FC931311

Overview
NameFC931311
Unique NameFC931311
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4548 contig Ccv1_Contig4548:40..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.725e-50
Identity = 99/208 (47.60%), Postives = 129/208 (62.02%), Query Frame = 1
Query:   34 MASSISYLFVTLILTIISLLACTSTAQ-------LSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            MA   S+L +  +   ++L  C + +        L P FY +SCP  + I R  + KA  R+ R AAS++RL FHDCFV GCDGS+LLD + +   EKN+ PN  SARGFEV+D IK  LE  C  TVSCAD L +AARD   L GGP+WTVPLGRRD+ TAS++  N  +P P +   T+   F+ +GL   D+  LSG H IGF+R
Sbjct:    1 MARIGSFLILLSLTYALTLCICDNASNFGGNKRNLFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSR 208          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.721e-49
Identity = 108/189 (57.14%), Postives = 125/189 (66.14%), Query Frame = 1
Query:   73 LTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTG-EKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            L ++  LA  ++ QLS TFY TSCP      +  +  AV+  PR  AS+LRL FHDCF  GCD SVLL      TG E+NAGPN  S RGF VID IKT+LE+ C  TVSCADIL VAARD V  LGGP+WTVPLGRRD+ TAS S ANS +PGPSSS + L + F  K L   DM  LSG H IG A+
Sbjct:   11 LVVLVALATAASGQLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLL------TGMEQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQ 191          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.834e-49
Identity = 98/188 (52.13%), Postives = 126/188 (67.02%), Query Frame = 1
Query:   73 LTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            L ++S + C   AQLS TFY  +CPN     R  + +A++ + R AAS++RL FHDCFV GCD S+LLD+T +   EK A PN  SARGF +I+  K  +E  C   VSCADIL VAARD  A +GGP+WTV LGRRD+ TAS++ A + +PGP   L  LIS FA+KGL+ +DM  LSG H IG A+
Sbjct:   17 LLLLSCMQCH--AQLSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQ 202          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 3.834e-49
Identity = 102/200 (51.00%), Postives = 128/200 (64.00%), Query Frame = 1
Query:   31 FMASSISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIG 627
            F  SS+S     + L  + L +  S+AQL+PTFY  +CP+   I RD +   +   PR AASILRL FHDCFVNGCD S+LLD+T +F  EK+A PN NSARGF VID +K  +E AC  TVSCADIL +AA+  V L GGP+W VPLGRRD+  A  + AN+ +P P  +L  L + F   GL    D+  LSGGH  G
Sbjct:    3 FSYSSLSTWTTLMTLGCLLLHSSISSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFG 202          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.007e-49
Identity = 94/175 (53.71%), Postives = 118/175 (67.43%), Query Frame = 1
Query:  112 QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            QL+ TFY+ +CPN   I R  + +A     R  AS++RL FHDCFV+GCD S+LLDD+ +   EKNAGPN NSARGF V+D IKT LE  C   VSC+DILA+A+   V+L GGP+WTV LGRRD+ TA+ + ANS IP P   L+ + S F+A GL   D+  LSG H  G AR
Sbjct:    1 QLNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRAR 175          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.007e-49
Identity = 100/181 (55.25%), Postives = 119/181 (65.75%), Query Frame = 1
Query:   88 LLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLT-AQDMTVLSGGHAIG 627
            L A  S AQL+PTFY  SCPN   I RD +   +   P  AASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF V+D IK  +E AC  TVSCAD+L +AA+  V L GGP+W VPLGRRD+R A    AN+ +P PS +L  L + FA  GL    D+  LSGGH  G
Sbjct:    2 LHASFSNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFG 182          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.115e-48
Identity = 102/202 (50.50%), Postives = 128/202 (63.37%), Query Frame = 1
Query:   31 FMASSISYLFVTLILTIISLLACTS--TAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIG 627
            F +SSI+    T+++T+  L+ C S   AQL+PTFY TSCP    I RD +   +   PR A SILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF VID +K  +E AC  TVSCAD+L +AA+  V L GGP+W VPLGRRD+  A    AN+ +P P  +L  L + F   GL    D+  LSG H  G
