FC931309
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHP_MEDSA (Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.351e-72 Identity = 129/170 (75.88%), Postives = 147/170 (86.47%), Query Frame = 3 Query: 225 QLAPAMSFRCF-------ASATGIDRVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVIK 713 Q +P +SF F + G ++KV NPIVEMDGDEMTRIIW+ IKDKLIFP+++LDIKY+DLG+ RD T+DKVTVESAEATLKYNVAIKCATITPDE R+KEFGLKSMWRSPNGTIRNILNGTVFREPI+C+NIPR++PGW KPICIGRHAFGDQYRATD+VIK Sbjct: 1 QFSPNLSFSAFFPIITFTTATMGFQKIKVANPIVEMDGDEMTRIIWKYIKDKLIFPFVELDIKYFDLGLPYRDETNDKVTVESAEATLKYNVAIKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPIICKNIPRLIPGWTKPICIGRHAFGDQYRATDSVIK 170
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_TOBAC (Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 2.548e-71 Identity = 124/146 (84.93%), Postives = 139/146 (95.21%), Query Frame = 3 Query: 276 DRVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVIK 713 D++KV+NPIVEMDGDEMTR+IW+ IKDKLI P+L+LDIKY+DLG+ +RDATDDKVTVESAEAT KYNVAIKCATITPDE R+KEF LKSMWRSPNGTIRNILNGTVFREPI+C+NIPR+VPGW KPICIGRHAFGDQYRATDTVI+ Sbjct: 4 DKIKVENPIVEMDGDEMTRVIWKSIKDKLICPFLELDIKYFDLGLPHRDATDDKVTVESAEATQKYNVAIKCATITPDEARVKEFNLKSMWRSPNGTIRNILNGTVFREPIMCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIQ 149
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_SOYBN (Isocitrate dehydrogenase [NADP] OS=Glycine max GN=IDH1 PE=2 SV=2) HSP 1 Score: 266.544 bits (680), Expect = 9.683e-71 Identity = 124/145 (85.52%), Postives = 136/145 (93.79%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVIK 713 ++KV NPIVEMDGDEMTR+IW+ IKDKLI P+L+LDIKYYDLG+ RD TDDKVT+ESAEATLKYNVAIKCATITPDE R+KEFGLKSMW+SPNGTIRNILNGTVFREPILC+NIPR+VPGW K ICIGRHAFGDQYRATDTVIK Sbjct: 6 KIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYYDLGLPYRDETDDKVTIESAEATLKYNVAIKCATITPDEARVKEFGLKSMWKSPNGTIRNILNGTVFREPILCKNIPRLVPGWTKAICIGRHAFGDQYRATDTVIK 150
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_SOLTU (Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum GN=ICDH-1 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.817e-70 Identity = 123/145 (84.83%), Postives = 136/145 (93.79%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVIK 713 ++ VQNPIVEMDGDEMTR+IW+ IKDKLI P+L+LDIKY+ LG+ +RDATDDKVTVESAEAT KYNVAIKCATITPDE R+KEF LKSMWRSPNGTIRNILNGTVFREPI+C+NIPR+VPGW KPICIGRHAFGDQYRATDTVIK Sbjct: 5 KITVQNPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFSLGLPHRDATDDKVTVESAEATQKYNVAIKCATITPDEARVKEFNLKSMWRSPNGTIRNILNGTVFREPIMCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIK 149
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDH2_CANTR (Isocitrate dehydrogenase [NADP] peroxisomal OS=Candida tropicalis GN=IDP2 PE=1 SV=3) HSP 1 Score: 235.728 bits (600), Expect = 1.830e-61 Identity = 108/146 (73.97%), Postives = 125/146 (85.62%), Query Frame = 3 Query: 273 IDRVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 I ++ V+NPIVEMDGDEMTRIIWQ IKDKLI PYL++D+KYYDLGI RD TDDKVT ++AEA L+Y V +KCATITPDE R+KEF LK MW SPNGT+RN++ GTVFREPI+ NIPRIVP W+KPI IGRHAFGDQY+ATD VI Sbjct: 4 IQKITVKNPIVEMDGDEMTRIIWQFIKDKLILPYLNVDLKYYDLGIEYRDKTDDKVTTDAAEAILQYGVGVKCATITPDEARVKEFNLKKMWLSPNGTLRNVIGGTVFREPIVIDNIPRIVPSWEKPIIIGRHAFGDQYKATDVVI 149
