FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_SERP5 (Chaperone protein htpG OS=Serratia proteamaculans (strain 568) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.965e-24
Identity = 71/219 (32.42%), Postives = 113/219 (51.60%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            F   LK G  ED+ NK  +A+LLR+ ST+S    +  SL++YV RM EGQ  IYYIT +S  A ++SP LE  +KKG EVL + D IDE+ +  L EF+GK   S +K    LD+  DE + ++  +++ E     +K +LG               P  ++T     +  M ++  A      ++      K   E+NPE+ +   +++ +D   N++
Sbjct:  378 FGLVLKEGPAEDANNKETIAKLLRFASTQSESSAQTVSLEEYVGRMAEGQEKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFDGKPFQSVSKADDALDKLADETEEQKAAEKQLEPFVDRVKTLLGDRVKDVRLTHRLTDTPAIVITDADEMSTQMAKLFAAAGQEAPAV------KYIFELNPEHAL---VKRASDVGDNEQ 587          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_PELLD (Chaperone protein htpG OS=Pelodictyon luteolum (strain DSM 273) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.965e-24
Identity = 71/223 (31.84%), Postives = 117/223 (52.47%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVK 664
            +F   +K+G++ D TN+ KL ELLR+ STK+G+ E  +LK+Y  RM   Q +IYY +G  +  +  +P LE  + KG EVL + D +D + +  + E++ K+L S  K    +D S+  K   E + E     L K+ ++ LG               P  LV+G+    + MER+MK   ++    AG    +K +E+NP +PI+  L     A+ N+  ++
Sbjct:  373 AFGPIVKIGLNTDFTNRDKLIELLRFESTKTGEGEYVTLKEYAARMAPDQKEIYYHSGAGRAQLLANPNLEYFQDKGIEVLLLSDPVDVFVIPSIHEYDKKQLKSIEK--ADIDFSKATKDKTEPIAENLLVPLLKIFRETLGEGIEDVVESHRLVSSPVTLVSGKDAMDSQMERMMK--MMQQEMPAG----RKILEVNPSHPIIRNLSGMMMANDNNPLIR 587          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CLOPE (Chaperone protein htpG OS=Clostridium perfringens GN=htpG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.552e-23
Identity = 69/219 (31.51%), Postives = 113/219 (51.60%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            SF + LK G+++D   NK +L +LL ++S+K   ++ SL +YV RM E Q  IYY  GES + +E  P  E +  KGYE+LY  + +DE+A+  L  ++ K+  S +   L ++  E+ KK  E  K    G+ + +K+ LG               P CL + E   +  ME+I+ A           + ++K +E+N  + +   L+   DA +NDK
Sbjct:  382 SFGRQLKYGVYDDFGMNKDELKDLLMFYSSKE-KKMVSLAEYVERMAEDQKYIYYAVGESNERIEKMPQTEMVLDKGYEILYFTEDVDEFAIKMLMNYKEKEFKSVSSGDLGIESEEENKKENEENK----GIFEAMKEALGEKISAVKASSRLKNYPVCL-SSEGEVSIEMEKILSAMPNNQG-----VKAQKVLEVNTNHEVFNSLK---DALENDK 586          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CLOP1 (Chaperone protein htpG OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.552e-23
Identity = 69/219 (31.51%), Postives = 113/219 (51.60%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            SF + LK G+++D   NK +L +LL ++S+K   ++ SL +YV RM E Q  IYY  GES + +E  P  E +  KGYE+LY  + +DE+A+  L  ++ K+  S +   L ++  E+ KK  E  K    G+ + +K+ LG               P CL + E   +  ME+I+ A           + ++K +E+N  + +   L+   DA +NDK
Sbjct:  382 SFGRQLKYGVYDDFGMNKDELKDLLMFYSSKE-KKMVSLAEYVERMAEDQKYIYYAVGESNERIEKMPQTEMVLDKGYEILYFTEDVDEFAIKMLMNYKEKEFKSVSSGDLGIESEEENKKENEENK----GIFEAMKEALGEKISAVKASSRLKNYPVCL-SSEGEVSIEMEKILSAMPNNQG-----VKAQKVLEVNTNHEVFNSLK---DALENDK 586          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CHLTE (Chaperone protein htpG OS=Chlorobium tepidum GN=htpG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.552e-23
Identity = 70/208 (33.65%), Postives = 111/208 (53.37%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   LK+G++ D TN+ KL +LLR+ +TK+ + E  +LK+YV RM EGQ +IYY +G S+  +   P LE  +K+  EVL + D +D + +  + E++ K L S  K   ++D S  E + +    E   G+  + K+VLG               P  LV+G+    +  E++MK      N  A   S+KK +EIN  +PI+  L
Sbjct:  376 AFGTILKIGLNTDFTNRDKLIDLLRFETTKTVEGEYVTLKEYVGRMAEGQTEIYYHSGSSRAQMLAHPNLEYFRKRDIEVLLLSDPVDVFVIPSIFEYDKKPLKSIEK--AEIDMSTVEPEGERLSAEGTVGVISLFKEVLGERVADVVESRRLVSSPVTLVSGKDALDSQFEKMMKMM----NKDADMPSTKKILEINTAHPIIRNL 577          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ARCB4 (Chaperone protein htpG OS=Arcobacter butzleri (strain RM4018) GN=htpG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.027e-23