Sbjct:    3 FSSSSITSFTWTVLITVGCLMLCASFSDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFG 204          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.457e-48
Identity = 111/202 (54.95%), Postives = 133/202 (65.84%), Query Frame = 1
Query:   34 MASSISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAK-GLTAQDMTVLSGGHAIGFAR 636
            MASS SY   T +L +++L+   S AQLSPTFY TSCP      +  +  AV   PR  AS+LRL FHDCFV GCD SVLL        E+NA PN  S RGF VID+IKT++EA C  TVSCADIL VAARD V  LGGP+WTVPLGRRD+  A+++ AN+ +PG +SS A L + F  K GL   DM  LSG H IG A+
Sbjct:    1 MASS-SY---TSLLVLVALVTAAS-AQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSGM-----EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQ 192          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.903e-48
Identity = 104/201 (51.74%), Postives = 127/201 (63.18%), Query Frame = 1
Query:   31 FMASSISYLFVTLI-LTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIG 627
            F +SS S  +  LI L  + L A  S AQL+PTFY  SCPN   I R+ +   +   PR AASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF VID +K  +E AC  TVSCAD+L +AA+  V L GGP+W VPLGRRD+  A    AN+ +P P  +L  L + F   GL    D+  LSGGH  G
Sbjct:    3 FSSSSTSSTWTILITLGCLMLHASLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFG 203          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.536e-48
Identity = 102/199 (51.26%), Postives = 128/199 (64.32%), Query Frame = 1
Query:   34 MASSISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIG 627
            M SS+  L   L+L  +SL    S AQLSP+FY  +CP    I  + +  A+   PR AASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF+VID +K  +E AC  TVSCAD+LA+AA++ + L GGP+W VP GRRD+       AN  +PGPSS+L  L   F   GL  + D+  LSGGH  G
Sbjct:    1 MHSSLIKLGFLLLLLQVSL----SHAQLSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFG 195          
The following BLAST results are available for this feature:
BLAST of FC931311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER14_ARATH7.725e-5047.60Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER1_WHEAT1.721e-4957.14Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PERX_NICSY3.834e-4952.13Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER32_ARATH3.834e-4951.00Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PERA2_ARMRU5.007e-4953.71Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER1C_ARMRU5.007e-4955.25Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER33_ARATH1.115e-4850.50Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER1_HORVU1.457e-4854.95Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER34_ARATH1.903e-4851.74Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER38_ARATH5.536e-4851.26Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34103G06EF PostHarvP1 Citrus clementina cDNA clone C34103G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931311 ID=FC931311; Name=FC931311; organism=Citrus clementina; type=EST; length=638bp
ATCTGCTTTAACTTTCCATTTTTGGATTGGTTCATGGCATCTTCAATTTC
TTATTTGTTTGTTACACTTATACTCACAATTATATCCCTTCTAGCTTGCA
CCTCCACTGCGCAACTTTCTCCAACCTTTTATGCAACATCTTGCCCCAAT
TTTCAAAGAATCGCGAGGGATGAAATGACCAAAGCTGTTAATAGACAACC
GCGTAATGCTGCCTCTATTCTTCGCCTCTTCTTCCATGACTGCTTCGTTA
ATGGCTGCGATGGGTCGGTACTACTAGATGACACAGCCACATTCACCGGC
GAGAAGAATGCAGGACCAAACAGAAACTCTGCTAGGGGTTTCGAAGTGAT
TGACGCCATTAAAACTCGTCTGGAAGCAGCTTGCAACGCCACCGTTTCAT
GTGCCGACATCCTTGCTGTTGCAGCCCGAGACGGTGTCGCCTTGCTTGGA
GGACCGACTTGGACGGTACCGCTCGGCCGGCGAGATGCAAGAACGGCCAG
TCAGAGTGCAGCCAATAGCCAAATCCCTGGACCATCCTCCAGCCTGGCAA
CACTCATATCAATGTTTGCAGCCAAAGGCCTGACCGCCCAAGACATGACA
GTCCTCTCCGGCGGCCACGCCATCGGATTCGCTCGATG
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