FC931307

Overview
NameFC931307
Unique NameFC931307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: TRAP1_RAT (Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus GN=Trap1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.837e-16
Identity = 61/202 (30.20%), Postives = 101/202 (50.00%), Query Frame = 2
Query:   50 KTKLAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSA----TKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTAN---MERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRK 628
            K  +A+LLRY S+     +LTSL DY +RM+ G  +IYY+   ++   E+SP+ E +K+K  EVL+  +  DE  +  L+EF+ KKL+S       +  K ++ ED     E L EK  E L   +++ LG               P  +   E G   +   M+++ K Q  R   +      + T+EINP + ++++L +
Sbjct:  463 KEDIAKLLRYESSALPAGQLTSLSDYASRMQAGTRNIYYLCAPNRHLAEHSPYYEAMKQKQTEVLFCYEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDTSPAGERLSEKETEELMAWMRNALGSRVTNVKVTFRLDTHPAMVTVLEMGAARHFLRMQQLAKTQEERAQLL------QPTLEINPRHTLIKKLNQ 658          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: TRAP1_MOUSE (Heat shock protein 75 kDa, mitochondrial OS=Mus musculus GN=Trap1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.837e-16
Identity = 61/200 (30.50%), Postives = 100/200 (50.00%), Query Frame = 2
Query:   50 KTKLAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSA----TKEGLKLDESEDEKKMKETLKEK-FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTAN---MERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            K  +A+LLRY S+     +LTSL DY +RM+ G  +IYY+   ++   E+SP+ E +K+K  EVL+  +  DE  +  L+EF+ KKL+S       +  K ++ ED     E L EK  E L   +++ LG               P  +   E G   +   M+++ K Q  R   +      + T+EINP + ++++L
Sbjct:  463 KEDIAKLLRYESSALPAGQLTSLPDYASRMQAGTRNIYYLCAPNRHLAEHSPYYEAMKQKHTEVLFCYEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDTSPADERLSEKETEDLMAWMRNALGSRVTNVKVTFRLDTHPAMVTVLEMGAARHFLRMQQLAKTQEERAQLL------QPTLEINPRHTLIKKL 656          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RHIEC (Chaperone protein htpG OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=htpG PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.837e-16
Identity = 61/209 (29.19%), Postives = 98/209 (46.89%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESE--DEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   LK GI+ED   + +L  L R+H++ S +   SL +YV   KEGQ+ IYY+ G S   ++ SP LE  + +G EVL + D++D + V    EFEGK   S T+    L +    D +   E             ++ L                  CLV  E G+   ME+I++      N+     ++K  +EIN  +P+++ +
Sbjct:  377 NFGPVLKEGIYEDYERRAQLMALARFHTSASPEGHRSLAEYVKDAKEGQDAIYYLAGGSLDQLKASPQLEGFRARGIEVLLLTDSVDSFWVVNAPEFEGKAFKSITQGTADLAQFPRLDNQTPPEQDSAGLATFIGFAREKLAGQVADVRASDRLTESAVCLVAPEDGYDRQMEKILQ------NAGRLQGATKPILEINLAHPVIKAI 579          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ANAMM (Chaperone protein htpG OS=Anaplasma marginale (strain St. Maries) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 62/224 (27.68%), Postives = 106/224 (47.32%), Query Frame = 2
Query:    2 SFSKNLKLGIHE--DSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATK----------EGLKLDESEDEKKMKET----LKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 622
            +F   LK G+ E  D+ ++  +  + R++S+ S + EL SL DY++RMK GQ  I+Y++G   ++   SP +E +   G EV+ +VD +D++    + E++G    S T+          EG     ++ +K+ K+T     KE  E     +K VLG                 CL   E+     MER      LR+     Y  S + +E+N ++P++  L
