FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CLOBH (Chaperone protein htpG OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.006e-22
Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            SF + LK G++ D  +NK  L +LL ++S+K   ++ +L +YV+RM E Q  IYY  GES + +E  P +E +  KGYEVLY  D IDE+A+  L  ++ K+  S +   L ++  E E       KE  E L + +KD+L                P CL   E   +  ME+++ A     N     + + K +EIN  + + + L++  + DK
Sbjct:  382 SFGRQLKYGVYSDFGSNKDILQDLLMFYSSKE-KKMVTLAEYVSRMPEDQKYIYYAVGESNERIEKLPQIEGVLDKGYEVLYFTDDIDEFAIKMLMSYKEKEFKSVSSGDLGIEGEEKENTSNSDDKENKE-LFESMKDMLSGKVKDVRASKRLKNHPVCL-ANEGELSIEMEKVLNAMPNNQN-----IKADKVLEININHDVFKSLKEAYEGDK 589          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CLOB1 (Chaperone protein htpG OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.006e-22
Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            SF + LK G++ D  +NK  L +LL ++S+K   ++ +L +YV+RM E Q  IYY  GES + +E  P +E +  KGYEVLY  D IDE+A+  L  ++ K+  S +   L ++  E E       KE  E L + +KD+L                P CL   E   +  ME+++ A     N     + + K +EIN  + + + L++  + DK
Sbjct:  382 SFGRQLKYGVYSDFGSNKDILQDLLMFYSSKE-KKMVTLAEYVSRMPEDQKYIYYAVGESNERIEKLPQIEGVLDKGYEVLYFTDDIDEFAIKMLMSYKEKEFKSVSSGDLGIEGEEKENTSNSDDKENKE-LFESMKDMLSGKVKDVRASKRLKNHPVCL-ANEGELSIEMEKVLNAMPNNQN-----IKADKVLEININHDVFKSLKEAYEGDK 589          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ENTS8 (Chaperone protein htpG OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=htpG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22
Identity = 74/216 (34.26%), Postives = 105/216 (48.61%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE---KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G  EDS N+  +A+LLR+ ST   S  +  SL DYV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S  K    L++  DE  + E+ KE     E   + +K +LG               P  + T     +  M ++  A              K   E+NP++ +++      D
Sbjct:  378 FGLVLKEGPAEDSANQEAIAKLLRFASTHTDSAAQTVSLADYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMSYLTEFDGKAFQSVAKADESLEKLADE--VDESAKEAEKALEPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDNDEMSTQMAKLFAAAG------QAVPEVKYIFELNPDHQLVKRTADTQD 585          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CLOB6 (Chaperone protein htpG OS=Clostridium botulinum (strain 657 / Type Ba4) GN=htpG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22
Identity = 67/216 (31.02%), Postives = 113/216 (52.31%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            SF + LK G++ D  +NK  L +LL ++S+K   ++ +L +YV+RM E Q  IYY  GES + +E  P +E +  KGYEVLY  D IDE+A+  L  ++ K+  S +   L + E E+++    +  +K + L + +KD+L                P CL   E   +  ME+++ A     N     + + K +EIN  + + + L++  + DK
Sbjct:  382 SFGRQLKYGVYSDFGSNKDILQDLLMFYSSKE-KKMVTLAEYVSRMPEEQKYIYYAVGESNERIEKLPQIEGVLDKGYEVLYFTDDIDEFAIKMLMNYKEKEFKSVSSGDLGI-EGEEKENTSNSDDKKNKELFESMKDILSGKVKDVRASKRLKNHPVCL-ANEGELSIEMEKVLNAMPNNQN-----IKADKVLEININHDVFKSLKEAYEGDK 589          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_SALTY (Chaperone protein htpG OS=Salmonella typhimurium GN=htpG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22
Identity = 75/224 (33.48%), Postives = 107/224 (47.77%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 667
            F   LK G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A +NSP LE L+KKG EVL + D IDE+ +  L EF+GK   S  K    +++  DE        EK  E   + +K +LG               P  + T     +  M ++  A              K   E+NP++ ++    KR    K++   K+
Sbjct:  378 FGLVLKEGPAEDHANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKNSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKALEPFVERVKTLLGDRVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAG------QSVPEVKYIFELNPDHVLV----KRTADTKDEAQFKE 591          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_SALTI (Chaperone protein htpG OS=Salmonella typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22
Identity = 75/224 (33.48%), Postives = 107/224 (47.77%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 667
            F   LK G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A +NSP LE L+KKG EVL + D IDE+ +  L EF+GK   S  K    +++  DE        EK  E   + +K +LG               P  + T     +  M ++  A              K   E+NP++ ++    KR    K++   K+
