FC931311

Overview
NameFC931311
Unique NameFC931311
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4548 contig Ccv1_Contig4548:40..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.475e-42
Identity = 94/202 (46.53%), Postives = 124/202 (61.39%), Query Frame = 1
Query:   40 SSISYLFVTLILTIISL---LACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            SS + L V L + +IS+   ++C   AQLS TFY T+CP      R  +  +V+   RNAA ++RL FHDCFV GCD S+LL       G + A P  +   G+EVIDA K  +E  C   VSCADILAVAARD    +GGP+WTV LGRRD+ T++ + A + +P  +  L+ LIS FA KGL  ++M  LSG H +G AR
Sbjct:    6 SSGTILMVPLFMLLISVNYFMSCN--AQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGA----GSERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQAR 201          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.539e-42
Identity = 94/202 (46.53%), Postives = 124/202 (61.39%), Query Frame = 1
Query:   40 SSISYLFVTLILTIISL---LACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            SS + L V L + +IS+   ++C   AQLS TFY T+CP      R  +  +V+   RNAA ++RL FHDCFV GCD S+LL       G + A P  +   G+EVIDA K  +E  C   VSCADILAVAARD    +GGP+WTV LGRRD+ T++ + A + +P  +  L+ LIS FA KGL  ++M  LSG H +G AR
Sbjct:    6 SSGTTLMVPLFMLLISVNYFMSCN--AQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGA----GSERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQAR 201          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.743e-42
Identity = 79/187 (42.25%), Postives = 118/187 (63.10%), Query Frame = 1
Query:   67 LILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            L++ +I  L   S AQL   FY  +CP  ++I +D + + +N  P  AA ++R+ FHDCFV GCDGS+L++ T++    +   P   + RGF+ ID +K+ LE+ C   VSCADI+ +A RD +  +GGPTW VP GRRD R ++ + A + IP P  +  TLI++F  +GL  +D+ +LSG H IG
Sbjct:    9 LMILVIQGLVTFSEAQLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIG 195          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.843e-41
Identity = 95/199 (47.74%), Postives = 120/199 (60.30%), Query Frame = 1
Query:   55 LFVTLILTIISLLACTSTAQLSPT------FYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            L +T +  +I  +   +TA+  P       FY T+CP  + I R+ +    +  PR A  ILR+ FHDCFV GCDGS+L+    T   E+ AGPN N  +GFEVID  KT+LEAAC   VSCADILA+AARD V L  G  W VP GRRD R +  S AN+ +PGP  S+A     F+A GL  +D+ VL GGH IG A
Sbjct:    9 LLITFLNCLIISVHGQATARPGPVSGTRIGFYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGANT---ERTAGPNLN-LQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNANN-LPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTA 202          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.019e-41
Identity = 94/191 (49.21%), Postives = 112/191 (58.64%), Query Frame = 1
Query:   61 VTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTAT--FTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            + L+L  I +    S AQL+  FY+T+CPN   IAR  + +A     R  A ++RL FHDCFVNGCDGSVLLD        GEK A  N  S  GFEVID IKT LE  C   VSCADILA+AA   VAL GGP+  V LGRRD RTA ++ A + +P    SL  L S F+   L   D+  LSG H  G
Sbjct:    7 IPLVLLPILMFGVLSNAQLTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFG 197          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.019e-41
Identity = 84/153 (54.90%), Postives = 108/153 (70.59%), Query Frame = 1
Query:  184 AVNRQPRNAASILRLFFHDCFVNGCDGSVLLDD-TATFTGEKNAGPNRNSARGFEVIDAIKTRLEAAC-NATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            A++ + R  AS++RL FHDCFV+GCDG +LLDD   TFTGE+N+ PN NS RGFEVI   K  +  +C N +VSCADILA+AARD +A LGG T+TV LGR DA TA+ S A +Q+P PS +L   I  F+ K  T ++M  L+G H +GFAR
Sbjct:   92 AIDNETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFAR 244          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.554e-41
Identity = 89/187 (47.59%), Postives = 114/187 (60.96%), Query Frame = 1
