FC931311

Overview
NameFC931311
Unique NameFC931311
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4548 contig Ccv1_Contig4548:40..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.031e-54
Identity = 103/194 (53.09%), Postives = 133/194 (68.56%), Query Frame = 1
Query:   55 LFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            LF+  ++ I+S +  TS+AQL+ TFY+ +CPN   I R  + +A+    R  AS++RL FHDCFVNGCD S+LLDDT +   EKNAGPN NSARGF V+D IKT LE AC   VSC+D+LA+A+   V+L GGP+WTV LGRRD+ TA+ + ANS IP P  SL+ +   F+A GL   D+  LSG H  G AR
Sbjct:   12 LFIISLIVIVSSIFGTSSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRAR 205          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 1.964e-53
Identity = 102/203 (50.25%), Postives = 133/203 (65.52%), Query Frame = 1
Query:   34 MASSISYLFVTLILTIISLLACTST--AQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            MA   S+L +  ++  + L  C  +   +L P +YA SCP    I R  + KAV R+ R AAS+LRL FHDCFV GCDGS+LLD +     EKN+ PN  SARGF+V+D IK  LE  C  TVSCAD+L +AARD   L GGP+W VPLGRRD+R+AS S +N+ IP P+++  T++S F  +GL   D+  LSG H IGF+R
Sbjct:    1 MARLTSFLLLLSLICFVPLCLCDKSYGGKLFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSR 203          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.837e-52
Identity = 99/177 (55.93%), Postives = 126/177 (71.19%), Query Frame = 1
Query:  106 TAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            T+ L+  FY  SCP  Q I +  + +A     R AAS+LRL FHDCFVNGCDGS+LL+D+  F GEKNA PNRNS RGFEVI+ IK+ +E++C  TVSCADI+A+AAR+ V L GGP W VPLGRRD+ TAS+ AAN+ +P P  +L  + + F   GL  +D+ VLSG H IGFA+
Sbjct:   45 TSNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQ 221          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.096e-51
Identity = 100/197 (50.76%), Postives = 129/197 (65.48%), Query Frame = 1
Query:   37 ASSISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            +S+    F+  ++ I+S L  TS+AQL+ TFY+ +CPN   I R  + +A+    R   S++RL FHDCFVNGCDGS+LLDDT++   EKNA  N NS RGF V+D+IKT LE AC   VSC+DILA+A+   V+L GGP+WTV LGRRD  TA+ S ANS +P P   L  + S F A GL   D+  LSG H  G
Sbjct:    7 SSTCDGFFIISLIVIVSSLFGTSSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFG 203          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.349e-51
Identity = 104/206 (50.49%), Postives = 128/206 (62.14%), Query Frame = 1
Query:   34 MASSISYLFVTLILTIISLLACTSTAQ-----LSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            MA S++ L   L L   S     S A      L P FY  SCP  Q I +  + KA    PR  AS+LRL FHDCFV GCD S+LLD + T   EK + PNRNSARGFE+I+ IK  LE  C  TVSCADILA+AARD   + GGP+W VPLGRRDAR AS S +N+ IP P+++  T+++ F  +GL   D+  LSG H IG +R
Sbjct:    1 MAKSLNILIAALSLIAFSPFCLCSKAYGSGGYLFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSR 206          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.192e-50
Identity = 100/209 (47.85%), Postives = 132/209 (63.16%), Query Frame = 1
Query:   34 MASSISYLFVTLILTIISLLACTST--------AQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            MA   S+L +  ++  ++L  C             L P FY +SCP  + I R  + KAV R+ R AAS++RL FHDCFV GCDGS+LLD + +   EKN+ PN  SARGFEV+D IK  LE  C  TVSCAD L +AARD   L GGP+W VPLGRRD+ +AS S +N+ IP P+++  T+++ F  +GL   D+  LSG H IGF+R
Sbjct:    1 MARIGSFLIILYLIYALTLCICDDDESNYGGDKGNLFPGFYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSR 209          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 2.655e-50
Identity = 105/201 (52.24%), Postives = 129/201 (64.18%), Query Frame = 1
Query:   31 FMASSISYLFVTLI-LTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLT-AQDMTVLSGGHAIG 627