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHP_ASPNG (Isocitrate dehydrogenase [NADP], mitochondrial OS=Aspergillus niger GN=icdA PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.390e-61 Identity = 110/149 (73.83%), Postives = 127/149 (85.23%), Query Frame = 3 Query: 264 ATGIDRVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 AT I ++KV+NP+VE+DGDEMTRIIWQ I++KLI PYLD+D+KYYDLG+ RD TDD+VTVE+AEA KY V +KCATITPDE R++EF LK MW SPNGTIRNIL GTVFREPI+ IPR+VPGW KPI IGRHAFGDQYRATD VI Sbjct: 87 ATEIPKIKVKNPVVELDGDEMTRIIWQEIREKLILPYLDVDLKYYDLGLEYRDQTDDQVTVEAAEAIKKYGVGVKCATITPDEARVEEFKLKKMWLSPNGTIRNILGGTVFREPIIIPAIPRLVPGWNKPIIIGRHAFGDQYRATDRVI 235
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDH1_CANTR (Isocitrate dehydrogenase [NADP], mitochondrial OS=Candida tropicalis GN=IDP1 PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.325e-61 Identity = 108/150 (72.00%), Postives = 129/150 (86.00%), Query Frame = 3 Query: 261 SATGIDRVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 SAT D++KV+NPIVE+DGDEMTRIIWQ IKD+LI PYLD+D+KYYDLGI +RDATDD++T+++A A +Y V +KCATITPDE R+KEF LK MW SPNGTIRNIL GTVFRE I+ IPR++PGW+KPI IGRHAFGDQY+ATD VI Sbjct: 23 SATLADKIKVKNPIVELDGDEMTRIIWQKIKDQLILPYLDVDLKYYDLGIESRDATDDQITIDAANAIKEYGVGVKCATITPDEARVKEFHLKKMWLSPNGTIRNILGGTVFRESIIIPCIPRLIPGWEKPIVIGRHAFGDQYKATDLVI 172
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHP_RAT (Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus GN=Idh2 PE=1 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 1.186e-60 Identity = 104/144 (72.22%), Postives = 128/144 (88.89%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 R+KV+ P+VEMDGDEMTRIIWQ IK+KLI P++D+ +KY+DLG+ NRD T+D+VT++SA AT KY+VA+KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFREPI+C+NIPR+VPGW KPI IGRHA GDQY+ATD V+ Sbjct: 43 RIKVEKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVV 186
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHP_MOUSE (Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus GN=Idh2 PE=1 SV=3) HSP 1 Score: 233.032 bits (593), Expect = 1.186e-60 Identity = 104/144 (72.22%), Postives = 128/144 (88.89%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 R+KV+ P+VEMDGDEMTRIIWQ IK+KLI P++D+ +KY+DLG+ NRD T+D+VT++SA AT KY+VA+KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFREPI+C+NIPR+VPGW KPI IGRHA GDQY+ATD V+ Sbjct: 43 RIKVEKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVV 186
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHP_MACFA (Isocitrate dehydrogenase [NADP], mitochondrial OS=Macaca fascicularis GN=IDH2 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.186e-60 Identity = 105/143 (73.43%), Postives = 126/143 (88.11%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTV 707 R+KV P+VEMDGDEMTRIIWQ IK+KLI P++D+ +KY+DLG+ NRD TDD+VT++SA AT KY+VA+KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFREPI+C+NIPR+VPGW KPI IGRHA GDQY+ATD V Sbjct: 43 RIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDIQLKYFDLGLPNRDQTDDQVTIDSALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFV 185 The following BLAST results are available for this feature:
BLAST of FC931309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931309 ID=FC931309; Name=FC931309; organism=Citrus clementina; type=EST; length=715bpback to top |