Sbjct:  369 NFGPVLKEGLCEAMDTESRESILSVCRFYSSNSKEGELISLGDYISRMKPGQEHIFYLSGNDLESAMRSPQIEGMVSNGIEVVLLVDPVDDFWTSVVLEYKGVPFKSVTRVDESDLEKFTEGDDQQSTKKKKEKKDTDDAQQKENVEAFIDYMKKVLGDSVSDIKVSRKLTTSLVCLAVPEHALDIRMERF-----LREQKQLSYKGS-RILELNIKHPVLSGL 586          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_TREPA (Chaperone protein htpG OS=Treponema pallidum GN=htpG PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 61/218 (27.98%), Postives = 105/218 (48.17%), Query Frame = 2
Query:    5 FSKNLKLGIHEDSTNKTKLAELLRYHSTKSG---DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEY---AVGQLKEFEGKKLVS-ATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 637
            +++ LK G++ D  ++ +L EL+R+ +       D  TS  +YV+RMK  Q  IYYI G   + +  SP  E  + +G+EVL M D ID     +V + KE+E + +    ++E L+ +E  D    +E   + F+ L + +  +L                  C+V  E   T  MER+M+A      S       K  +EIN  + ++++L++  D
Sbjct:  390 YNRPLKEGLYSDYEHREQLLELVRFRTLSESVPEDGWTSFAEYVSRMKPDQKAIYYIAGNDDRVLRQSPHAESYRLQGFEVLVMSDDIDGIVMPSVSKYKEWELRAINRLGSEEELRPNEETDAAAQRE---QGFKPLLERLTHILSDSVKEVRLSKRLSDSVSCIVIDENDPTVQMERLMRATGQTHKS-----KIKPILEINASHTLVQKLKESTD 599          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_RHIME (Chaperone protein htpG OS=Rhizobium meliloti GN=htpG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16
Identity = 57/218 (26.15%), Postives = 97/218 (44.50%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL---DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 646
            +F   +K GI+ED   + +L  L R+ +T   D+  +L DYV  MKEGQ+ IYY+TG++   ++ SP LE  + +G EVL +   +D + V    +F+GK   S T+    L    +++D                   ++ LG                 CLV  E G    ++++++     +       + K  +EINP + ++  L      DK
Sbjct:  376 NFGSVIKEGIYEDFERRGQLLALSRFRTTADDDKPRALSDYVKEMKEGQSAIYYLTGDNLAQLKASPQLEGFRARGIEVLLLTCPVDSFWVTTAPDFDGKPFKSITQGAADLAGIAKNDDAAAASPEAGAAVTDFVSFARETLGEAVSDVRTSDRLTESAVCLVAPEQGPDRQLQKMLQDAGRIEG------APKPVLEINPGHQLIAALATCPSEDK 587          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ANAPZ (Chaperone protein htpG OS=Anaplasma phagocytophilum (strain HZ) GN=htpG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16
Identity = 59/228 (25.88%), Postives = 105/228 (46.05%), Query Frame = 2
Query:    2 SFSKNLKLGIHE--DSTNKTKLAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLK------------LDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADA 640
            +F   LK G+ E  D+ ++  +  + ++H++  +  EL SL DY++RMK GQ  I+Y++G+  ++ + SP +EKL   G EV+ +VD +D++    + E++G    S  + G K             D++ ++     + KE      + +K VL                  CL   +      MER      LR+     Y    + +EIN ++PI + L K  +A
Sbjct:  369 NFGPVLKEGLCEAMDTESREGVLSVCKFHTSACAAGELVSLADYISRMKPGQESIFYLSGDDLESTKRSPQIEKLVSSGIEVILLVDPVDDFWTSVVSEYKGVPFKSVMRVGEKDLEKCIGASDDSGDKTSEDSGESASDKESIGSFIEYLKKVLDGVVSDVRVSKKLTTSLVCLAVPDNSMDIRMERF-----LREQKQLNY-KGNRILEINIDHPIAKSLLKEHEA 590          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_FUSNN (Chaperone protein htpG OS=Fusobacterium nucleatum subsp. nucleatum GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15
Identity = 61/224 (27.23%), Postives = 113/224 (50.45%), Query Frame = 2
Query:    5 FSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL----DESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSV 661
            F +++K G+ +    NK KL +LL + S+   D+ T+LK+YV RM + + +I Y+  ES  A +  P +EKLK++G EVL + D IDE+ +  ++++ GK+  S      K     ++ E+ KK+ +  KE  E   + +KD +                    +  + G +  ME+ + ++   +N M     ++K + INPE+ +   L+   + +  +K V
