FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ALCBS (Chaperone protein htpG OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=htpG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 64/218 (29.36%), Postives = 107/218 (49.08%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL-TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL-DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA--QALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            F   +K G+ ED  N+  +A LLR+ ++K+ D + TSL  Y+      Q+ IYY+  ++  A   SP LE  +KKG EVL + D +DE+ VG L+ ++  KLV+A +  L L DESE        ++     L + ++ V                 P CLV  E      M R+++A  Q + +N        K  +E+N ++ +++ L +  + +K
Sbjct:  376 FGSVIKEGVAEDRDNQQSIAALLRFATSKTPDSVSTSLDQYLESKPADQDCIYYLLADTPSAARQSPHLEVFRKKGIEVLLLSDPVDEWMVGYLESYKEVKLVNAARGELDLGDESEQANNDDPLIQRLAASLTEQVEAV--------RATTRLVDSPACLVLAEDQLGPQMRRMLEAAGQPVPEN--------KPVLEVNLDHTLLQALTRIEEDEK 577          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_NITWN (Chaperone protein htpG OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17
Identity = 65/221 (29.41%), Postives = 98/221 (44.34%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCK---VIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            +F    K GI++ +  +  +  L R+ +T     L SLKDYV  +KE Q  IYY+ G+    +E SP LE  + +G EVL + D +D + V     FEGK   S T+    L          E   +  EG+ +    +K  L                P CLV  E G    +E+I+    L    +AG  +SK  +E+NP +P++  L      D+  K
Sbjct:  379 AFGPMFKEGIYDAADRRDTVLGLSRFRTTAGS--LRSLKDYVGALKENQTSIYYLAGQDAARLEASPHLEGFRARGVEVLLLSDPVDSFWVTSGPSFEGKPFKSVTQGAADLAAIPRLDAGTEPSPDVSEGVTEFLAFLKTTLSDLVSDVRSSDRLTDSPVCLVAAESGPDRQLEKIL----LGVGQLAG--ASKPVLEVNPNHPLVASLAALGQDDREFK 591          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_BUCBP (Chaperone protein htpG OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=htpG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17
Identity = 61/224 (27.23%), Postives = 105/224 (46.88%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 667
            F   LK G  EDS N+T ++ L+R+ S  +  +    SL++YV  MK+ Q  IY+IT ++  +  +SP LE  KKK  +VL + D IDE+ +  L E+  KK  S +K+   +++   ++    ET +E         K  L                P  ++T     +  M ++  A      ++      K  +EINP + ++    K+ + +KN+K  K+
Sbjct:  379 FGLILKEGPAEDSENRTSISNLIRFSSLLNNTQKPTMSLENYVKNMKQNQEKIYFITADNYASAVSSPHLEFFKKKNIDVLILSDKIDEWMMNYLIEYNEKKFQSVSKDDKSIEKLVHEQNSQNETYQENMNDFLNRAKKTLSDKIKDIRFTHKLTNTPAMVITDSNEMSTQMAKLFSAAGQTVPTI------KYILEINPNHLLI----KKINNEKNEKKFKN 592          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJE (Chaperone protein htpG OS=Campylobacter jejuni GN=htpG PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.835e-17
Identity = 63/208 (30.29%), Postives = 99/208 (47.60%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP LE+ K+K  EVL M D ID      L EFEG K VS       +++ ED+ ++ +  K  F  L    K++L                P C+V  +      M++++K      N        K  +EINP++ I   L+
Sbjct:  373 TFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPML-EFEGLKFVS-------INQVEDKNELSDEEKNTFAPLVAKFKELLKDQVEDVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQN-------FKPILEINPKHAIFTGLK 564          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJD (Chaperone protein htpG OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17
Identity = 62/208 (29.81%), Postives = 99/208 (47.60%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP LE+ K+K  EVL M D ID      L EFEG K V+       +++ ED+ ++ +  K  F  L    K++L                P C+V  +      M++++K      N        K  +EINP++ I   L+
Sbjct:  373 TFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPML-EFEGLKFVA-------INQVEDKNELSDEEKNTFAPLVAKFKELLKDQVEDVRLTSRLKDSPSCIVYDKNKLDFAMQQLLKQMGQEQN-------FKPILEINPKHAIFTGLK 564          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_SULNB (Chaperone protein htpG OS=Sulfurovum sp. (strain NBC37-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.247e-17
Identity = 67/215 (31.16%), Postives = 105/215 (48.84%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYM----VDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            +++ +K GI+ D TNK  L  ++RY S+ S + + SL DY++R    + +IYYI G  +K + NSP LE  KK   EVL M    VD+I    +G  KE+  K + +      K +E       KE + ++F+ L   IK+VLG               P C++       A M   M AQ  ++      +     +EINPE+ ++++L K  D
