FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_YERPA (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.457e-23
Identity = 72/214 (33.64%), Postives = 108/214 (50.47%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G  ED +NK  +A+LLR+ ST   S  +  SL+DYV+RM EGQ  IYYIT +S  A ++SP LE  +KKG EVL + D IDE+ +  L EFEGK   S +K    L++  DE+  ++   EK  E   + +K +LG               P  + T     +  M ++  A   +   +      K   E+NP++ +++   +  D
Sbjct:  378 FGMALKEGPAEDGSNKETIAKLLRFASTHTDSSAQTVSLEDYVSRMAEGQEKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFEGKAFQSVSKADDSLNKLADEENPEQQEAEKALEPFVERVKTLLGERVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAGQQAPEV------KYIFELNPDHGLVKRAAEVTD 585          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CLOPS (Chaperone protein htpG OS=Clostridium perfringens (strain SM101 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.457e-23
Identity = 68/219 (31.05%), Postives = 113/219 (51.60%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            SF + LK G+++D   NK +L +LL ++S+K   ++ SL +YV RM E Q  IYY  GES + +E  P  E +  KGYE+LY  + +DE+A+  L  ++ K+  S +   L ++  E+ KK  E  K    G+ + +K+ LG               P CL + E   +  ME+I+ A           + ++K +E+N  + +   L+   DA +ND+
Sbjct:  382 SFGRQLKYGVYDDFGMNKDELKDLLMFYSSKE-KKMVSLAEYVERMAEDQKYIYYAVGESNERIEKMPQTEMVLDKGYEILYFTEDVDEFAIKMLMNYKEKEFKSVSSGDLGIESEEENKKENEENK----GIFEAMKEALGEKISAVKASSRLKNYPVCL-SSEGEVSIEMEKILSAMPNNQG-----VKAQKVLEVNTNHEVFNSLK---DALENDR 586          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_DESDG (Chaperone protein htpG OS=Desulfovibrio desulfuricans (strain G20) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.515e-23
Identity = 69/215 (32.09%), Postives = 115/215 (53.49%), Query Frame = 2
Query:   32 HEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEY---AVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK----FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRK--RADAD 643
            + D  N+ K   LLR++S+   DE  L SL DY+ R +EGQ  ++Y++  +++A   +P +E  ++KG EVLY+ +A DE+   ++G+  EFE +    A  + LK  +  ++K   E L E+       L   +K +LG               P CL + + G TA+ME++M+    +D S+      +K +EINP++P+   L +  RADAD
Sbjct:  379 YNDYINRDKFIPLLRFNSSALDDEKGLCSLDDYIGRAREGQKTVWYVSAPNREAARLNPHVEIFRRKGIEVLYLYEAADEFIMESLGKWNEFEFRSAEHADADALKDFDDVEKKDAPEALDEEGRKTLSSLLSHMKTLLGDKVEDVRESARLSDSPACLASKDGGMTASMEKLMRVMN-KDESV-----PRKVLEINPDHPLTRNLLRLYRADAD 587          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBJ (Chaperone protein htpG OS=Clostridium botulinum (strain Kyoto / Type A2) GN=htpG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.515e-23
Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            SF + LK G++ D  +NK  L +LL ++S+K   ++ +L +YV+RM E Q  IYY  GES + +E  P +E +  KGYEVLY  D IDE+A+  L  ++ K+  S +   L ++  E E       KE  E L + +KD+L                P CL   E   +  ME+++ A     N     + + K +EIN  + + + L++  + DK
Sbjct:  382 SFGRQLKYGVYSDFGSNKDILQDLLMFYSSKE-KKMVTLAEYVSRMPEDQKYIYYAVGESNERIEKLPQIEGVLDKGYEVLYFTDDIDEFAIKMLMNYKEKEFKSVSSGDLGIEGEEKENTSNSDDKENKE-LFESMKDILSGKVKDVRASKRLKNHPVCL-ANEGELSIEMEKVLNAMPNNQN-----IKADKVLEINMNHDVFKSLKEAYEGDK 589          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBL (Chaperone protein htpG OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.896e-23
Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            SF + LK G++ D  +NK  L +LL ++S+K   ++ +L +YV+RM E Q  IYY  GES + +E  P +E +  KGYEVLY  D IDE+A+  L  ++ K+  S +   L ++  E E       KE  E L + +KD+L                P CL   E   +  ME+++ A     N     + + K +EIN  + + + L++  + DK
Sbjct:  382 SFGRQLKYGVYSDFGSNKDILQDLLMFYSSKE-KKMVTLAEYVSRMPEDQKYIYYAVGESNERIEKLPQIEGVLDKGYEVLYFTDDIDEFAIKMLMNYKEKEFKSVSSGDLGIEGEEKENTSSSDDKENKE-LFESMKDILSGKVKDVRASKRLKNHPVCL-ANEGELSIEMEKVLNAMPNNQN-----IKADKVLEININHDVFKSLKEAYEGDK 589          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBK (Chaperone protein htpG OS=Clostridium botulinum (strain Okra / Type B1) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.896e-23
Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            SF + LK G++ D  +NK  L +LL ++S+K   ++ +L +YV+RM E Q  IYY  GES + +E  P +E +  KGYEVLY  D IDE+A+  L  ++ K+  S +   L ++  E E       KE  E L + +KD+L                P CL   E   +  ME+++ A     N     + + K +EIN  + + + L++  + DK