            F +SS  +  +TLI L  + L A  S AQL+PTFY  SCPN   I RD +   +   PR AASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF VID +K  +E+AC  TVSCAD+L +AA+  V L GGP+W VPLGRRD+  A    AN+ +P P  +L  L   F   GL  + D+  LSGGH  G
Sbjct:    3 FSSSSTLFTCITLIPLVCLILHASLSDAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFG 203          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 3.467e-50
Identity = 99/179 (55.31%), Postives = 119/179 (66.48%), Query Frame = 1
Query:  100 TSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            +S A LSP FY  SCPN Q I +  +  A    PR AASILRL FHDCFVNGCD SVLLD + T   EK +  NR+SARGFEVID IK+ LE  C  TVSCAD+LA+ ARD + + GGP+W V LGRRDAR AS   +   IP P S+L T+++MF  +GL   D+  L G H IG +R
Sbjct:   36 SSVASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSR 214          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.529e-50
Identity = 98/169 (57.99%), Postives = 119/169 (70.41%), Query Frame = 1
Query:  130 YATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            Y  SCP  + I    +   V   PR AAS+LRL FHDCFVNGCD SVLLDDT    GEK A PN NS RGFEVID+IK+ +E+ C  TVSCADILA+AARD V + GGP W V +GR+D+RTAS+ AA + +P P+S+++TLIS F   GL+  DM  LSGGH +G AR
Sbjct:   55 YRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKAR 223          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.725e-50
Identity = 101/197 (51.27%), Postives = 125/197 (63.45%), Query Frame = 1
Query:   40 SSISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIG 627
            SS S+ ++ + L  ++  A  S AQL+PTFY TSCPN   I RD +   +   PR  ASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF  +D IK  +E AC  TVSCAD+L +AA+  V L GGP+W VPLGRRD+  A    AN+ +P P  +L  L   FA  GL    D+  LSGGH  G
Sbjct:    5 SSTSFTWILITLGCLAFYASLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFG 201          
The following BLAST results are available for this feature:
BLAST of FC931311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER53_ARATH3.031e-5453.09Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER49_ARATH1.964e-5350.25Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER10_ARATH2.837e-5255.93Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER54_ARATH4.096e-5150.76Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER72_ARATH5.349e-5150.49Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER15_ARATH1.192e-5047.85Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER1A_ARMRU2.655e-5052.24Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER36_ARATH3.467e-5055.31Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER40_ARATH4.529e-5057.99Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER1B_ARMRU7.725e-5051.27Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34103G06EF PostHarvP1 Citrus clementina cDNA clone C34103G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931311 ID=FC931311; Name=FC931311; organism=Citrus clementina; type=EST; length=638bp
ATCTGCTTTAACTTTCCATTTTTGGATTGGTTCATGGCATCTTCAATTTC
TTATTTGTTTGTTACACTTATACTCACAATTATATCCCTTCTAGCTTGCA
CCTCCACTGCGCAACTTTCTCCAACCTTTTATGCAACATCTTGCCCCAAT
TTTCAAAGAATCGCGAGGGATGAAATGACCAAAGCTGTTAATAGACAACC
GCGTAATGCTGCCTCTATTCTTCGCCTCTTCTTCCATGACTGCTTCGTTA
ATGGCTGCGATGGGTCGGTACTACTAGATGACACAGCCACATTCACCGGC
GAGAAGAATGCAGGACCAAACAGAAACTCTGCTAGGGGTTTCGAAGTGAT
TGACGCCATTAAAACTCGTCTGGAAGCAGCTTGCAACGCCACCGTTTCAT
GTGCCGACATCCTTGCTGTTGCAGCCCGAGACGGTGTCGCCTTGCTTGGA
GGACCGACTTGGACGGTACCGCTCGGCCGGCGAGATGCAAGAACGGCCAG
TCAGAGTGCAGCCAATAGCCAAATCCCTGGACCATCCTCCAGCCTGGCAA
CACTCATATCAATGTTTGCAGCCAAAGGCCTGACCGCCCAAGACATGACA
GTCCTCTCCGGCGGCCACGCCATCGGATTCGCTCGATG
back to top