FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ACTP7 (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25
Identity = 71/215 (33.02%), Postives = 110/215 (51.16%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G+ ED  NK ++A L R+ ST+  S ++  SL DYV RMKEGQ  IY++T +S  A +NSP LE   KKG EVL + D IDE+ VG L EF+GK L S TK  L L +   +++++ ++  + +F    +  +   G               P  + T     T  M ++  A   +   +      K T E+NP++ +++++    D
Sbjct:  379 FGLVLKEGVGEDFANKQQIASLFRFASTQTDSSEQTVSLADYVGRMKEGQKAIYFLTADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWVVGHLTEFDGKPLQSITKSDLDLGDLADKEQEESQKAQQAEFGSFLERAQSYFGERVKKVVLTHRLTDTPAVVSTDNDEMTTQMAKLFAAMGQKAPEV------KYTFELNPDHRMVKKIADLTD 587          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BUCAI (Chaperone protein htpG OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=htpG PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.075e-24
Identity = 74/210 (35.24%), Postives = 107/210 (50.95%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKM--KETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            F   LK G  ED  N  K+A LLR+ S KS   ++  SLK+Y++ M E Q  IYYIT +S  +  NSP LE  KK   +VL + D IDE+ +  L EFEGKK  S +KE + L++   EKK+  K+   E  E L K +K++LG               PC L++     T  M ++  A              K   EINP++ +++++
Sbjct:  378 FGLVLKEGPAEDHENLNKIANLLRFTSMKSNNSEQKMSLKEYISNMNEQQEKIYYITADSYSSANNSPHLELFKKNNIDVLLLSDRIDEWMMNYLSEFEGKKFQSISKEDISLNKLTKEKKIKNKDVSTEMIEFL-KKVKNILGNQVKDVRLTHRLTETPCVLLSDSTEMTTQMAKLFSAAG------QSVPELKYIFEINPDHILIKKI 580          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ACTSZ (Chaperone protein htpG OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=htpG PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.075e-24
Identity = 74/217 (34.10%), Postives = 109/217 (50.23%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESED--EKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAG--YMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G+ ED  N+ ++A+L R+ ST   S ++  SL DY+ RMKEGQ  +YYIT +S  A +NSP LE   KKG EVL + D IDE+ +  L EF+GK L S TK  L L +  D  E + ++   E   G  + +K +LG               P  + T     T  M ++         +M+G      K T E+NP++ ++++     D
Sbjct:  381 FGLVLKEGVGEDFANREQIAKLFRFASTHTDSSEQSVSLADYIARMKEGQKAVYYITADSYVAAKNSPHLELFNKKGIEVLLLSDRIDEWMLSYLTEFDGKPLQSITKADLDLGDLADKTEAEKEKAQDEALSGFIERVKTLLGERVKDVRLTHRLTDTPAVVSTDNDQMTTQMAKLF--------AMSGQPVPEVKYTFELNPDHALVKKTAALTD 589          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSA (Chaperone protein htpG OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=htpG PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.403e-24
Identity = 75/227 (33.04%), Postives = 112/227 (49.34%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEG-----LKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 667
            +F   LK GI+ED   KT + EL R+ ST  GD LT+L DYV RMK+GQ+ IY ITG+    ++ SP LE    KG EVL + D IDE+ V  ++ +  K   S    G     +K  E  ++KK  E   ++   L + +K  LG                 CLV  E   + ++E++++A     N   G     + +EINP + +++ L  R  A   D  ++D
Sbjct:  367 AFGPVLKEGIYEDFERKTDILELCRFRSTH-GDGLTTLADYVARMKDGQDAIYTITGDDLDQLKKSPQLEGFAAKGVEVLLLTDPIDEFWVSAVRSYAEKDFRSVAAAGADLSKVKAPEGAEDKKADEAPADELTTLIEAVKLALGERVKDVRPSERLTESAVCLVAAEGEMSMHLEKMLRAH----NQAPG--ERARILEINPRHALIKGLAARVKAGGTDAGLED 586          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BUCAP (Chaperone protein htpG OS=Buchnera aphidicola subsp. Schizaphis graminum GN=htpG PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.833e-24
Identity = 75/223 (33.63%), Postives = 114/223 (51.12%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVK 664
            F   LK G  EDS N   +A LLR+ S +  S ++  SL+ Y++ M E Q  IYYIT +S  + +NSP LE   KK  +VL + D IDE+ +  L EFEGKK  S +KE L L++ +++ +  KET  E  E L K +K  LG               PC +++     +  M ++  A              K   EINPE+ +++++ K  + +K D+ +K
Sbjct:  379 FGSVLKEGPAEDSNNLNLIASLLRFTSIQNNSSEQNISLEKYISNMHEKQEKIYYITADSYTSAKNSPHLELFNKKNIDVLLLSDRIDEWMMNYLTEFEGKKFQSISKEDLSLNKLTKENENKKETSTEMIEFL-KKVKKTLGDKVKSVRLTYRLTETPCIVLSDSNEMSTQMAKLFSAAG------QSVPELKYIFEINPEHKLIQKICKIKENEKFDEWIK 594          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_WOLSU (Chaperone protein htpG OS=Wolinella succinogenes GN=htpG PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.394e-24
Identity = 66/214 (30.84%), Postives = 111/214 (51.87%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F + LK G++ D  NK KL EL+R+HS+ S ++  SL+ Y  RMKEGQ  IYY+ GE+   ++NSP LEK KK+  EVL+  + ID   +  + ++    L +      + D+  +E+ + E  KE+F+ L +  +  L                P C+V  E      M ++M+      N++  +   K  +E+NPE+P++ +L    D ++