Sbjct:  382 SFGRQLKYGVYSDFGSNKDILQDLLMFYSSKE-KKMVTLAEYVSRMPEDQKYIYYAVGESNERIEKLPQIEGVLDKGYEVLYFTDDIDEFAIKMLMNYKEKEFKSVSSGDLGIEGEEKENTSSSDDKENKE-LFESMKDILSGKVKDVRASKRLKNHPVCL-ANEGELSIEMEKVLNAMPNNQN-----IKADKVLEININHDVFKSLKEAYEGDK 589          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CLOAB (Chaperone protein htpG OS=Clostridium acetobutylicum GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.896e-23
Identity = 73/222 (32.88%), Postives = 117/222 (52.70%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVK 664
            SF + LK G++ D  +NK  L +LL ++S+    +L +L +YV+RMKE Q  IYY  GES + +E  P  E +K KGYE+LY  D +DE+A+  L +++ K+  S + + L  +  E E K KET  E+ + L   +K+VL                P CL + +   +  ME+++K     +N     + ++K +EIN  + +   + K A  D  DK  K
Sbjct:  382 SFGRQLKYGVYSDFGSNKEVLQDLLMFYSSTE-KKLVTLDEYVSRMKEDQKYIYYAAGESNEKIEKLPQTEVVKDKGYEILYFTDDVDEFAIKMLMKYKEKEFKSVSNKDLGFEADEKESK-KET--EENKDLFDFMKEVLDGKVKEVRASSRLKSHPVCL-SNDGELSIEMEKVLKMMPDNNN-----VKAEKILEINTNHEMFNSI-KAAFKDDKDKLKK 592          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ALKOO (Chaperone protein htpG OS=Alkaliphilus oremlandii (strain OhILAs) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.896e-23
Identity = 74/221 (33.48%), Postives = 120/221 (54.30%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMK-ETL--KEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            +F + LK GI+ +  +NK  L +LL ++S+K   +L +L +Y++RM E Q  IYY TGESK+ +E  P  E + +KG+E+LY+ + IDE+A+  L  ++ K+  S +   L +++SE EK  + E L  KE FE +  ++ D +                P CL   E   +  ME+I+ A    +N     + + K +EIN  + + E L+   DA KND
Sbjct:  382 AFGRQLKYGIYSEFGSNKDVLQDLLLFYSSKE-KKLVTLDEYISRMSEEQKYIYYATGESKERIEKLPQTELVSEKGFEILYLTEDIDEFAIKVLMSYKDKEFKSVSSSDLGIEDSETEKNTETEELENKELFEKMTALLSDKV----TAVRISKRLKSHPVCL-ANEGEISIEMEKILSAMPNNEN-----IKANKILEINGNHQVFEVLK---DAYKND 588          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBM (Chaperone protein htpG OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23
Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            SF + LK G++ D  +NK  L +LL ++S+K   ++ +L +YV+RM E Q  IYY  GES + +E  P +E +  KGYEVLY  D IDE+A+  L  ++ K+  S +   L ++  E E       KE  E L + +KD+L                P CL   E   +  ME+++ A     N     + + K +EIN  + + + L++  + DK
Sbjct:  382 SFGRQLKYGVYSDFGSNKDILQDLLMFYSSKE-KKMVTLAEYVSRMPEDQKYIYYAVGESNERIEKLPQIEGVLDKGYEVLYFTDDIDEFAIKMLMNYKEKEFKSVSSGDLGIEGEEKENTSSSDDKENKE-LFESMKDILSGKVKDVRASKRLKNHPVCL-ANEGELSIEMEKVLNAMPNNQN-----IKADKVLEININHDVFKPLKEAYEGDK 589          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ERWCT (Chaperone protein htpG OS=Erwinia carotovora subsp. atroseptica GN=htpG PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.006e-22
Identity = 73/221 (33.03%), Postives = 118/221 (53.39%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKS 658
            F   LK G  ED +N+  +A+LLR+ +T+S    +  SL+DYV+RM EGQ+ IYYIT +S  A ++SP LE  +KKG EVL + + IDE+ +  L EF+GK   S +K    LD+ +++E   ++  ++  E   + +K +LG               P  +VT     +  M ++  A   +   +      K   E+NPE+ ++    KRA AD +D++
Sbjct:  381 FGLVLKEGPAEDGSNREAIAKLLRFATTQSDSSAQTVSLEDYVSRMVEGQDKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSERIDEWMMSYLTEFDGKSFQSVSKADDTLDKLADEENDAQKEAQKALEPFVERVKTLLGERVKDVRFTYRLTDTPAIVVTDADEMSTQMAKLFAAAGQQAPEV------KYIFELNPEHALI----KRA-ADVSDEA 590          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_YERPA3.457e-2333.64Chaperone protein htpG OS=Yersinia pestis bv. Anti... [more]
HTPG_CLOPS3.457e-2331.05Chaperone protein htpG OS=Clostridium perfringens ... [more]
HTPG_DESDG4.515e-2332.09Chaperone protein htpG OS=Desulfovibrio desulfuric... [more]
HTPG_CLOBJ4.515e-2331.94Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOBL5.896e-2331.94Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOBK5.896e-2331.94Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOAB5.896e-2332.88Chaperone protein htpG OS=Clostridium acetobutylic... [more]
HTPG_ALKOO5.896e-2333.48Chaperone protein htpG OS=Alkaliphilus oremlandii ... [more]
HTPG_CLOBM7.701e-2331.94Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_ERWCT1.006e-2233.03Chaperone protein htpG OS=Erwinia carotovora subsp... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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