Sbjct:  365 FGRSIKAGVQDMFGMNKEKLQDLLIFVSSHD-DKYTTLKEYVDRMGDNK-EILYVPAESVDAAKYLPKMEKLKEQGREVLILTDKIDEFTLMAMRDYSGKEFKSINSSDFKFSDDKEKEEEVKKIADENKELIEKAKEFLKDKVS-----EVELSNNIGNSASSLLAKGGLSLEMEKTL-SEMTNNNDMP---KAEKVLAINPEHVLFNRLKSSVNTEDFNKLV 577          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_ORITB (Chaperone protein htpG OS=Orientia tsutsugamushi (strain Boryong) GN=htpG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15
Identity = 58/228 (25.44%), Postives = 104/228 (45.61%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE-KKMKETLK-----------EKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 649
            +F   LK G+ E + +  KL ++  + S    D+  SL +Y+  +K  Q +IYYITG+  +A+++SP +E L  +  +VL + D +D++ V   +++    L S T   +++D  + +  K  +T             +  E L K  K+VLG               P CL   E       ER +  Q    +       S K +EINP + I++++ +    ++N
Sbjct:  368 NFGAVLKEGLCEGTADVDKLLKICLFRSALQ-DKFISLDEYIANLKSEQKNIYYITGDDLEALKSSPQIEGLLSRNIDVLLLTDDVDKFWVMVTRKYNDYVLKSVTSANIEIDNCDTKTAKSSDTNNDGKDDTSSSDDQNCEQLIKYFKEVLGDKVKSVEVSKKLTRSPVCLTVPEGSMDIRTERFLIEQKQLSS------HSSKILEINPNHTIIKKINENIKLNQN 588          
BLAST of FC931307 vs. ExPASy Swiss-Prot
Match: HTPG_METS4 (Chaperone protein htpG OS=Methylobacterium sp. (strain 4-46) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.831e-14
Identity = 58/216 (26.85%), Postives = 102/216 (47.22%), Query Frame = 2
Query:    2 SFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 649
            +F   LK GI ED+ ++  +A LLR+ ST + +  TS  DYV+RMK  Q  IY + G+   A+  S  +E  + +G EVL + D +D +   +L +F+GK + S T+    L     E +      +  E L K +K++L                   L     G    M+R+++       +  G+ +    +E+NP + ++  + +RA A ++
Sbjct:  366 AFGPVLKEGIWEDAEHRDDIAALLRFRST-AVEGWTSFADYVSRMKPNQEAIYILVGDDAAALARSAQIEGFRARGIEVLLLSDHVDAFWPERLDKFDGKPIRSITQSADDLSAFAPEGEAAGEAADLTELLPK-LKEILKDDVAEVRASQRLVESAVLLSASSGGPDLQMQRLLR------RAGRGFGAGLPVLELNPRHALVRRIAERARAGED 573          
The following BLAST results are available for this feature:
BLAST of FC931307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
TRAP1_RAT1.837e-1630.20Heat shock protein 75 kDa, mitochondrial OS=Rattus... [more]
TRAP1_MOUSE1.837e-1630.50Heat shock protein 75 kDa, mitochondrial OS=Mus mu... [more]
HTPG_RHIEC1.837e-1629.19Chaperone protein htpG OS=Rhizobium etli (strain C... [more]
HTPG_ANAMM2.399e-1627.68Chaperone protein htpG OS=Anaplasma marginale (str... [more]
HTPG_TREPA5.346e-1627.98Chaperone protein htpG OS=Treponema pallidum GN=ht... [more]
HTPG_RHIME6.981e-1626.15Chaperone protein htpG OS=Rhizobium meliloti GN=ht... [more]
HTPG_ANAPZ6.981e-1625.88Chaperone protein htpG OS=Anaplasma phagocytophilu... [more]
HTPG_FUSNN1.191e-1527.23Chaperone protein htpG OS=Fusobacterium nucleatum ... [more]
HTPG_ORITB5.910e-1525.44Chaperone protein htpG OS=Orientia tsutsugamushi (... [more]
HTPG_METS43.831e-1426.85Chaperone protein htpG OS=Methylobacterium sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionC34103G02EF PostHarvP1 Citrus clementina cDNA clone C34103G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931307 ID=FC931307; Name=FC931307; organism=Citrus clementina; type=EST; length=721bp
GTCATTCTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTC
ACTTCTGGTTNCAGCCTTGAT
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