FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CLOTE (Chaperone protein htpG OS=Clostridium tetani GN=htpG PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 63/218 (28.90%), Postives = 108/218 (49.54%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD-ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 649
            +F + LK G++ D   NK  L +L+ ++S+    +L +L +YV+RMK+ Q  IYY  GE+   +E  P  E ++ KGYE+LY  D +DE+A+  L  ++ K+  S   + L  + E ++E+K  +  KE FE     +KDVL                P CL       +  ME+++      +N     + + K +EIN  + +   ++     DK+
Sbjct:  382 NFGRQLKYGVYSDFGANKEVLQDLIMFYSSTE-KKLVTLDEYVSRMKDDQKYIYYAPGENIDKIEKLPQTEIVRDKGYEILYFADEVDEFAIKMLMNYKEKEFKSVYSKDLGFEAEEKEEQKENDENKEVFE----FMKDVLNGKVKEVRASKRLKSHPVCLANAS-DISIEMEKVLSMMPNNEN-----IKADKILEINTNHNMFNTIKSAFKDDKD 588          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CHLCH (Chaperone protein htpG OS=Chlorobium chlorochromatii (strain CaD3) GN=htpG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19
Identity = 61/222 (27.48%), Postives = 109/222 (49.10%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVK 664
            +F   +K+G++ D TN+ KL ELLR+ STK+ + E  +L++YV RM   Q +IYY +G ++  +   P +E  ++ G EVL + D +D + +  + EF+ K L S  K      + +   K +         + +  K+ L                P  LV+G+    + +ER+MK   + +  M     +K+ +E+N  +PI+  +     AD N+  +K
Sbjct:  377 AFGPIIKIGLNTDFTNREKLIELLRFESTKTEEGEFVTLREYVERMGSEQKEIYYHSGNNRAQLLAHPNIEYFREHGIEVLLLSDPVDMFVIPSIHEFDKKPLKSIEKADCDFSQ-QSSNKAEPVAPNLLNPVLQAFKEALSNEVEDVVESRRLVSSPVTLVSGKDAIDSQLERMMK---MMNTPMP---PAKRILEVNSSHPIVRNIAGMIMADANNPLIK 591          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_HELPJ (Chaperone protein htpG OS=Helicobacter pylori J99 GN=htpG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.775e-19
Identity = 71/218 (32.57%), Postives = 108/218 (49.54%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT-KEGLK---LDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F K LK G++ D  NK KL ELLR++S   G E  SLK+Y   +KE Q  IYY+ GE+   ++ SP LEK  +KGY+VL + D ID + +  + E++      A+  E LK   L E  DE      +K++F+ L K  ++ L                    +T       +    M A  +R    +    SKKT+E+NP + I+++L K  D ++
Sbjct:  382 FGKVLKEGLYGDFENKEKLLELLRFYSKDKG-EWISLKEYKENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTPFRDASHSESLKELGLAEIHDE------VKDQFKDLIKAFEENLKDEIKGVELSGH--------LTSAVALIGDEPNAMMANWMRQMGQS-VPESKKTLELNPNHAILQKLLKCEDKEQ 583          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_EHRRG (Chaperone protein htpG OS=Ehrlichia ruminantium (strain Gardel) GN=htpG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.775e-19
Identity = 67/218 (30.73%), Postives = 103/218 (47.25%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTN--KTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATK--EGL-------KLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   LK G+ E      + +L  + R++ST S D L SL+DY+ RMK  QN+IYY+TG    +++ SP LE    +G EVL +VD +D++    + +++   L S  +  E L       K DES+D +      KEK +        VL                P CL   +      MER      LR+     Y S+ K +EIN ++PI+ ++
Sbjct:  376 NFGSVLKEGLCESMNTEFREELISVCRFYSTHSNDSLISLEDYIERMKPEQNNIYYLTGNDLDSIKKSPQLEGFVSRGVEVLLLVDPVDDFWTNVVTDYQKVPLRSVIRADEDLEKFSDVEKGDESKDSQNEDTQSKEKVDKFIGYAAQVLNNLVSNVRVSKKLTDSPVCLAVADGSMDIRMERF-----LREQKQLNYKST-KILEINSKHPIISKM 587          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_OCEIH (Chaperone protein htpG OS=Oceanobacillus iheyensis GN=htpG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19
Identity = 68/219 (31.05%), Postives = 113/219 (51.60%), Query Frame = 2
Query:    2 SFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            +F + +K G++ D   NK +L +LL ++S+K   +L +L++YV+ M E Q  IYY TG+S+  +E  P  E +  KGYE+LY  D IDE+A+  L  ++ K+  S +   L ++  EDEK+  E        L   +K+VL                P  L T +   +  ME+I+   A+ D+     + + K +EIN  + I + L K A  + ++K
Sbjct:  382 AFGQQIKFGVYSDYGQNKDELKDLLLFYSSKE-KKLVTLEEYVSCMPEDQKYIYYATGDSRDRIEKLPQTELVADKGYEILYFTDEIDEFAIKMLMNYDEKEFRSVSSGDLGIE--EDEKEENEQENNDNAELFTAMKEVLSTKVKDVRASKRLKSHPVVL-TADGEISLEMEKII--NAMPDDQQ---IQADKVLEINVNHDIFQSL-KAAQGNDDEK 590          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RICFE (Chaperone protein htpG OS=Rickettsia felis GN=htpG PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.028e-19
Identity = 60/211 (28.44%), Postives = 110/211 (52.13%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLK--EKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT+  + +++  S+ E+K  ++ K  ++++ L    K+ LG               P CL   +      MER +    +    +A   +S K +E+NP+N I+E++