Sbjct:  378 FGLVLKEGPAEDHANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKNSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKALEPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAG------QSVPEVKYIFELNPDHVLV----KRTADTKDEAQFKE 591          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_SALCH (Chaperone protein htpG OS=Salmonella choleraesuis GN=htpG PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22
Identity = 75/224 (33.48%), Postives = 107/224 (47.77%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 667
            F   LK G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A +NSP LE L+KKG EVL + D IDE+ +  L EF+GK   S  K    +++  DE        EK  E   + +K +LG               P  + T     +  M ++  A              K   E+NP++ ++    KR    K++   K+
Sbjct:  378 FGLVLKEGPAEDHANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKNSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKVLEPFVERVKTLLGDRVKDVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAG------QSVPEVKYIFELNPDHVLV----KRTADTKDEAQFKE 591          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_SALPB (Chaperone protein htpG OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=htpG PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.926e-22
Identity = 72/214 (33.64%), Postives = 102/214 (47.66%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A +NSP LE L+KKG EVL + D IDE+ +  L EF+GK   S  K    +++  DE        EK  E   + +K +LG               P  + T     +  M ++  A              K   E+NP++ +++      D
Sbjct:  378 FGLVLKEGPAEDHANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKNSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKALEPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAG------QSVPEVKYIFELNPDHVLVKRTADTED 585          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_SALPA (Chaperone protein htpG OS=Salmonella paratyphi A GN=htpG PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.926e-22
Identity = 72/214 (33.64%), Postives = 102/214 (47.66%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G  ED  N+  +A+LLR+ ST   S  +  SL+DYV+RMKEGQ  IYYIT +S  A +NSP LE L+KKG EVL + D IDE+ +  L EF+GK   S  K    +++  DE        EK  E   + +K +LG               P  + T     +  M ++  A              K   E+NP++ +++      D
Sbjct:  378 FGLVLKEGPAEDHANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKNSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKAFQSVAKADESIEKLADEVDENAKEAEKALEPFVERVKTLLGDRVKEVRLTHRLTDTPAIVTTDADEMSTQMAKLFAAAG------QSVPEVKYIFELNPDHVLVKRTADTED 585          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_PROVI (Chaperone protein htpG OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=htpG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.822e-22
Identity = 66/210 (31.43%), Postives = 111/210 (52.86%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL--DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   +K+G++ D TN+ KL ELLR+ STK+G+ E  +LK+YV RM   Q +IYY +G  +  +  +P LE  + +G EVL + D +D + +  + E++ K+L S  K  +    +++E E+ + E L      L    ++ LG               P  +V G+    + MER+MK   +    M    ++KK +E+NP +PI+  L
Sbjct:  373 AFGPIVKIGLNTDFTNRDKLIELLRFESTKTGEGEFVTLKEYVARMGGEQKEIYYHSGAGRAQLLANPNLEYFQSRGIEVLLLSDPVDVFVIPSIHEYDSKQLKSIEKADIDFSKEKTEGEEPVAENL---LVPLLAKFREALGEDIADVVESHRLVSSPVTIVGGKDAMDSQMERMMK---MMQQEMP---AAKKVLEVNPRHPIIRNL 573          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_CLOBH1.006e-2231.94Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_CLOB11.006e-2231.94Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_ENTS81.716e-2234.26Chaperone protein htpG OS=Enterobacter sakazakii (... [more]
HTPG_CLOB61.716e-2231.02Chaperone protein htpG OS=Clostridium botulinum (s... [more]
HTPG_SALTY2.241e-2233.48Chaperone protein htpG OS=Salmonella typhimurium G... [more]
HTPG_SALTI2.241e-2233.48Chaperone protein htpG OS=Salmonella typhi GN=htpG... [more]
HTPG_SALCH2.241e-2233.48Chaperone protein htpG OS=Salmonella choleraesuis ... [more]
HTPG_SALPB2.926e-2233.64Chaperone protein htpG OS=Salmonella paratyphi B (... [more]
HTPG_SALPA2.926e-2233.64Chaperone protein htpG OS=Salmonella paratyphi A G... [more]
HTPG_PROVI3.822e-2231.43Chaperone protein htpG OS=Prosthecochloris vibriof... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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