FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_PSYA2 (Chaperone protein htpG OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.791e-27
Identity = 70/208 (33.65%), Postives = 110/208 (52.88%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            F   +K G+ ED  N+ ++A+LLRY ++    E+TS +DY  RMK+GQ  IYY+T ++  A +NSP LE  KKKG EV+ M   +DE+A+  L  F+   L +  K  + L + +D  EK   E  +E  + +   +K  LG               P CLV GE   +  M +++K              SK T+E+NP++P++++L
Sbjct:  410 FGDVIKEGVGEDMGNQERIAKLLRYATSTQDGEMTSFEDYKARMKDGQKAIYYLTADNLAAAKNSPQLELFKKKGIEVILMTSRVDEWAMNFLTSFDETPLQNIAKGAVDLGDLQDEAEKAEAEKAQETMKPVVDKLKAALGDRAKDVKVSTRLVDSPACLVVGEGELSPQMIQMLKQMG------QDVPESKPTLEVNPDHPLIKKL 611          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RALEJ (Chaperone protein htpG OS=Ralstonia eutropha (strain JMP134) GN=htpG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26
Identity = 72/217 (33.18%), Postives = 121/217 (55.76%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F + LK G+ ED+ N+ ++A+LLR+ ST++   ++  SL  YV RMKEGQ+ IYY+T ++  A +NSP LE  +KKG EVL + D +DE+ +  L+EF+GK+LVS  +  L L     E EK  +E  + +++ +    K VL                  CLV+ E   +  ++R++K    +         ++  +E+NPE+ ++++LR   + D
Sbjct:  387 FGQALKEGLGEDNANQERIAKLLRFASTQNDNAEQSVSLAAYVGRMKEGQDKIYYVTADTWAAAKNSPHLEVFRKKGIEVLLLTDRVDEWMLSFLREFDGKELVSVARGDLDLGSLADEAEKAEQEKAETEWKDVVARAKTVLEGKAKDVRVTLRLTASASCLVSDEGDMSGYLQRLLKQAGQK------APDAQPILELNPEHALVKKLRDLPEGD 597          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HS905_HUMAN (Putative heat shock protein HSP 90-alpha A5 OS=Homo sapiens GN=HSP90AA5P PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26
Identity = 64/130 (49.23%), Postives = 85/130 (65.38%), Query Frame = 2
Query:   32 HEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVL 421
            H+  TN  +    +++ S +   +L  LKD    MK  Q  IYYITGE+K  V NS F+E L+K G EV+YM++ ID+Y V QLKE E K +VS  KEGL+L E E+EKK +E  K KFE LCK++KD+L
Sbjct:  137 HQSLTNNWEDHLAVKHFSVEG--QLEELKDSRRVMKANQKHIYYITGETKDQVANSAFVECLQKHGLEVIYMIELIDKYCVQQLKELESKTVVSVAKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDML 264          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CHRSD (Chaperone protein htpG OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.499e-26
Identity = 77/221 (34.84%), Postives = 110/221 (49.77%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            +F   LK G  ED  N+ K+A+LLR+ ST+  S  +  SL  YV+RMKEGQ  IYY+  +   A  +SP LE  +KKG EVL + D IDE+ +  L E++GK      K  L LD+   E+EKK +E   +    L + +K  LG               P C+V  E+     M R+M+A              K  +E+NPE+ ++  L    D+  ND
Sbjct:  385 AFGNVLKEGPAEDFANRDKIADLLRFSSTQTDSATQDQSLAGYVSRMKEGQQKIYYLVADGFNAASHSPHLEIFRKKGIEVLLLHDRIDEWLMSHLTEYDGKAFADVAKGDLDLDDMADEEEKKAQEETAKAKAPLIERVKTALGDEVQEVRITHRLTDSPACVVLSEHDMGYQMRRLMEAAG------QPLPEVKPILELNPEHSLVARLEGADDSVFND 599          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_PASMU (Chaperone protein htpG OS=Pasteurella multocida GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26
Identity = 80/219 (36.53%), Postives = 117/219 (53.42%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL----DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA--QALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G  ED  NK  +A+LLR+ ST   S  +  SL+DYV RMKEGQ  IYYIT ++  A +NSP LE   KKG EVL + D IDE+ +  L EF+GK L + +K  L L    D+ ED +K ++   E++    + +K +LG               P  + TG+   T  M ++  A  QA+ +         K T E+NPE+ +++++ + AD
Sbjct:  381 FGLVLKEGPAEDFANKETIAKLLRFASTHNDSSQQSVSLEDYVARMKEGQKAIYYITADTYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKPLQTISKADLDLGDLADKEEDSQKAQD---EQYASFVERVKTLLGERVKEVRLTHRLTDTPAVVSTGDDQMTTQMAKLFAAAGQAMPE--------VKYTFELNPEHGLVQKVAEIAD 588          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_HAEPS (Chaperone protein htpG OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26
Identity = 76/222 (34.23%), Postives = 116/222 (52.25%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD-ADKND 652
            +F   LK G+ ED  NK ++A L+R+ ST   S ++  SL DY+ RMKEGQ  IY++T +S +A +NSP LE   KKG EVL + D IDE+ +  L EF+GK L S TK  L L +   ++E++ ++  + +F    +  K  LG               P  + T     T  M ++  A   +   +      K T E+NPE+ +++ +   AD A+ ND
