FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RHOSR (Chaperone protein htpG OS=Rhodococcus sp. (strain RHA1) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.109e-29
Identity = 75/219 (34.25%), Postives = 120/219 (54.79%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEK---KMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            F + +K G+  D+ N+  L  +  + ST S +ELTSL+DYV RMK+GQ  I+Y TGES++ +E+SP +E  + KG+EVL + D +DE  VG + EF+GK   S  K  + LD  ED+K     +E  ++ F GL   + D L                P C+V   +  +  +ER+ +A      S      +K+ +E+NP +P++  LR+ A  ++N+
Sbjct:  390 FGRAVKEGLMSDTDNRDVLLGISSFASTHSEEELTSLEDYVARMKDGQEQIFYATGESRQLLESSPHMEAFRAKGFEVLLLTDPVDEMWVGAVPEFDGKSFQSIAKGEVDLDTEEDKKAHESEREEQEKDFAGLLSWMADALSEQVKEVRLSTRLTTSPACIVGDAFSMSPALERMYRA------SGQPVPVTKRILELNPTHPLVTGLRE-AHGERNE 601          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_STRCO (Chaperone protein htpG OS=Streptomyces coelicolor GN=htpG PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.449e-29
Identity = 79/220 (35.91%), Postives = 119/220 (54.09%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKK--MKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKS 658
            F   LK G+  DS N+  +     + ST   +E T+LKDYV RMKEGQ+DIYY+TGES++A+ENSP +E  + KG EVL + DA+DE  V  + E+EGK L S  K  + L  +E +K    KE   E++ GL   + + LG               P C+V+     T  +E + +A             +K+ +E+NPE+ +++ L  RA  D+ D++
Sbjct:  387 FGAVLKEGLVTDSDNRDAILAACSFASTHDAEEPTALKDYVERMKEGQDDIYYMTGESRQAIENSPHMEAFRAKGVEVLLLTDAVDEVWVDAVGEYEGKTLRSVAKGEIDLSGTEADKSDAEKEKQGEEYAGLLGWMTEHLGEEVKEVRLSSRLTVSPACVVSDAGELTPALENMYRAMGQE------VPGAKRILELNPEHQLVKSL-NRAWTDRQDRA 599          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_XANAC (Chaperone protein htpG OS=Xanthomonas axonopodis pv. citri GN=htpG PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.892e-29
Identity = 81/220 (36.82%), Postives = 114/220 (51.82%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGL---KLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F + LK G  ED  N+ K+A LLR+ ST   +G +   L DYV R+ +GQ+ +YY+TGES   +++SP LE  +KKG EVL + D IDE+ +  L EF+GK  V   +  L   KLD  ED+K  +E  K K EGL   IK  LG               P  L  G+      M ++++A      S      SK   E NP +P++E+L    D D+
Sbjct:  383 NFGQALKEGPAEDYANREKIAGLLRFSSTHDTTGAQSVGLADYVGRLADGQDKLYYLTGESYAQIKDSPHLEVFRKKGIEVLLLTDRIDEWLMSYLTEFDGKSFVDVARGDLDLGKLDSEEDKKAQEEVAKSK-EGLASRIKAALGDDVAELRVSHRLTDSPAILAIGQGDLGLQMRQLLEA------SGQAVPESKPVFEFNPTHPLIEKLDAEQDMDR 595          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_SHESW (Chaperone protein htpG OS=Shewanella sp. (strain W3-18-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.892e-29
Identity = 83/215 (38.60%), Postives = 114/215 (53.02%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F + LK G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQ  IYYI  +S  A  NSP LE L+KK  EVL M + IDE+ +  L E++ K+L S T+  L+L E ED  EK+ +E L E+   L + IK  LG               P C+VTGE   +  M ++M+A              K T E+NP +P++  L    D