Sbjct:  378 YNRVIKEGIYTDHTNKETLLGIVRYKSS-SEEGMVSLDDYISRGDSEKKEIYYIVGADEKVLRNSPLLEAYKKANIEVLIMDDEEVDSIVAPMIGSYKEWTFKDITTIDAPDSKTEEE------KEEISKEFKPLTDKIKEVLGDEVKEVKISTRLTESPSCVLKDASDPMAGM-AAMFAQMGQEMPEIPLI-----LEINPEHEMIKKLDKVED 579          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: TRAP1_BOVIN (Heat shock protein 75 kDa, mitochondrial OS=Bos taurus GN=TRAP1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.077e-16
Identity = 61/207 (29.47%), Postives = 103/207 (49.76%), Query Frame = 2
Query:   50 KTKLAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSA----TKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTAN---MERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 643
            K  +A+LLRY S+     +LTSL DY +RM+ G  +IYY+   ++   E+SP+ E +K+K  EVL+  +  DE  +  L+EF+ KKL+S       +  K ++ ED     + L EK  E L   +++ LG               P  +   E G   +   M ++ K Q  R   +      + T+EINP + ++++L +  D++
Sbjct:  460 KEDIAKLLRYESSALPAGQLTSLSDYASRMQAGTRNIYYLCAPNRHLAEHSPYYEAMKRKNTEVLFCYEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDGAPAGDCLSEKETEDLMAWMRNALGSRITDVKVTLRLDTHPAMITVLEMGAARHFLRMRQLAKTQEERAQLL------QPTLEINPRHVLIKKLSQLRDSE 660          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJJ (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.077e-16
Identity = 62/208 (29.81%), Postives = 99/208 (47.60%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP LE+ K+K  EVL M D ID      L EFEG K V+       +++ ED+ ++ +  K  F  L    K++L                P C+V  +      M++++K      N        K  +EINP++ I   L+
Sbjct:  373 TFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPML-EFEGLKFVA-------INQVEDKNELSDEEKNTFAPLVAKFKELLKDQVEDVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQN-------FKPILEINPKHAIFTGLK 564          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJ8 (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.077e-16
Identity = 62/208 (29.81%), Postives = 99/208 (47.60%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP LE+ K+K  EVL M D ID      L EFEG K V+       +++ ED+ ++ +  K  F  L    K++L                P C+V  +      M++++K      N        K  +EINP++ I   L+
Sbjct:  373 TFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPML-EFEGLKFVA-------INQVEDKNELSDEEKNTFAPLVAKFKELLKDQVEDVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQN-------FKPILEINPKHAIFTGLK 564          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJR (Chaperone protein htpG OS=Campylobacter jejuni (strain RM1221) GN=htpG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.407e-16
Identity = 61/208 (29.33%), Postives = 99/208 (47.60%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 625
            +F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP LE+ K+K  EVL M D ID      L EFEG K ++       +++ ED+ ++ +  K  F  L    K++L                P C+V  +      M++++K      N        K  +EINP++ I   L+
Sbjct:  373 TFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPML-EFEGLKFIA-------INQVEDKNELSDEEKNTFAPLVAKFKELLKDQVEDVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQN-------FKPILEINPKHAIFTGLK 564          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_ALCBS2.170e-1729.36Chaperone protein htpG OS=Alcanivorax borkumensis ... [more]
HTPG_NITWN2.834e-1729.41Chaperone protein htpG OS=Nitrobacter winogradskyi... [more]
HTPG_BUCBP2.834e-1727.23Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_CAMJE4.835e-1730.29Chaperone protein htpG OS=Campylobacter jejuni GN=... [more]
HTPG_CAMJD6.314e-1729.81Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_SULNB8.247e-1731.16Chaperone protein htpG OS=Sulfurovum sp. (strain N... [more]
TRAP1_BOVIN1.077e-1629.47Heat shock protein 75 kDa, mitochondrial OS=Bos ta... [more]
HTPG_CAMJJ1.077e-1629.81Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJ81.077e-1629.81Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJR1.407e-1629.33Chaperone protein htpG OS=Campylobacter jejuni (st... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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