Sbjct:  380 AFGLVLKEGVGEDFANKNQVAALVRFASTHTDSSEQAVSLSDYIARMKEGQKAIYFLTADSYQAAKNSPHLELFNKKGIEVLLLSDRIDEWFISHLTEFDGKPLQSITKSDLDLGDLADKEEEETQKVQEAEFASFLERAKGYLGERVKKVVLTHRLTDTPAVVSTDSDEMTTQMAKLFAAMGQQAPEV------KYTFELNPEHSMVKRIADIADEAEFND 595          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BURXL (Chaperone protein htpG OS=Burkholderia xenovorans (strain LB400) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26
Identity = 72/209 (34.45%), Postives = 116/209 (55.50%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            F + LK GI ED  N+ ++A+LLR+ ST +   ++  SL DYV RMK  Q  IYY+T ++ +A  +SP LE  +KKG EVL + D +DE+ +  L EFEGK L S  +  L L   +++EK+ +E + E+F+ L + +K+ L                P CLV  +   +  ++R++KA   +  S          +E+NPE+ +++ L
Sbjct:  385 FGQVLKEGIGEDFANRERIAKLLRFASTHTDTPEQTVSLADYVARMKPEQTKIYYVTADTWQAATHSPHLEVFRKKGVEVLLLTDRVDEWILSFLTEFEGKPLQSVARGDLDLGALNDEEKEAQEKVSEEFKPLVEKMKEALKDKAKDVRLTFRLTDSPSCLVADDGEMSGYLQRMLKAAGQQAPSF------HPILEVNPEHALVKGL 587          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BACSU (Chaperone protein htpG OS=Bacillus subtilis GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26
Identity = 74/222 (33.33%), Postives = 119/222 (53.60%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVT-GEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSV 661
            SF + LK G++ D   NK +L +LL ++S+K   +L SL +YV+RM E Q  IYY TG+S   +E  P  E +  KGYE+LY  + IDE+A+  L  ++ K+  S +   L +D  ED+K+ +E  + K++ L + +K++L                P CL   GE   T  ME+I+ A     N     + ++K +EINP + + + L+   + DK   S+
Sbjct:  382 SFGRQLKFGVYNDFGANKDQLKDLLLFYSSKE-KKLVSLDEYVSRMPEEQKFIYYATGDSYDRIEKLPQTEMVADKGYEILYFTEDIDEFAIKMLASYQEKEFKSVSSGDLGIDTDEDQKQSEEE-ESKYKDLFEEMKNILSDKVKNVRISKRLKSHPVCLAADGEV--TIEMEKILNAMPDSQN-----VKAEKVLEINPNHEVFQTLQDAFEQDKEKLSL 594          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ROSDO (Chaperone protein htpG OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26
Identity = 75/228 (32.89%), Postives = 118/228 (51.75%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE----KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRA--DADKNDKSVKD 667
            +F   LK G+ ED   + ++ E+ R+ STKSGD +TSL DY++R KEGQ+ IYYI G+  + +  SP LE  + K  EVL + D +DE+ +  + EFEGK   S T+    LD+  + +K  +  +E        L   +K  LG               P CL+  E     N+ER++K      ++M       + +E+NP++ I+ +L +RA   A  +D  +KD
Sbjct:  366 NFGPVLKEGLIEDPALRDRILEICRFSSTKSGD-VTSLADYISRCKEGQDAIYYIAGDDARKIAQSPHLEGFRAKDVEVLLLSDHVDEFWLQHITEFEGKPFKSITRGAADLDKINEGEKADDAEEEAQAPDLNDLIAALKLELGASVKDVRPSKRLTDSPVCLIADEGDIDVNLERMLKRHGQLQDAM------PRVLELNPDHRIITKLAERAKGSAAASDTLLKD 586          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_PSYCK (Chaperone protein htpG OS=Psychrobacter cryohalolentis (strain K5) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26
Identity = 70/208 (33.65%), Postives = 108/208 (51.92%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            F   +K G+ ED  N+ ++A+LLRY ++      TS +DY  RMKEGQ  IYY+T ++  A +NSP LE  KKKG EV+ M   +DE+A+  L  F+   L +  K  + L + +D  EK   E  +E  + +   +K  LG               P CLV GE   +  M +++K              SK T+E+NP++P++++L
Sbjct:  420 FGDVIKEGVGEDMGNQERIAKLLRYATSTQDSVTTSFEDYKARMKEGQKAIYYLTADNLAAAKNSPQLELFKKKGIEVILMTSRVDEWAMNFLTSFDETPLQNIAKGAVDLGDLQDEAEKAEAEKAQETMKPIVDKLKTALGERAKDVKVSTRLVDSPACLVVGEGELSPQMIQMLKQMG------QDVPESKPTLEVNPDHPLIKKL 621          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_PSYA28.791e-2733.65Chaperone protein htpG OS=Psychrobacter arcticus (... [more]
HTPG_RALEJ1.148e-2633.18Chaperone protein htpG OS=Ralstonia eutropha (stra... [more]
HS905_HUMAN1.148e-2649.23Putative heat shock protein HSP 90-alpha A5 OS=Hom... [more]
HTPG_CHRSD1.499e-2634.84Chaperone protein htpG OS=Chromohalobacter salexig... [more]
HTPG_PASMU1.958e-2636.53Chaperone protein htpG OS=Pasteurella multocida GN... [more]
HTPG_HAEPS1.958e-2634.23Chaperone protein htpG OS=Haemophilus parasuis ser... [more]
HTPG_BURXL1.958e-2634.45Chaperone protein htpG OS=Burkholderia xenovorans ... [more]
HTPG_BACSU1.958e-2633.33Chaperone protein htpG OS=Bacillus subtilis GN=htp... [more]
HTPG_ROSDO2.558e-2632.89Chaperone protein htpG OS=Roseobacter denitrifican... [more]
HTPG_PSYCK2.558e-2633.65Chaperone protein htpG OS=Psychrobacter cryohalole... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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