GN=Abcc6 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.368e-45 Identity = 93/221 (42.08%), Postives = 138/221 (62.44%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 WP G+I+ RD +R+ P +P ++G+S +K GIVGRTG+GKS+L L R+ E A R+R++IIPQDPV+F G++R N+D L+E+TDE IW AL+ QL V G+L + G++ S+G +QL+CL R LL++ +IL+LDEATASVD T+ +Q +L + F+ CT++ IAHR+ SV+D VL++ G + E Sbjct: 1254 WPCGGQIEFRDFGLRHRPELPLAVQGVSLKIHAGEKVGIVGRTGAGKSSLAWGLLRLQEAAEGNIWIDGVPITHVGLHTLRSRITIIPQDPVLFPGSLRMNLDLLQEHTDEGIWAALETVQLKAFVTSLPGQLQYECAGQGDDLSVGHKQLLCLARALLRKTQILILDEATASVDPGTEMQMQAALERWFTQCTLLLIAHRLRSVMDCARVLVMDEGQVAE 1474
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP6_RAT (Multidrug resistance-associated protein 6 OS=Rattus norvegicus GN=Abcc6 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.980e-45 Identity = 94/224 (41.96%), Postives = 139/224 (62.05%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 WP G+I+ RD +R+ P +P ++G+S +K GIVGRTG+GKS+L L R+ E R+R++IIPQDPV+F G++R N+D L+E TDE IW AL+ QL V G+L + + G++ S+GQ+QL+CL R LL++ +IL+LDEATASVD T+ +Q +L + F+ CTV+ IAHR+ SV++ VL++ G + E S Sbjct: 1258 WPCGGQIEFRDFGLRHRPELPMAVQGVSLKIHAGEKVGIVGRTGAGKSSLTWGLLRLQEATEGGIWIDGVPITDMGLHTLRSRITIIPQDPVLFPGSLRMNLDLLQENTDEGIWAALETVQLKAFVTSLPGQLQYECSGQGDDLSVGQKQLLCLARALLRKTQILILDEATASVDPGTEIQMQAALERWFAQCTVLLIAHRLRSVMNCARVLVMDEGQVAESGS 1481
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCC1_DICDI (ABC transporter C family member 1 OS=Dictyostelium discoideum GN=abcC1 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.580e-44 Identity = 84/224 (37.50%), Postives = 137/224 (61.16%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 W + G+I+ R+++++Y L+ + + GIVGRTG+GKST+ LFR+VE + R+ L I+PQDP +F GT+R N+DP +YTD +IW AL+K +L + KL++ + E G+ S GQ+QL+CL R +LK K++++DEAT+ +D T +LI+Q++ F +CT++TIAHR+ ++IDS + ++ G + EYD+ Sbjct: 1110 WLTKGEIEFRNVEIKYGHSGESSLKNFTLKINQKDHIGIVGRTGAGKSTIGNGLFRMVECSKGSILIDGVDISKIGLHELRSSLGIVPQDPFIFSGTIRLNIDPFNKYTDSEIWVALEKVKLKSTISSMPLKLETMIEEGGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTSDLIKQTINNCFKNCTMLTIAHRLDTIIDSTKIAVIDKGKLIEYDT 1333
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB13C_ARATH (ABC transporter C family member 13 OS=Arabidopsis thaliana GN=ABCC13 PE=2 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 9.803e-44 Identity = 90/221 (40.72%), Postives = 135/221 (61.09%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 WP HG ++ ++ +RY +P L IS T G G++GRTG+GKS+++ LFR+ + R+ L+++PQ P +F+G++R N+DPL D +IWE LDKC++ V + G LDS V E+G ++S+GQRQL+CL R LLK KIL LDE TA++D T +L+ ++ TVITIAHRI++V+D D +L+L G++ E Sbjct: 952 WPVHGLVEFHNVTMRYISTLPPALTQISFTIQGGMHVGVIGRTGAGKSSILNALFRLTPVCSGEILVDGKNISHLPIRELRSCLAVVPQSPFLFQGSLRDNLDPLGLSEDWRIWEILDKCKVKAAV-ESVGGLDSYVKESGCSFSVGQRQLLCLARALLKSSKILCLDECTANIDVHTASLLHNTISSECKGVTVITIAHRISTVVDLDSILILDRGILVE 1171
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: NFT1_YEAST (ABC transporter NFT1 OS=Saccharomyces cerevisiae GN=NFT1 PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.725e-43 Identity = 93/246 (37.80%), Postives = 140/246 (56.91%), Query Frame = 1 Query: 13 PNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDE-------------------VRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 693 P +WP G ++L++L +RY+PH L +S K GIVGRTG+GKS++I ++R+ + R +S IPQDP +F+GTVRSN+DP + Y+D QI+ L K L +E +R + L++ V G N S GQRQL+CL R +L R I+++DEATAS+D +D IQ+++R+ + T++TIAHR+ SVID D +L++ G ++EYD Sbjct: 1275 PPANWPQTGDVELKNLSLRYSPHSSKALDNVSFKVKAGTKVGIVGRTGAGKSSIIAAIYRLSDWENGTITIDNKDIKHIPLERLRNSISCIPQDPTLFDGTVRSNLDPFDRYSDVQIYGVLSKVGLIEECDELCLIFEQEQPNFSSHKLRNRFIDLNTVVKSGGSNLSQGQRQLLCLARSMLGARNIMLIDEATASIDYISDAKIQKTIRETMKNTTILTIAHRLRSVIDYDKILVMEMGRVKEYD 1520 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |