FC931311

Overview
NameFC931311
Unique NameFC931311
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4548 contig Ccv1_Contig4548:40..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.205e-30
Identity = 77/176 (43.75%), Postives = 94/176 (53.41%), Query Frame = 1
Query:  112 QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTA-TFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVAL-LGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            +L   FY  SCP  + I R  + K V      A  +LR+ +HDCFV GCD S+LLD  A     EK A PN  S  GFE+ID IK  LE  C  TVSCADIL +AARD V+     P W V  GR D R +  + A   +P   ++  TL  +FA   L   D+  LSG H IG A
Sbjct:   45 KLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNL-SLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIA 219          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.160e-29
Identity = 74/176 (42.05%), Postives = 98/176 (55.68%), Query Frame = 1
Query:  109 AQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVL-SGGHAIGFA 633
            AQL   FY  +CP  + I    +    +R     A++LR+ FHDC V GCD S+L+D T     EK+ G N    RGFE+ID  K  LE  C  TVSCADI+ +A RD +AL GGP + V  GRRD   ++ S  + ++ GP+ S+AT I  F + G     M  L  GGH +G A
Sbjct:   20 AQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEKSVGRNAG-VRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPS--DVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVA 192          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.374e-29
Identity = 79/200 (39.50%), Postives = 112/200 (56.00%), Query Frame = 1
Query:   34 MASSISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALL-GGPT-WTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            MA  IS + V ++   +         QL   FY+ +C N + I    + +A  +    A +++RL+FHDCF NGCD S+LLD +     EK A PN  S RG+EVID IK+ +E  C+  VSCADI+A+A RD V L  GG T + +P GR D + +  SA    +P P  ++A   + F  + L+  DM +L GGH IG
Sbjct:    1 MAVKISTIEVLILSLALLSFGHGCYGQLRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGS---NSEKKASPNL-SVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKIS--SALLVDLPSPKMTVAETAAKFDQRKLSLNDMVLLLGGHTIG 194          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.872e-28
Identity = 68/173 (39.31%), Postives = 94/173 (54.34%), Query Frame = 1
Query:  115 LSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            LS  +Y   CP+F++I   ++ +          ++LRL FHDC V GCD SVLLD    + G +   P   + RGFE+ID IK+ +E +C   VSCADIL  A+R     LGGP W    GRRD++  S +    ++P     +  L+  F + GL   D+ VLSG H IG A
Sbjct:   51 LSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLD----YEGTERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSK-HSYARDVEKVPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKA 218          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.956e-25
Identity = 66/163 (40.49%), Postives = 90/163 (55.21%), Query Frame = 1
Query:  139 SCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            +C + +   R ++ K        A  +LRL + DC VNGCDGS+LL        E+ A  NR    GF +ID IK  LE+ C   VSCADIL +A RD V + G P++ V  GRRD  T +  A +  +P PS S+   ++ F +KGL   DMT L G H++G
Sbjct:   45 TCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGP---NSERTAPQNRGLG-GFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMG 201          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.860e-25
Identity = 64/195 (32.82%), Postives = 99/195 (50.77%), Query Frame = 1
Query:   67 LILTIISLLACTSTAQ--------LSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            +++ I+ L A ++T++        L   FY  +CP  + I R+++     R    A S LR  FHDC V  CD S+LLD T    GEK    +    R F  I+ IK  LE  C   VSC+DIL ++AR+G+  +GGP   +  GRRD   +      S +P  + S++ ++  F + G+    +  L G H++G
Sbjct:    7 MMVAILCLWALSATSEAVTEAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFG-LRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVG 200          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.042e-25
Identity = 66/191 (34.55%), Postives = 99/191 (51.83%), Query Frame = 1
Query:   58 FVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGP-TWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            F  L+L + S+       +L   +Y  SCP  + I R ++     +    A S LR  FHDC V  CD S+LL+ TA     +         R F+ +  IK  LE  C +TVSCADI+A++ARDG+ +L GP    +  GRRD+R +      + IP  + SL+++IS F + G+  +    L G H++G
Sbjct:   12 FFCLLLQLFSIFHI-GNGELEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLE-TARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVG 200          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.268e-24
Identity = 66/163 (40.49%), Postives = 87/163 (53.37%), Query Frame = 1
Query:  139 SCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            +C N +   R ++          A  +LRL + DCFV+GCD SVLL+       EK A  NR    GF +ID IK  LE  C   VSCADIL +A RD V L G P++ V  GRRD  T+ +   +  +P PS S    +S F ++GL   DM  L G H++G
Sbjct:   45 TCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGP---NSEKMAPQNRGLG-GFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMG 201          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PERX_WHEAT (Peroxidase (Fragment) OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.518e-21
Identity = 50/78 (64.10%), Postives = 62/78 (79.49%), Query Frame = 1
Query:  334 RGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMF 567
            RGF VID+IKT++EA CN TVSCADIL VAARD V  LGGP+WTVPLGRRD+  A+++ ANS +PG +SS + L + F
Sbjct:    3 RGFGVIDSIKTQIEAICNQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANEAEANSDLPGFNSSRSELEAAF 80          
The following BLAST results are available for this feature:
BLAST of FC931311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER24_ARATH5.205e-3043.75Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER8_ARATH1.160e-2942.05Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER60_ARATH3.374e-2939.50Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER7_ARATH4.872e-2839.31Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER61_ARATH2.956e-2540.49Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER42_ARATH3.860e-2532.82Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH5.042e-2534.55Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER26_ARATH3.268e-2440.49Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PERX_WHEAT1.518e-2164.10Peroxidase (Fragment) OS=Triticum aestivum PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionC34103G06EF PostHarvP1 Citrus clementina cDNA clone C34103G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931311 ID=FC931311; Name=FC931311; organism=Citrus clementina; type=EST; length=638bp
ATCTGCTTTAACTTTCCATTTTTGGATTGGTTCATGGCATCTTCAATTTC
TTATTTGTTTGTTACACTTATACTCACAATTATATCCCTTCTAGCTTGCA
CCTCCACTGCGCAACTTTCTCCAACCTTTTATGCAACATCTTGCCCCAAT
TTTCAAAGAATCGCGAGGGATGAAATGACCAAAGCTGTTAATAGACAACC
GCGTAATGCTGCCTCTATTCTTCGCCTCTTCTTCCATGACTGCTTCGTTA
ATGGCTGCGATGGGTCGGTACTACTAGATGACACAGCCACATTCACCGGC
GAGAAGAATGCAGGACCAAACAGAAACTCTGCTAGGGGTTTCGAAGTGAT
TGACGCCATTAAAACTCGTCTGGAAGCAGCTTGCAACGCCACCGTTTCAT
GTGCCGACATCCTTGCTGTTGCAGCCCGAGACGGTGTCGCCTTGCTTGGA
GGACCGACTTGGACGGTACCGCTCGGCCGGCGAGATGCAAGAACGGCCAG
TCAGAGTGCAGCCAATAGCCAAATCCCTGGACCATCCTCCAGCCTGGCAA
CACTCATATCAATGTTTGCAGCCAAAGGCCTGACCGCCCAAGACATGACA
GTCCTCTCCGGCGGCCACGCCATCGGATTCGCTCGATG
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