Identity = 77/216 (35.65%), Postives = 113/216 (52.31%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYM----VDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            + + LK G+++D TNK  + ELLRY S+K+   ++TSL+ Y  R    Q  IYYI GE++K + NSP LE  KK   EVL +    +D I   A+G  KE+E K + +   E  K+++SE+EKK    ++EKF+ +   IKD LG               P C+V       A+ +    A   R    A    S   +EINPE+ I+++L   AD
Sbjct:  390 YIRPLKEGVYQDYTNKEAILELLRYKSSKTEAGKMTSLEAYKERANSEQKAIYYIVGENEKVLRNSPLLESYKKNDIEVLILDDKEIDEIITPAIGAFKEWEFKDITAI--EPPKVEQSEEEKK---EVEEKFQDILSKIKDKLGDAVKDVKVTSRLSESPSCVVKD----AADAQMAAMAHMFRAMGQA-MPESAPILEINPEHEIVKKLNGCAD 595          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_YERPS (Chaperone protein htpG OS=Yersinia pseudotuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.457e-23
Identity = 72/214 (33.64%), Postives = 108/214 (50.47%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G  ED +NK  +A+LLR+ ST   S  +  SL+DYV+RM EGQ  IYYIT +S  A ++SP LE  +KKG EVL + D IDE+ +  L EFEGK   S +K    L++  DE+  ++   EK  E   + +K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++   +  D
Sbjct:  378 FGMALKEGPAEDGSNKETIAKLLRFASTHTDSSAQTVSLEDYVSRMAEGQEKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQQAPEV------KYIFELNPDHGLVKRAAEVTD 585          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_YERPP (Chaperone protein htpG OS=Yersinia pestis (strain Pestoides F) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.457e-23
Identity = 72/214 (33.64%), Postives = 108/214 (50.47%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G  ED +NK  +A+LLR+ ST   S  +  SL+DYV+RM EGQ  IYYIT +S  A ++SP LE  +KKG EVL + D IDE+ +  L EFEGK   S +K    L++  DE+  ++   EK  E   + +K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++   +  D
Sbjct:  378 FGMALKEGPAEDGSNKETIAKLLRFASTHTDSSAQTVSLEDYVSRMAEGQEKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQQAPEV------KYIFELNPDHGLVKRAAEVTD 585          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_YERPN (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.457e-23
Identity = 72/214 (33.64%), Postives = 108/214 (50.47%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G  ED +NK  +A+LLR+ ST   S  +  SL+DYV+RM EGQ  IYYIT +S  A ++SP LE  +KKG EVL + D IDE+ +  L EFEGK   S +K    L++  DE+  ++   EK  E   + +K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++   +  D
Sbjct:  378 FGMALKEGPAEDGSNKETIAKLLRFASTHTDSSAQTVSLEDYVSRMAEGQEKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQQAPEV------KYIFELNPDHGLVKRAAEVTD 585          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_YERPE (Chaperone protein htpG OS=Yersinia pestis GN=htpG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.457e-23
Identity = 72/214 (33.64%), Postives = 108/214 (50.47%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G  ED +NK  +A+LLR+ ST   S  +  SL+DYV+RM EGQ  IYYIT +S  A ++SP LE  +KKG EVL + D IDE+ +  L EFEGK   S +K    L++  DE+  ++   EK  E   + +K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++   +  D
Sbjct:  376 FGMALKEGPAEDGSNKETIAKLLRFASTHTDSSAQTVSLEDYVSRMAEGQEKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQQAPEV------KYIFELNPDHGLVKRAAEVTD 583          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_SERP56.965e-2432.42Chaperone protein htpG OS=Serratia proteamaculans ... [more]
HTPG_PELLD6.965e-2431.84Chaperone protein htpG OS=Pelodictyon luteolum (st... [more]
HTPG_CLOPE1.552e-2331.51Chaperone protein htpG OS=Clostridium perfringens ... [more]
HTPG_CLOP11.552e-2331.51Chaperone protein htpG OS=Clostridium perfringens ... [more]
HTPG_CHLTE1.552e-2333.65Chaperone protein htpG OS=Chlorobium tepidum GN=ht... [more]
HTPG_ARCB42.027e-2335.65Chaperone protein htpG OS=Arcobacter butzleri (str... [more]
HTPG_YERPS3.457e-2333.64Chaperone protein htpG OS=Yersinia pseudotuberculo... [more]
HTPG_YERPP3.457e-2333.64Chaperone protein htpG OS=Yersinia pestis (strain ... [more]
HTPG_YERPN3.457e-2333.64Chaperone protein htpG OS=Yersinia pestis bv. Anti... [more]
HTPG_YERPE3.457e-2333.64Chaperone protein htpG OS=Yersinia pestis GN=htpG ... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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