Sbjct:  387 FGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYISRMKEGQTKIYYIVADSYDAAANSPHLELLRKKDIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLIERIKAALGTKVADVKVTSRLTDTPACVVTGEGEMSTQMIKLMQAAG------QPVPEVKPTFEVNPAHPLVSRLNDLQD 595          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ACISJ (Chaperone protein htpG OS=Acidovorax sp. (strain JS42) GN=htpG PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.892e-29
Identity = 78/210 (37.14%), Postives = 113/210 (53.81%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK--AQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            F   LK G+ ED  N+ +LA+LLR+ ST S     S  DY  RMKEGQ  IYYIT ++  A +NSP LE  KKKG EVL M D +DE+A+  L++F+G  L S  K  + L + +D  EKK  E   E F+ +   +K+ L                P CLV  + G +  + R++K   Q+  D        +K  +E+NPE+ ++++L
Sbjct:  409 FGAVLKEGLGEDFANRERLAKLLRFASTTSDTPSVSFADYKARMKEGQEAIYYITADTLAAAKNSPQLEVFKKKGIEVLLMTDRVDEWALNYLQDFDGTPLQSVAKGAVDLGKLQDEAEKKAAEEAAEAFKPMLAKLKEALKDKAEDVRVTTRLVDSPACLVVQDGGMSTQLARLLKQAGQSAPD--------AKPVLEVNPEHALVKKL 610          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_THICR (Chaperone protein htpG OS=Thiomicrospira crunogena (strain XCL-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.472e-29
Identity = 78/217 (35.94%), Postives = 113/217 (52.07%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELT---SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   +K G+ ED  NK K+A+LLR+ ST      T   SL+DY+ RM EGQ  IYYIT ++  A   SP LE  +KKG EVL + D IDE+ V  L EFEGK+L S T   LK  + E +K++ E  K+  E L + +K  +                P C+V+ E   +A+M R+M+               K  +E+NP++ ++++L    D  K
Sbjct:  382 FGNVMKEGVIEDFANKDKIAKLLRFSSTHESSGPTQRVSLQDYIDRMGEGQEAIYYITADTYAAATGSPHLEMFRKKGIEVLLLTDRIDEWLVSHLTEFEGKQLKSVTSADLKEFDEEADKELSEEDKKAREALTEKVKKAIEDQVSDVKITHRLTDSPACVVSAEGDISAHMARMMEQMG------QAMPKQKPVLELNPDHALVKKLDSLEDEPK 592          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_VIBVY (Chaperone protein htpG OS=Vibrio vulnificus (strain YJ016) GN=htpG PE=3 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.228e-29
Identity = 79/218 (36.24%), Postives = 118/218 (54.13%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE---KKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F   +K G  ED  N+ K+A LLR+ ST+  S ++  SL+ YV RMKEGQ+ IYY+T +S  A +NSP LE+ K KG EV+ M D IDE+ +  L EF+GK+  S TK GL L + EDE   +K KET +++F+ + +  K  LG               P  +VT ++     M +++ A              K   EINP + +++++   AD +
Sbjct:  386 FGLVMKEGPAEDYANREKVAALLRFASTEVDSAEQTVSLESYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGLEVILMFDRIDEWLMNYLTEFDGKQFQSITKAGLDLSQFEDEQEKEKQKET-EQEFQSVVERTKSYLGDRVKEVRTTFKLANTPAVVVTDDFEMGTQMAKLLAAAG------QAVPEVKYIFEINPNHTLVKQMADEADEE 596          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_XANCP (Chaperone protein htpG OS=Xanthomonas campestris pv. campestris GN=htpG PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.216e-29
Identity = 81/220 (36.82%), Postives = 114/220 (51.82%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGL---KLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F + LK G  ED  N+ K+A LLR+ ST   +G +  +L DYV RM EGQ+ +YY+TGES   +++SP LE  +KKG EVL + D IDE+ +  L EF+ K  V   +  L   KLD  ED+K  +E  K K EGL   IK  LG               P  L  G+      M ++++A      S      +K   E NP +P++E+L    D D+
