FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_METPB (Chaperone protein htpG OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=htpG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 66/219 (30.14%), Postives = 105/219 (47.95%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKS 658
            +F   LK GI+ED   + ++A LLR+ S+  G   TSL DYV+RMK  Q  IYY+  +  +A++NS  LE  + +G EVL + D +D +   QL +FE K L S T+    L + + E +  E      + L   +K  L                   L     G    M+R+++       +  G+  S   +EINP + ++  L  RA+A ++ K+
Sbjct:  374 NFGSVLKEGIYEDFERRAEIAPLLRFRSSTEGG-WTSLPDYVSRMKPEQEAIYYLVADDVEALKNSAQLEGFRARGVEVLLLSDHVDAFWPEQLGKFEDKPLRSVTQGSADLAKLKPEGEAAED-APALDRLVAALKLALEPDVSDVRVTDRLVDSAVVLAASGMGPDLQMQRLLR------RAGRGFGGSAPILEINPRHALIRSLNDRAEAGEDLKA 584          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_METEP (Chaperone protein htpG OS=Methylobacterium extorquens (strain PA1) GN=htpG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 66/219 (30.14%), Postives = 106/219 (48.40%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKS 658
            +F   LK GI+ED   + ++A LLR+ S+  G   TSL +YV RMK  Q  IYY+  +  +A++NS  LE  + +G EVL + D +D +   QL +FE K L S T+    L + + E +  E      + L   +K  L                   L T   G    M+R+++       +  G+  S   +EINP + ++  L +RA+A ++ K+
Sbjct:  374 NFGPVLKEGIYEDFERRGEIAPLLRFRSSTEGG-WTSLPEYVARMKPEQEAIYYLVADDVEALKNSAQLEGFRARGVEVLLLSDHVDAFWPEQLGKFEDKPLRSVTQGSADLAKLKPEGETAEA-APALDTLVAALKLALEPDVSDVRTTDRLVDSAVVLATSGMGPDLQMQRLLR------RAGRGFGGSAPILEINPRHALIRSLNERAEAGEDLKA 584          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_SULDN (Chaperone protein htpG OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=htpG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 60/212 (28.30%), Postives = 110/212 (51.89%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGE-SKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            F   LK G++ D  N+  + ELL++++  S DE   +++++  + E + +IYYITG+ S   +++SP LE+ K +G  VL + + ID      + E++  KL+      +K +E+E++KK +E   ++FEGL K +K+ LG               P  L   +      M +IMK      ++ A        ++INP++ ++ +L+  AD
Sbjct:  385 FGNVLKEGLYSDYGNRENILELLKFNTINS-DEKIMIEEFIKNVDETKKEIYYITGKTSLSMLKSSPALERFKSRGINVLVLNEEIDTIIFPMVTEYKEYKLIHVND--VKFEENENDKKAQEKSSKEFEGLTKELKESLGDSVKSVEVTFDLVDSPVKLKEDKEDPAFMMAQIMKQMGQSGDTPA----PAPILQINPKHELIIKLKNSAD 589          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RICM5 (Chaperone protein htpG OS=Rickettsia massiliae (strain Mtu5) GN=htpG PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18
Identity = 57/211 (27.01%), Postives = 106/211 (50.24%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT+  + ++++  + + K T  +K +   K++    K+ LG               P CL   +      MER +  Q    N      +S K +E+NP+N I+E++
Sbjct:  371 NFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKEIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEEKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQKQIAN------ASAKNLELNPKNKIIEKI 574          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BRAJA (Chaperone protein htpG OS=Bradyrhizobium japonicum GN=htpG PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18
Identity = 71/227 (31.28%), Postives = 105/227 (46.26%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD-----ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 667
            +F   LK GI+ED   + KL  L R+ +T    E  SLK  V   K  Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      EFEGK L S ++  L LD     ++ DE K  E   ++   +  VIK  LG                 CLV    G +  +ERI+  Q          M +K  +EIN  +P++  + K   A    K+V D
Sbjct:  375 AFGAVLKEGIYEDFERREKLLALSRFTTTTG--EKRSLKQVVADFKPNQTEIYYLVGDSIERLKSNPRLEAATARGIEVLLLSDPVDAFWTSMPTEFEGKPLKSLSQGDLNLDLIPRVDATDEAKKDEPEADEAATIA-VIKAALGERVSDVKASTRLTSSASCLVADSQGPSRELERILSQQNRG-------MRAKPVLEINLRHPMVGAITK---AQAGSKAVDD 588          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_WIGBR (Chaperone protein htpG OS=Wigglesworthia glossinidia brevipalpis GN=htpG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 63/209 (30.14%), Postives = 101/209 (48.33%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            F   LK G  ED  N   + +L R+ ST   S ++  SL+DYV RM+ GQN I+YIT ++  + +N+P LEKLK+K  EVL + D IDE+ +  + EF+  K  S +K    L+   +DE   ++  ++K   +   IK  L                P  + T E   T  M +++ +       +      K   E+N  +PI++ +
