FC931309
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHP_HUMAN (Isocitrate dehydrogenase [NADP], mitochondrial OS=Homo sapiens GN=IDH2 PE=1 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 1.186e-60 Identity = 105/143 (73.43%), Postives = 126/143 (88.11%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTV 707 R+KV P+VEMDGDEMTRIIWQ IK+KLI P++D+ +KY+DLG+ NRD TDD+VT++SA AT KY+VA+KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFREPI+C+NIPR+VPGW KPI IGRHA GDQY+ATD V Sbjct: 43 RIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDIQLKYFDLGLPNRDQTDDQVTIDSALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFV 185
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHP_PIG (Isocitrate dehydrogenase [NADP], mitochondrial (Fragment) OS=Sus scrofa GN=IDH2 PE=1 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.643e-60 Identity = 104/144 (72.22%), Postives = 127/144 (88.19%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 R+KV P+VEMDGDEMTRIIWQ IK+KLI P++D+ +KY+DLG+ NRD T+D+VT++SA AT KY+VA+KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFREPI+C+NIPR+VPGW KPI IGRHA GDQY+ATD V+ Sbjct: 12 RIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVV 155
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHP_BOVIN (Isocitrate dehydrogenase [NADP], mitochondrial OS=Bos taurus GN=IDH2 PE=1 SV=2) HSP 1 Score: 231.876 bits (590), Expect = 2.643e-60 Identity = 104/144 (72.22%), Postives = 127/144 (88.19%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 R+KV P+VEMDGDEMTRIIWQ IK+KLI P++D+ +KY+DLG+ NRD T+D+VT++SA AT KY+VA+KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFREPI+C+NIPR+VPGW KPI IGRHA GDQY+ATD V+ Sbjct: 43 RIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVV 186
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHH_YEAST (Isocitrate dehydrogenase [NADP] OS=Saccharomyces cerevisiae GN=IDP3 PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.004e-59 Identity = 106/147 (72.11%), Postives = 125/147 (85.03%), Query Frame = 3 Query: 273 IDRVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVIK 713 + ++KV +PIVEMDGDE TR+IW++IK+KLI PYLD+D+KYYDL I RD T+D+VT +S+ ATLKY VA+KCATITPDE RMKEF LK MW+SPNGTIRNIL GTVFREPI+ IPR+VP W+KPI IGRHAFGDQYRATD IK Sbjct: 1 MSKIKVVHPIVEMDGDEQTRVIWKLIKEKLILPYLDVDLKYYDLSIQERDRTNDQVTKDSSYATLKYGVAVKCATITPDEARMKEFNLKEMWKSPNGTIRNILGGTVFREPIIIPKIPRLVPHWEKPIIIGRHAFGDQYRATDIKIK 147
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_YEAST (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Saccharomyces cerevisiae GN=IDP2 PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.713e-59 Identity = 103/144 (71.53%), Postives = 124/144 (86.11%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 ++KV NPIVEMDGDE TRIIW +I+DKL+ PYLD+D+KYYDL + RD T+D+VTV+SA ATLKY VA+KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFREPI+ IPR+VP W+KPI IGRHAFGDQY+ATD ++ Sbjct: 3 KIKVANPIVEMDGDEQTRIIWHLIRDKLVLPYLDVDLKYYDLSVEYRDQTNDQVTVDSATATLKYGVAVKCATITPDEARVEEFHLKKMWKSPNGTIRNILGGTVFREPIIIPRIPRLVPQWEKPIIIGRHAFGDQYKATDVIV 146
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHP_SCHPO (Probable isocitrate dehydrogenase [NADP], mitochondrial OS=Schizosaccharomyces pombe GN=idp1 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 8.502e-59 Identity = 99/150 (66.00%), Postives = 128/150 (85.33%), Query Frame = 3 Query: 258 ASATGIDRVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTV 707 AS+ ++ V+NP+VEMDGDEMTR+IW++I++KL+ PY+D+ + YYDLGI RD T+D++TV++A+A LK +V IKCATITPDE R+KE+ LK MW+SPNGTIRNILNGTVFREPIL +NIP+ +PGW PICIGRHAFGDQY++TD V Sbjct: 6 ASSKSFQKITVKNPVVEMDGDEMTRVIWKIIREKLVLPYMDIKLDYYDLGIEARDKTNDQITVDAAKAILKNDVGIKCATITPDEARVKEYNLKKMWKSPNGTIRNILNGTVFREPILIKNIPKYIPGWTNPICIGRHAFGDQYKSTDLV 155
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHP_DICDI (Isocitrate dehydrogenase [NADP], mitochondrial OS=Dictyostelium discoideum GN=idhM PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.603e-57 Identity = 98/144 (68.06%), Postives = 123/144 (85.42%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 R+KV P+VEMDGDE TRI+W+ IK KLIFPY+D+ +YYDLG+ NRDAT+D+VT+++A A + + +KCATITPDE R+KEFGLK MW+SPNGTIRNIL+GTVFR PI+C+N+P +VPGWKKPI IGRHA GDQY+ATD V+ Sbjct: 26 RIKVTGPVVEMDGDEQTRIMWESIKSKLIFPYVDITPEYYDLGLPNRDATNDQVTIDAANAIKRAKIGVKCATITPDEARVKEFGLKEMWKSPNGTIRNILDGTVFRGPIICKNLPLLVPGWKKPIIIGRHAHGDQYKATDFVV 169
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHP_YEAST (Isocitrate dehydrogenase [NADP], mitochondrial OS=Saccharomyces cerevisiae GN=IDP1 PE=1 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.094e-57 Identity = 104/159 (65.41%), Postives = 127/159 (79.87%), Query Frame = 3 Query: 240 MSFRCFASA--TGIDRVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 +S R F+++ ++KV+ P+VE+DGDEMTRIIW IK KLI PYLD+D+KYYDL + +RDAT DK+T ++AEA KY V IKCATITPDE R+KEF L MW+SPNGTIRNIL GTVFREPI+ IPR+VP W+KPI IGRHA GDQY+ATDT+I Sbjct: 4 LSRRLFSTSRLAAFSKIKVKQPVVELDGDEMTRIIWDKIKKKLILPYLDVDLKYYDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITPDEARVKEFNLHKMWKSPNGTIRNILGGTVFREPIVIPRIPRLVPRWEKPIIIGRHAHGDQYKATDTLI 162
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDH_MYCTU (Isocitrate dehydrogenase [NADP] OS=Mycobacterium tuberculosis GN=icd PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.357e-56 Identity = 97/141 (68.79%), Postives = 120/141 (85.11%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATD 701 ++KV P+VE+DGDEMTR+IW++IKD LI PYLD+ + YYDLGI +RDATDD+VT+++A A K+ V +KCATITPDE R++EF LK MW SPNGTIRNIL GT+FREPI+ N+PR+VPGW KPI IGRHAFGDQYRAT+ Sbjct: 6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATN 146
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDH_MYCBO (Isocitrate dehydrogenase [NADP] OS=Mycobacterium bovis GN=icd PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.357e-56 Identity = 97/141 (68.79%), Postives = 120/141 (85.11%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATD 701 ++KV P+VE+DGDEMTR+IW++IKD LI PYLD+ + YYDLGI +RDATDD+VT+++A A K+ V +KCATITPDE R++EF LK MW SPNGTIRNIL GT+FREPI+ N+PR+VPGW KPI IGRHAFGDQYRAT+ Sbjct: 6 KIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTIFREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATN 146 The following BLAST results are available for this feature:
BLAST of FC931309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931309 ID=FC931309; Name=FC931309; organism=Citrus clementina; type=EST; length=715bpback to top |