Sbjct:  383 NFGQALKEGPAEDYANREKVAGLLRFSSTHDTTGAQSVALADYVGRMTEGQDKLYYLTGESYAQIKDSPHLEVFRKKGIEVLLLTDRIDEWLMSYLTEFDSKSFVDVARGDLDLGKLDSEEDKKAQEEVAKSK-EGLASRIKAALGDDVAEVRVSHRLTDSPAILAIGQGDLGLQMRQLLEA------SGQAVPETKPVFEFNPAHPLIEKLDAEQDMDR 595          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_XANC8 (Chaperone protein htpG OS=Xanthomonas campestris pv. campestris (strain 8004) GN=htpG PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.216e-29
Identity = 81/220 (36.82%), Postives = 114/220 (51.82%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGL---KLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F + LK G  ED  N+ K+A LLR+ ST   +G +  +L DYV RM EGQ+ +YY+TGES   +++SP LE  +KKG EVL + D IDE+ +  L EF+ K  V   +  L   KLD  ED+K  +E  K K EGL   IK  LG               P  L  G+      M ++++A      S      +K   E NP +P++E+L    D D+
Sbjct:  383 NFGQALKEGPAEDYANREKVAGLLRFSSTHDTTGAQSVALADYVGRMTEGQDKLYYLTGESYAQIKDSPHLEVFRKKGIEVLLLTDRIDEWLMSYLTEFDSKSFVDVARGDLDLGKLDSEEDKKAQEEVAKSK-EGLASRIKAALGDDVAEVRVSHRLTDSPAILAIGQGDLGLQMRQLLEA------SGQAVPETKPVFEFNPAHPLIEKLDAEQDMDR 595          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_SACD2 (Chaperone protein htpG OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=htpG PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.216e-29
Identity = 76/218 (34.86%), Postives = 118/218 (54.13%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F + LK G  ED  NK K+A+LLR+ +T   + ++  SL  Y+ RMKEGQ+ IYY+  E+    +NSP LE  +KKG EVL + + ID++ +G L E++GK+     K  L L   +SE++KK +E ++E      + +K  L                P CLV GE+   A M R+++A             SK  +EINP +P++++L +  D D+
Sbjct:  385 FGEVLKEGPAEDFANKEKIAKLLRFATTHKNTNEQDQSLDAYIERMKEGQDKIYYVVAENFNTAKNSPHLEVFRKKGIEVLLLSNRIDDWLMGHLMEYDGKQFQDVGKGSLDLGKLDSEEDKKEQEKVEEAMAPFVERMKAALAEQVEEVRITHRLTESPACLVVGEHDMGAQMRRLLEAAG------QAVPESKPIIEINPTHPLVQKLDQEQDEDR 596          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_RHOSR1.109e-2934.25Chaperone protein htpG OS=Rhodococcus sp. (strain ... [more]
HTPG_STRCO1.449e-2935.91Chaperone protein htpG OS=Streptomyces coelicolor ... [more]
HTPG_XANAC1.892e-2936.82Chaperone protein htpG OS=Xanthomonas axonopodis p... [more]
HTPG_SHESW1.892e-2938.60Chaperone protein htpG OS=Shewanella sp. (strain W... [more]
HTPG_ACISJ1.892e-2937.14Chaperone protein htpG OS=Acidovorax sp. (strain J... [more]
HTPG_THICR2.472e-2935.94Chaperone protein htpG OS=Thiomicrospira crunogena... [more]
HTPG_VIBVY3.228e-2936.24Chaperone protein htpG OS=Vibrio vulnificus (strai... [more]
HTPG_XANCP4.216e-2936.82Chaperone protein htpG OS=Xanthomonas campestris p... [more]
HTPG_XANC84.216e-2936.82Chaperone protein htpG OS=Xanthomonas campestris p... [more]
HTPG_SACD24.216e-2934.86Chaperone protein htpG OS=Saccharophagus degradans... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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