Sbjct:  386 FGLILKEGPSEDIKNYENVIKLFRFSSTYINSENQEVSLEDYVKRMQSGQNKIFYITSDNYLSAKNNPHLEKLKEKKIEVLLLFDRIDEWMMNYMTEFKKIKFQSISKYSSYLENIFKDENNDQKNTEQKLSTIILRIKSYLKDRVKDVRFTSKLTNSPSTVTTDENDITTQMSKLLISTGQESPEI------KYIFELNANHPIIKHV 588          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: TRAP1_HUMAN (Heat shock protein 75 kDa, mitochondrial OS=Homo sapiens GN=TRAP1 PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 62/202 (30.69%), Postives = 102/202 (50.50%), Query Frame = 2
Query:   50 KTKLAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSA----TKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTAN---MERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRK 628
            K  +A+LLRY S+     +LTSL +Y +RM+ G  +IYY+   ++   E+SP+ E +KKK  EVL+  +  DE  +  L+EF+ KKL+S       +  K ++ ED     E L EK  E L   +++VLG               P  +   E G   +   M+++ K Q  R   +      + T+EINP + ++++L +
Sbjct:  461 KEDIAKLLRYESSALPSGQLTSLSEYASRMRAGTRNIYYLCAPNRHLAEHSPYYEAMKKKDTEVLFCFEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDRSPAAECLSEKETEELMAWMRNVLGSRVTNVKVTLRLDTHPAMVTVLEMGAARHFLRMQQLAKTQEERAQLL------QPTLEINPRHALIKKLNQ 656          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP2 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain HaA2) GN=htpG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 71/223 (31.84%), Postives = 105/223 (47.09%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGL------KLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 652
            +F   +K G++ED   + KL  L R+  T +  E  SL  YV  MKE Q +IYY+ G+S   ++ +P LE    +G EVL + DA+D +      +F GK L S ++  +      KLD  + E K  E  K     +  VIKD LG                 CLV G +G    +E+++     R N  A   ++K  +EIN  +P++  L     ADK D
Sbjct:  375 AFGPVIKEGLYEDYERREKLLSLARF--TTTAGEKRSLAQYVEAMKENQTEIYYLVGDSLDRLKANPKLESAAARGIEVLLLTDAVDAFWTSGGLDFGGKPLKSLSQGEVNFDLIPKLDADKAEDKPDEA-KADEATVIAVIKDALGDRVSDVKASQRLTASASCLVAGGFGPDRELEKML----ARANKGA---ATKPVLEINLGHPLVAALAD-TKADKAD 586          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_METC4 (Chaperone protein htpG OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=htpG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 65/219 (29.68%), Postives = 105/219 (47.95%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKS 658
            +F   LK GI+ED   + ++A LLR+ S+  G   TSL +YV RMK  Q  IYY+  +  +A++NS  LE  + +  EVL + D +D +   QL +FE K L S T+    L + + E +  E      + L   +K  L                   L T   G    M+R+++       +  G+  S   +EINP + ++  L +RA+A ++ K+
Sbjct:  374 NFGPVLKEGIYEDFERRAEIAPLLRFRSSTEGG-WTSLPEYVARMKPEQEAIYYLVADDVEALKNSAQLEGFRARRVEVLLLSDHVDAFWPEQLGKFEDKPLRSVTQGSADLAKLKPEGETAEA-APALDTLVAALKLALEPDVSDVRTTDRLVDSAVVLATSGMGPDLQMQRLLR------RAGRGFGGSAPILEINPRHALIRSLNERAEAGEDLKA 584          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_HELHP (Chaperone protein htpG OS=Helicobacter hepaticus GN=htpG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 57/141 (40.43%), Postives = 79/141 (56.03%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSA-TKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLG 424
            F K LK G++ D  NK K+ ELLR+ S KS  E  SLK Y   M   Q  IYY+ GE+K A++N+P LEK  +KG++VL + D ID   +  + E++   L S  +KE L       E+ + E  +  +E L K  KD LG
Sbjct:  381 FGKVLKEGLYGDYENKEKILELLRFDSFKS--EYISLKAYKESMGNEQKSIYYMLGENKDALKNAPLLEKFAQKGFDVLLLSDEIDAIVMPMVGEYDKVPLKSINSKEAL---AELGEESIDEATQNAYEPLIKGFKDALG 516          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_METPB4.373e-1830.14Chaperone protein htpG OS=Methylobacterium populi ... [more]
HTPG_METEP4.373e-1830.14Chaperone protein htpG OS=Methylobacterium extorqu... [more]
HTPG_SULDN5.711e-1828.30Chaperone protein htpG OS=Sulfurimonas denitrifica... [more]
HTPG_RICM57.459e-1827.01Chaperone protein htpG OS=Rickettsia massiliae (st... [more]
HTPG_BRAJA7.459e-1831.28Chaperone protein htpG OS=Bradyrhizobium japonicum... [more]
HTPG_WIGBR9.742e-1830.14Chaperone protein htpG OS=Wigglesworthia glossinid... [more]
TRAP1_HUMAN2.170e-1730.69Heat shock protein 75 kDa, mitochondrial OS=Homo s... [more]
HTPG_RHOP22.170e-1731.84Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_METC42.170e-1729.68Chaperone protein htpG OS=Methylobacterium chlorom... [more]
HTPG_HELHP2.170e-1740.43Chaperone protein htpG OS=Helicobacter hepaticus G... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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