FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_HELAH (Chaperone protein htpG OS=Helicobacter acinonychis (strain Sheeba) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21
Identity = 71/218 (32.57%), Postives = 110/218 (50.46%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT-KEGLK---LDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F K LK G++ D  NK KL ELLR++S K  ++L SLK+Y   +KE Q  IYY+ GE+   ++ SP LEK  +KGY+VL + D ID + +  + E++      A+  E LK   L+E  DE      +K +F+ L K  ++ L                    +T       + +  M A  +R         SKKT+E+NP + I+++L K  D ++
Sbjct:  382 FGKVLKEGLYGDFENKEKLLELLRFYS-KDKEKLISLKEYKENLKENQKSIYYLLGENLDLLKASPILEKYAQKGYDVLLLSDEIDAFVMPSVNEYDKMPFRDASHSESLKELGLEEINDE------VKNQFKDLIKAFEENLKDEIKGVELSSH--------LTSAVALIGDEQNAMMANLMRQMGQ-NMPESKKTLELNPNHAILQKLLKCEDKEQ 583          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_EHRCJ (Chaperone protein htpG OS=Ehrlichia canis (strain Jake) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21
Identity = 67/218 (30.73%), Postives = 103/218 (47.25%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTN--KTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEG--------LKLDESEDEKKMKE-TLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   LK G+ E      + +L    R++ST S D L SL+DY+ RMKEGQ++IYY+TG    +++ SP LE    +G EV+ ++D +D++    + +++   L S  +          LK DE   E K +    KEK +   K    VL                P CL   +      MER      LR+     Y S+ K +EINP++PI+  +
Sbjct:  375 NFGSVLKEGLCESMNTEFREELLSACRFYSTNSDDSLISLEDYIERMKEGQDNIYYLTGNDLDSIKKSPQLEGFVSRGIEVILLIDPVDDFWTNVVTDYQRVPLKSVIRADEDLEKLAHLKKDEEVGESKDENPDSKEKVDAFVKYAIQVLDKLVSGVRVSKKLTNSPVCLAVADGSMDIRMERF-----LREQKQLNYKST-KILEINPKHPIVSRM 586          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_HELPH (Chaperone protein htpG OS=Helicobacter pylori (strain HPAG1) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.229e-20
Identity = 71/218 (32.57%), Postives = 112/218 (51.38%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT-KEGLK---LDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F K LK G++ D  NK KL ELLR++S K  ++L SLK+Y   +KE Q  IYY+ GE+   ++ SP LEK  +KGY+VL + D ID + +  + E++      A+  E LK   L+E  DE      +K++F+ L K  ++ L                    +T       + +  M A  +R    +    SKKT+E+NP + I+++L K  D ++
Sbjct:  382 FGKVLKEGLYGDFENKEKLLELLRFYS-KDKEKLISLKEYRENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTPFRDASHSESLKELGLEEINDE------VKDQFKDLMKAFEENLKDEIKGVELSSH--------LTSAVALIGDEQNAMMANFMRQMGQS-VPESKKTLELNPNHAILQKLLKCEDKEQ 583          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_GLUOX (Chaperone protein htpG OS=Gluconobacter oxydans GN=htpG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.606e-20
Identity = 69/222 (31.08%), Postives = 116/222 (52.25%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 667
            +F   +K G+ ED+ ++T++A   R+HST S D+L +L DY++RMK+GQ+ IYY+TG+S  A+++S  LE  + +G EVL + D +D +   +L  ++ K L S T     L++ E   +   T     E L   +KD LG                  ++T + G    M+R+M+       S     +    +EINP++P+++ L +R       +SVKD
Sbjct:  377 NFGAVIKEGLWEDAEHRTEIAGFARFHSTYS-DDLITLDDYISRMKDGQDAIYYLTGDSLDALKSSAQLEGFRARGLEVLLLSDPVDGFWPERLSSYQEKPLRSVTHSHGDLEKFE-SVEADTTEAADVEKLVPALKDALG-DQVKDVRSTVRLTGSAVVITSDGGPDLTMQRLMR------RSGQAMPAMPPILEINPKHPLIKALAERV---AKGESVKD 586          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RICPR (Chaperone protein htpG OS=Rickettsia prowazekii GN=htpG PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.097e-20
Identity = 60/211 (28.44%), Postives = 108/211 (51.18%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   LK G+ E +T+  KL E+  + S    +++ S+ +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT+  + ++++  + K K T  +K +   K++    K++LG               P CL   +      MER +  Q    N      +S K +E+NP+N I+E++
Sbjct:  369 NFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISIDEYIANFKEGQNTIYYLSGDNPDKLLSSPQIEGLLNKNIDVLLFTDTVDDFWVNVNSEYKGYAIKSATRSDIDVEQTTSQPKDKNTDSKKSDNEYKLLTDYFKEILGELVKEVKISKKLTLSPACLAVSDTAMDIRMERFLIEQKQIAN------ASAKNLELNPKNKIIEKI 572          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_DESVH (Chaperone protein htpG OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=htpG PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.097e-20
Identity = 72/228 (31.58%), Postives = 115/228 (50.44%), Query Frame = 2
Query:   11 KNLKLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQL---KEFEGKKLVSATKEGLKLDE----SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 667