Query:   67 LILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            L LT + +  C S   L   FY TSC   + I +DE+ K   R    A  ++R+ FHDCFV GCDGSVL+D T + T EK++  N  S RGFEVID+ K RLEA C   VSCADI+A AARD V + GG  + VP GRRD R +  S A++ +P P+ ++  L   F+ KGLT  +M  LSG H IG
Sbjct:   48 LSLTWVLVFLCLS---LQVGFYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIG 231          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.554e-41
Identity = 89/193 (46.11%), Postives = 120/193 (62.18%), Query Frame = 1
Query:   70 ILTIISLLACTSTAQLSPT-----FYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            IL ++ LL+    +   P      +Y + CP  + I R    + V+RQ   AA +LR+ FHDCFV GCDGSVLL  +A    E++A PN  + +G+EV+DA KT LE  C   +SCAD+LA+ ARD VA++GGP W VPLGRRD R +  + A   +P P + + TL   FA KGL A+D+ VLSGGH IG +
Sbjct:    6 ILALVVLLSVVGVSVAIPQLLDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLK-SAKNDAERDAVPNL-TLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGIS 196          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.560e-41
Identity = 85/188 (45.21%), Postives = 120/188 (63.83%), Query Frame = 1
Query:   73 LTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            L ++ L   T+ ++L+  FY+ +CP F  I RD +T      P  AA+++RLFFHDCF NGCD SVL+  TA  T E+++  N +    GF+VI   KT LE AC  TVSC+DI++VA RD +  +GGP + V LGRRD+RT+  S     +P PS+ ++ +I  F +KG T Q+M  LSG H+IGF+
Sbjct:    7 LFLLFLFFFTAQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFS 194          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.118e-40
Identity = 90/196 (45.92%), Postives = 119/196 (60.71%), Query Frame = 1
Query:   73 LTIISLLACTSTAQLS--------PTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            LTII LL C S   LS          FY+ SCP F  I R+ +T      P  AA+ LRLFFHDCF NGCD SVL+  TA  T E+++  N +    GF+V+   KT LE AC  TVSC+DI+AVA RD +  +GGP + + LGRRD+RT+  S  +  +P PS  ++ LI  F+++G + Q+M  LSG H IGF+
Sbjct:   10 LTIILLLLCLSFQSLSFAAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFS 205          
The following BLAST results are available for this feature:
BLAST of FC931311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER1_ZINEL3.475e-4246.53Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER2_ZINEL4.539e-4246.53Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER39_ARATH7.743e-4242.25Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER71_ARATH3.843e-4147.74Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER58_ARATH5.019e-4149.21Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER2_SOLLC5.019e-4154.90Suberization-associated anionic peroxidase 2 OS=So... [more]
PER5_VITVI6.554e-4147.59Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER1_ARATH6.554e-4146.11Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER31_ARATH8.560e-4145.21Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER63_ARATH1.118e-4045.92Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34103G06EF PostHarvP1 Citrus clementina cDNA clone C34103G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931311 ID=FC931311; Name=FC931311; organism=Citrus clementina; type=EST; length=638bp
ATCTGCTTTAACTTTCCATTTTTGGATTGGTTCATGGCATCTTCAATTTC
TTATTTGTTTGTTACACTTATACTCACAATTATATCCCTTCTAGCTTGCA
CCTCCACTGCGCAACTTTCTCCAACCTTTTATGCAACATCTTGCCCCAAT
TTTCAAAGAATCGCGAGGGATGAAATGACCAAAGCTGTTAATAGACAACC
GCGTAATGCTGCCTCTATTCTTCGCCTCTTCTTCCATGACTGCTTCGTTA
ATGGCTGCGATGGGTCGGTACTACTAGATGACACAGCCACATTCACCGGC
GAGAAGAATGCAGGACCAAACAGAAACTCTGCTAGGGGTTTCGAAGTGAT
TGACGCCATTAAAACTCGTCTGGAAGCAGCTTGCAACGCCACCGTTTCAT
GTGCCGACATCCTTGCTGTTGCAGCCCGAGACGGTGTCGCCTTGCTTGGA
GGACCGACTTGGACGGTACCGCTCGGCCGGCGAGATGCAAGAACGGCCAG
TCAGAGTGCAGCCAATAGCCAAATCCCTGGACCATCCTCCAGCCTGGCAA
CACTCATATCAATGTTTGCAGCCAAAGGCCTGACCGCCCAAGACATGACA
GTCCTCTCCGGCGGCCACGCCATCGGATTCGCTCGATG
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