Sbjct:  372 FGRALKEGLYGDFENKEKLLELMRFHSSLSPNKKISLQSYKERMKEGQKAIYYLMGENADLLQNSPLLEKFKKREIEVLFFDEEIDSIVMPMVNQYGDLPLKAI--NSAEADKDFEEESVSEEEKERFKPLLERFEKALSGEIKSVRLSKRLVDSPACVVADEDDPNFAMIKMMRQMG---NALGDFPEPKPILELNPEHPMVGKLLALEDEER 580          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ENT38 (Chaperone protein htpG OS=Enterobacter sp. (strain 638) GN=htpG PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.127e-24
Identity = 83/225 (36.89%), Postives = 116/225 (51.56%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE---KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA--QALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKS 658
            F   LK G  EDS N   +A+LLR+ ST   S ++  SL+DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S  K    +D+  DE  + ET KE     E   + +K +LG               P  + T        M ++  A  QA+ +         K   E+NP++P++    KRA AD  D++
Sbjct:  378 FGLVLKEGPAEDSGNVESIAKLLRFASTHTDSSEQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIDKLADE--VDETAKEAEKALEPFVERVKTLLGDRVKEVRFTHRLTDTPAIVTTDADEMGTQMAKLFAAAGQAMPE--------VKYIFELNPDHPLV----KRA-ADTQDEA 587          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RALME (Chaperone protein htpG OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.083e-24
Identity = 69/217 (31.80%), Postives = 116/217 (53.46%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            F + LK G+ ED  N  ++A+LLR+ +T   + ++  SL DYV RMKEGQ+ IYY+T ++  A ++SP LE  +KKG EV+ + D +DE+ +  L EF+GK+LVS  +  L L     E EK  +E     ++ +    K VL                  CLV+ +   +  ++R++K    +         ++  +E+NPE+ ++++LR   D +
Sbjct:  387 FGQVLKEGVGEDHGNGERIAKLLRFATTHGDTAEQSVSLVDYVGRMKEGQDKIYYVTADTWVAAKSSPHLEVFRKKGIEVVLLTDRVDEWLLSYLHEFDGKQLVSVARGDLDLGALADEAEKAEQEKASADWKEVVDRAKSVLEGKAKDVRVTLRLTDSASCLVSDDGDMSGYLQRLLKQAGQK------APDAQPILELNPEHALVKKLRDLPDGE 597          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_YERE8 (Chaperone protein htpG OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.333e-24
Identity = 73/214 (34.11%), Postives = 109/214 (50.93%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G  ED +NK  +A+LLR+ ST   S  +  SL+DYV+RM EGQ  IYYIT +S  A +NSP LE  +KKG EVL + D IDE+ +  L EF+GK   S +K    L++  DE++ ++   +K  E   + +K +LG               P  + T     +  M ++  A   +   +      K   E+NPE+ +++     AD
Sbjct:  378 FGMALKEGPAEDGSNKDTIAKLLRFASTHTDSSAQTVSLEDYVSRMAEGQEKIYYITADSYAAAKNSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFDGKAFQSVSKADDSLNKLADEERPEQQEADKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQQAPEV------KYIFELNPEHSLVKRAADVAD 585          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RHILO (Chaperone protein htpG OS=Rhizobium loti GN=htpG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.333e-24
Identity = 71/225 (31.56%), Postives = 107/225 (47.56%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE---SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 667
            +F   LK G++ED   + +L +L R+HST SG+    L DYV  MKEGQ  I+++ G+ +  +E SP LE  K +G EVL + D +D + V    +F+GK   S T+   +L +    +D KK       + +G    +K  LG                 CLV  E+G     ER+M A    D       ++K  +EINP +   E +   A     D++ KD
Sbjct:  374 NFGVVLKEGLYEDYERREQLLKLARFHSTASGEGWRGLADYVAAMKEGQKAIFFMAGDDRARLEASPQLEGFKARGIEVLLLTDPVDSFWVTMAPDFDGKPFKSVTQGVAELSDIPLLDDAKKPDTAAAPEVDGFLAFVKSALGDAVSDVKASDRLTESAVCLVAPEHGPDRQFERLMNAAGRLDK------AAKPILEINPRH---ERVLALAGLGDEDQAFKD 589          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_ACTP78.228e-2533.02Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HTPG_BUCAI1.075e-2435.24Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_ACTSZ1.075e-2434.10Chaperone protein htpG OS=Actinobacillus succinoge... [more]
HTPG_MAGSA1.403e-2433.04Chaperone protein htpG OS=Magnetospirillum magneti... [more]
HTPG_BUCAP1.833e-2433.63Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_WOLSU2.394e-2430.84Chaperone protein htpG OS=Wolinella succinogenes G... [more]
HTPG_ENT383.127e-2436.89Chaperone protein htpG OS=Enterobacter sp. (strain... [more]
HTPG_RALME4.083e-2431.80Chaperone protein htpG OS=Ralstonia metallidurans ... [more]
HTPG_YERE85.333e-2434.11Chaperone protein htpG OS=Yersinia enterocolitica ... [more]
HTPG_RHILO5.333e-2431.56Chaperone protein htpG OS=Rhizobium loti GN=htpG P... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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