Sbjct:  369 NFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIAGFKEGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVEQTTSQSEEKNADSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFL----IEQKQIAA--ASAKNLELNPKNKIIEKI 572          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RICTY (Chaperone protein htpG OS=Rickettsia typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19
Identity = 58/211 (27.49%), Postives = 107/211 (50.71%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   LK G+ E +T+  KL E+  + S    +++ S+ +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT+  + ++ +    + K T  +K +   K++    K++LG               P CL   +      MER +    +    +A   +S K +E+NP+N I+E++
Sbjct:  369 NFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISIDEYIANFKEGQNTIYYLSGDNPDKLLSSPQIEGLLNKNIDVLLFTDTVDDFWVNVNSEYKGYAIKSATRSDIDVEHTTSRPQDKNTDSKKSDDEYKLLTDYFKEILGELVKEVKISKKLTLSPACLAVSDTAMDIRMERFL----IEQKQIAS--ASAKNLELNPKNKIIEKI 572          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_EHRRW (Chaperone protein htpG OS=Ehrlichia ruminantium (strain Welgevonden) GN=htpG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19
Identity = 66/218 (30.28%), Postives = 103/218 (47.25%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTN--KTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATK--EGL-------KLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   LK G+ E      + +L  + R++ST S D L SL+DY+ RMK  QN+IYY+TG    +++ SP LE    +G EVL +VD +D++    + +++   L S  +  E L       K DES++ +      KEK +        VL                P CL   +      MER      LR+     Y S+ K +EIN ++PI+ ++
Sbjct:  376 NFGSVLKEGLCESMNTEFREELISVCRFYSTHSNDSLISLEDYIERMKPEQNNIYYLTGNDLDSIKKSPQLEGFVSRGIEVLLLVDPVDDFWTNVVTDYQKVPLRSVIRADEDLEKFSDVEKDDESKESQNEDAQSKEKVDKFISYAAQVLTNLVSNVRVSKKLTDSPVCLAVADGSMDIRMERF-----LREQKQLNYKST-KILEINSKHPIVSKM 587          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP5 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisA53) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.811e-19
Identity = 71/223 (31.84%), Postives = 110/223 (49.33%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGL-CKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSV 661
            +F   +K GI ED   + KL  L R+ +TK GD  T LK+YV  +++ Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      +F GK L S ++  +  D   + DE K ++   E  E L    IKD LG                 CL+ G  G    +ER M AQ  R        +SK  +EIN  +P++  + +  +AD  D S+
Sbjct:  375 AFGPVIKEGIWEDYERREKLLALSRFTTTK-GDNRT-LKNYVEDLRDNQTEIYYLVGDSLERLKSNPKLESAAARGIEVLLLTDPVDAFWTSAPLDFGGKPLKSLSQGDVNFDLIPTTDEAKDEQPKPETDEALVIATIKDALGERVSDVRASQRLTASASCLIAGGQGPDRALER-MLAQQNRGG------ASKPILEINLRHPLVAAIGRPGNADAADLSL 588          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_AZOC5 (Chaperone protein htpG OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 68/225 (30.22%), Postives = 104/225 (46.22%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS----LKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD----ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIM-KAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 649
            +F   LK G++ED   + +L  L R+ +T SG    +    LKDYV  +KE Q  IYYITG+  + VE++P LE  + +G EVL + D +D + V    ++EGK   S T+    L        DE +  E   +        +K+ LG                 CLV  E G    +E+++  A  L D       ++K  +EINP +P++  L     +D N
Sbjct:  377 NFGAVLKEGLYEDYERRAQLLNLARFKTTTSGTAADTGWRTLKDYVADLKENQTAIYYITGDLAR-VEHAPQLEGFRARGVEVLLLPDQVDSFWVTAGVDYEGKPFKSVTQGAADLSLIPLPKSDEAETPEPEAKDTGDFIAFVKETLGDQVADVRASDRLTTSAVCLVAPESGIDRRLEKLLASAGRLGD-------AAKPVLEINPRHPLVAALAAHGASDSN 593          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_CLOTE1.041e-1928.90Chaperone protein htpG OS=Clostridium tetani GN=ht... [more]
HTPG_CHLCH1.359e-1927.48Chaperone protein htpG OS=Chlorobium chlorochromat... [more]
HTPG_HELPJ1.775e-1932.57Chaperone protein htpG OS=Helicobacter pylori J99 ... [more]
HTPG_EHRRG1.775e-1930.73Chaperone protein htpG OS=Ehrlichia ruminantium (s... [more]
HTPG_OCEIH2.319e-1931.05Chaperone protein htpG OS=Oceanobacillus iheyensis... [more]
HTPG_RICFE3.028e-1928.44Chaperone protein htpG OS=Rickettsia felis GN=htpG... [more]
HTPG_RICTY5.166e-1927.49Chaperone protein htpG OS=Rickettsia typhi GN=htpG... [more]
HTPG_EHRRW5.166e-1930.28Chaperone protein htpG OS=Ehrlichia ruminantium (s... [more]
HTPG_RHOP58.811e-1931.84Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_AZOC51.151e-1830.22Chaperone protein htpG OS=Azorhizobium caulinodans... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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