FC931311

Overview
NameFC931311
Unique NameFC931311
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4548 contig Ccv1_Contig4548:40..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.611e-47
Identity = 103/192 (53.65%), Postives = 128/192 (66.67%), Query Frame = 1
Query:   67 LILTIISL-LACTST-AQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            ++LT+ +L + C++  AQLSP  YA SCPN  +I RD++  A+  + R AAS++RL FHDCFVNGCD SVLLD T     EK A PN NS RGFEVID IK  +E AC   VSCADIL +AARD V L GGP W V LGR+D   A+QS+AN+ +P P   L  +I+ FAA GL   D+  LSG H  G A+
Sbjct:   12 VLLTVFTLCMLCSAVRAQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGT---NSEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANN-LPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAK 199          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.747e-47
Identity = 99/202 (49.01%), Postives = 125/202 (61.88%), Query Frame = 1
Query:   34 MASSISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTAT-FTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            MAS    L + L + I S     S AQLS TFY+T+CPN   I R  + +A+    R   S++RL FHDCFV+GCDGS+LLD+  T    EK+A PN NS RGF+V+D IKT +E AC   VSC DILA+A+   V+L GGP+W V LGRRD RTA+Q  AN+ +P P  +L  L   F   GL   D+  LSG H  G A+
Sbjct:    1 MASFSPLLAMALAIFIFS---SHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQ 199          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.686e-47
Identity = 102/198 (51.52%), Postives = 126/198 (63.64%), Query Frame = 1
Query:   37 ASSISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIG 627
            +SS+  L   L+L  +SL    S AQLSP+FY  +CP    IA + +  A+   PR AASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N  SARGF+VID +K  +E AC  TVSCAD+LA+AA+  V L GGP+W VP GRRD+       AN  +PGPSS+L  L   F   GL    D+  LSGGH  G
Sbjct:    4 SSSLIKLGFLLLLLNVSL----SHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFG 197          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.121e-47
Identity = 102/202 (50.50%), Postives = 137/202 (67.82%), Query Frame = 1
Query:   40 SSISYLFVTLILTIIS--LLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            SS S L ++L++ +++  L A T++AQLS TFY TSCP+        +  AV +Q R  AS+LRL FHDCF+ GCD S+LL+DT+   GE+   PN   + R F+V+++IK ++EAAC   VSCADILAVAARDGV  LGGP+WTV LGRRD+ T S  +  S +P P+SSL  L++ ++ K L A DM  LSG H IG A+
Sbjct:    4 SSGSCLIISLLVVVVAAALSASTASAQLSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDTS---GEQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TGSFPSQTSDLPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQ 201          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.994e-47
Identity = 103/205 (50.24%), Postives = 136/205 (66.34%), Query Frame = 1
Query:   34 MASSISYLFV---TLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            MA+S+S   +   + +  ++  LA  ++AQLS TFY  SCPN     R  +  AV ++PR  AS+LRL FHDCFV GCD S+LL+DT   +GE++ GPN   + RGF V+++IK ++E+ C   VSCADILAVAARDGV  LGGP+WTV LGRRD+ TAS +   S +P P+SSL  L+S +  K L   DM  LSG H IG A+
Sbjct:    1 MAASVSASCLNRLSSLAVVLVALASAASAQLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDT---SGEQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TASFAGQTSDLPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQ 201          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.364e-46
Identity = 99/191 (51.83%), Postives = 122/191 (63.87%), Query Frame = 1
Query:   67 LILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLT-AQDMTVLSGGHAIGFAR 636
            LIL+ + L A  S AQL P FY  +CP+   I  D +   +   PR AAS+LRL FHDCFV GCD S+LLD++ +F  EK+A PN NSARGF VID +KT LE AC  TVSCAD+L +A++  V L GGP W VPLGRRD+  A    AN+ +P P  +LA L   FA  GL    D+  LSGGH  G A+
Sbjct:   15 LILSCLLLQASNSNAQLRPDFYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQ 205          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.364e-46