            K  KLG + D  N+ K A LLR++S+   D   LTSL DY++R +EGQ +I+YI    ++A    P +E  ++KG EVLY+++ IDE+ +  L    +F  K +  A  E L   E    + D   + E     F  L + +K +LG               P CLV      T++M+R+++    +D S+      +K  E+N ++PI+  L K   +D +D  V+D
Sbjct:  374 KVFKLG-YSDYANREKFAPLLRFNSSHHDDAQGLTSLDDYISRAREGQKEIWYIAAPGREAARLDPRVEVFRRKGLEVLYLLEPIDEFVLETLDSYSDFSFKAVEHADGEKLAQFEDTGPARDVTPLTEDEDAAFARLIERMKALLGDAVEDVRISHRLADSPACLVQPGGASTSSMDRLLRV-LHKDESV-----PRKVFEVNRDHPILRNLLKVFTSDASDPLVED 594          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPA (Chaperone protein htpG OS=Rhodopseudomonas palustris GN=htpG PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20
Identity = 68/212 (32.08%), Postives = 103/212 (48.58%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD-----ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   LK G++ED   + KL  L R+  T +  E  SLK YV  MKE Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      +F GK L S ++  +  D     E + +K  K+  K     +  VIKD LG                 CLV G  G    +E+++     R N  AG   SK  +EIN ++P++  L
Sbjct:  375 AFGPVLKEGLYEDFERREKLLSLARF--TTTAGEKRSLKQYVEAMKENQTEIYYLVGDSLERLKSNPKLESATARGIEVLLLTDPVDAFWTSGQLDFGGKPLKSLSQGDVNFDLIPKLEQDQDKDNKDEAKVDEATVIAVIKDALGERVSDVKASQRLTSSASCLVAGGMGPDRELEKLL----ARANKGAG---SKPILEINLQHPLVAAL 577          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_EHRCR (Chaperone protein htpG OS=Ehrlichia chaffeensis (strain Arkansas) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20
Identity = 69/218 (31.65%), Postives = 109/218 (50.00%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTN--KTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATK--EGLK----LDESEDEKKMKE---TLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   LK G+ E      + +L    R++ST S D L SL+DY+ RMK GQ++IYY+TG    +V+ SP LE    +G EV+ +VD +D++    + +++   L S  +  E L+    LD+SE+ K+ ++     KEK +   K    VL                P CL   +      MER      LR+     Y S+ K +EINP++PI+ ++
Sbjct:  375 NFGSVLKEGLCESMNTEFREELMSACRFYSTYSDDSLISLEDYIERMKAGQDNIYYLTGNDLDSVKKSPQLEGFISRGIEVILLVDPVDDFWTNVVTDYQKVPLKSVIRADEDLEKLAHLDKSEEIKENEDESVDSKEKVDTFVKYAAQVLDKLVSSVRVSKKLTNSPVCLAVADGSMDIRMERF-----LREQKQLNYKST-KILEINPKHPIVTKM 586          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BORBU (Chaperone protein htpG OS=Borrelia burgdorferi GN=htpG PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20
Identity = 64/217 (29.49%), Postives = 108/217 (49.77%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            F + +K G++ D  N+ KL  L+R+ S+ S D   S K+Y  RM E Q  IYYITG  +  ++ +P +   K+KG+E+L M D +DE  +  + E+EG KL +  K     +E +DE   K  ++E+F+     +K++L                P  ++      T  M++IM +       +      K  +E+NP N I++ L K  + +K +K
Sbjct:  375 FGRCIKEGVYSDFENREKLISLIRFKSS-SVDGFVSFKEYKERMNESQKSIYYITGGKENILKENPIVAAYKEKGFEILIMDDELDEAILNLIPEYEGLKLKAINKNETS-NELKDENFKK--IEEEFKDTLTKVKEILKDHIKEVNLSATLIKEPSAIIIDSNDPTYQMQKIMLSMGQEVKEI------KPILELNPNNKIVQNL-KNLEPEKLEK 580          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BAUCH (Chaperone protein htpG OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20
Identity = 65/209 (31.10%), Postives = 103/209 (49.28%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKE-TLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            F   +K G+ ED  N   +A LLR+ +T  KS ++  SL +YV+R+ E Q  IYYI  +S  A  +SP LE L+KKG EVL + + ID + +  L EF GK     +K  LKLD+  +E   ++  + + FE   + +K  LG               P  +       T +M +++ A       +      K   E+NP +PI++++
Sbjct:  380 FGLVIKEGLAEDPNNSKSIARLLRFSTTHSKSMEQNVSLDEYVSRIAEQQEKIYYIIADSYAAANSSPHLELLQKKGIEVLLLHERIDAWMMNYLIEFNGKSFQLVSKADLKLDKFLNENTTEQKDMTKAFEPFIERVKKYLGDRIKEVRLTYSLTDTPAIVTIDSNNMTTHMAKLIVASGQNKPDI------KYIFELNPLHPIVKKV 582          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_HELAH9.414e-2132.57Chaperone protein htpG OS=Helicobacter acinonychis... [more]
HTPG_EHRCJ9.414e-2130.73Chaperone protein htpG OS=Ehrlichia canis (strain ... [more]
HTPG_HELPH1.229e-2032.57Chaperone protein htpG OS=Helicobacter pylori (str... [more]
HTPG_GLUOX1.606e-2031.08Chaperone protein htpG OS=Gluconobacter oxydans GN... [more]
HTPG_RICPR2.097e-2028.44Chaperone protein htpG OS=Rickettsia prowazekii GN... [more]
HTPG_DESVH2.097e-2031.58Chaperone protein htpG OS=Desulfovibrio vulgaris (... [more]
HTPG_RHOPA2.739e-2032.08Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_EHRCR2.739e-2031.65Chaperone protein htpG OS=Ehrlichia chaffeensis (s... [more]
HTPG_BORBU2.739e-2029.49Chaperone protein htpG OS=Borrelia burgdorferi GN=... [more]
HTPG_BAUCH7.969e-2031.10Chaperone protein htpG OS=Baumannia cicadellinicol... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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