Identity = 95/190 (50.00%), Postives = 126/190 (66.32%), Query Frame = 1
Query:   67 LILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            L LT+++++    T  L P FY+ +CP  + I R EM KA+ ++ R+ AS++R  FHDCFVNGCD S+LLDDT    GEK +  N +S R FEV+D IK  LE AC ATVSCADI+ +AARD VAL GGP W V LGR+D+ TASQ  ++  +P P ++   LI +F    L+ +DM  LSG H+IG  R
Sbjct:    9 LYLTLLTVVVTGET--LRPRFYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGR 196          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.326e-46
Identity = 102/199 (51.26%), Postives = 125/199 (62.81%), Query Frame = 1
Query:   34 MASSISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIG 627
            M SS+  L   L+L  +SL    S AQLSP+FY  +CP    IA   +  A+   PR AASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF+VID +K  +E AC  TVSCAD+LA+AA++ V L GGP+W VP GRRD+       AN  +P P  +L  L   F   GL  A D+  LSGGH  G
Sbjct:    1 MHSSLIKLGFLLLLIQVSL----SHAQLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFG 195          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.967e-46
Identity = 86/197 (43.65%), Postives = 123/197 (62.44%), Query Frame = 1
Query:   46 ISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            + ++  T+ +   S         L+  +Y ++CP    + + EM   V   PRNAA I+RL FHDCFV GCDGSVLLD+T T  GEK A PN NS +G++++D IK  +E+ C   VSCAD+L + ARD   L+GGP W VP+GR+D++TAS   A + +P P   L ++I+ F ++GL+ +DM  L G H IG A+
Sbjct:    7 VFFMVHTIFIPCFSFDTPGKDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQ 203          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.181e-46
Identity = 105/194 (54.12%), Postives = 122/194 (62.89%), Query Frame = 1
Query:   73 LTIISLLACTSTA------QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            L++I L A T++        L   FY  SCP  + I +  +  AV + PR AAS+LRL FHDCFV GCD SVLLD       EK A PN NS RGFEVID IK  LE AC  TVSC+DILA+AARD V L GGP W V LGRRD+  AS + AN  IP P+SSL +LI  F  +GL  QD+  LSG H IG AR
Sbjct:   10 LSLIVLYAITTSVLGDFGEPLLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKAR 203          
The following BLAST results are available for this feature:
BLAST of FC931311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PERN_ARMRU1.611e-4753.65Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER15_IPOBA2.747e-4749.01Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER2_ARMRU4.686e-4751.52Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER42_MAIZE6.121e-4750.50Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER66_MAIZE7.994e-4750.24Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER3_ARMRU1.364e-4651.83Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER17_ARATH1.364e-4650.00Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER37_ARATH2.326e-4651.26Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER11_ARATH3.967e-4643.65Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER20_ARATH5.181e-4654.12Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34103G06EF PostHarvP1 Citrus clementina cDNA clone C34103G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931311 ID=FC931311; Name=FC931311; organism=Citrus clementina; type=EST; length=638bp
ATCTGCTTTAACTTTCCATTTTTGGATTGGTTCATGGCATCTTCAATTTC
TTATTTGTTTGTTACACTTATACTCACAATTATATCCCTTCTAGCTTGCA
CCTCCACTGCGCAACTTTCTCCAACCTTTTATGCAACATCTTGCCCCAAT
TTTCAAAGAATCGCGAGGGATGAAATGACCAAAGCTGTTAATAGACAACC
GCGTAATGCTGCCTCTATTCTTCGCCTCTTCTTCCATGACTGCTTCGTTA
ATGGCTGCGATGGGTCGGTACTACTAGATGACACAGCCACATTCACCGGC
GAGAAGAATGCAGGACCAAACAGAAACTCTGCTAGGGGTTTCGAAGTGAT
TGACGCCATTAAAACTCGTCTGGAAGCAGCTTGCAACGCCACCGTTTCAT
GTGCCGACATCCTTGCTGTTGCAGCCCGAGACGGTGTCGCCTTGCTTGGA
GGACCGACTTGGACGGTACCGCTCGGCCGGCGAGATGCAAGAACGGCCAG
TCAGAGTGCAGCCAATAGCCAAATCCCTGGACCATCCTCCAGCCTGGCAA
CACTCATATCAATGTTTGCAGCCAAAGGCCTGACCGCCCAAGACATGACA
GTCCTCTCCGGCGGCCACGCCATCGGATTCGCTCGATG
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