FC931311

Overview
NameFC931311
Unique NameFC931311
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4548 contig Ccv1_Contig4548:40..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.135e-39
Identity = 86/189 (45.50%), Postives = 115/189 (60.85%), Query Frame = 1
Query:   61 VTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            V   L ++ L A  ++  L   FY+ +CP  + I +  +  A+N+ P   A +LR+FFHDCFV GCDGSVLLD      GEK+A PN  S RGF +ID  K  LE  C   VSC+DILA+ ARD +  L GP+W V  GRRD R ++ +  N  +P P  ++  LIS F +KGL  +D+ +LSGGH IG
Sbjct:    8 VVSCLFLVLLFAQANSQGLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNN-QGEKSAVPNL-SLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVSNINEVN--LPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIG 192          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.012e-39
Identity = 83/192 (43.23%), Postives = 117/192 (60.94%), Query Frame = 1
Query:   61 VTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDM-TVLSGGHAIGFA 633
            +T +  +   LA ++ AQL   FY+ SCP  + I    +           A+ LR+ FHDCFV GCD S+L+D       EK+ GPN  S RG+E+ID  K +LEAAC  TVSCADI+ +A RD VAL GGP ++VP GRRD   ++ +  N  +PGP+  ++  I +FAA+G+   DM T++ GGH++G A
Sbjct:    4 ITALFFLFCFLAPSALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNA-SVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPNDVN--LPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVA 192          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.976e-38
Identity = 76/152 (50.00%), Postives = 102/152 (67.11%), Query Frame = 1
Query:  184 AVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNAT-VSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            A+  + R  AS++RL FHDCFV+GCDG +LL+DTA FTGE+ A  N NS RGF VID  K   +  C  T VSCAD+LA+AARD        T+ + LGR+DARTA+ + AN+Q+P P  +L+   + FA KG   ++M VL+G H +GF+R
Sbjct:   83 AITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSR 234          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.976e-38
Identity = 81/185 (43.78%), Postives = 116/185 (62.70%), Query Frame = 1
Query:   73 LTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            L ++  +   + AQL   FY+ SCP  + I R+ + +     P   A++LR+ FHDCFV GCD S+L+D T     EK AGPN  S R F++ID IK +LEAAC +TVSCADI+ +A RD VAL GGP++++P GRRD R ++    +  +PGP+ S++  +S+F  KG+   D   L G H +G
Sbjct:   10 LLVLFFIFPIAFAQLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDST---NSEKTAGPN-GSVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNN--LDVTLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVG 188          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.511e-37
Identity = 86/189 (45.50%), Postives = 115/189 (60.85%), Query Frame = 1
Query:   88 LLACTSTAQLSPTF------YATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTA-TFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALL--GGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            LL   +  Q SP +      Y  +CP  + I +  M KA+ + P N A+++R+ FHDCFV GCD SVLLD T  + T EK A PN  S RGFE+IDAIK  LEAAC   VSCADI+A AARD    L  G  ++ +P GR D   ++ S +   +  P+S+L+ L S FA KG++ +D+ VLSG H +G
Sbjct:   20 LLLAAAACQASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVG 208          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.511e-37
Identity = 85/201 (42.29%), Postives = 116/201 (57.71%), Query Frame = 1
Query:   31 FMASSISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            F +    Y F++ +L +  LL  +S A+LS  FYA SCP  + I R+ +  A +  P     +LRL FHDCFV GCDGSVL+    T    + + P   S  GF VI+++K  LE  C  TVSCADIL +AARD V  LGGP   +P GRRD R +  +     I     ++  +I++F++KGL+  D+ VLSG H IG A
Sbjct:    5 FFSCKPKYTFLSSLLLL--LLLSSSVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGT----ERSDPGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAA 199          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 9.794e-37
Identity = 81/187 (43.32%), Postives = 115/187 (61.50%), Query Frame = 1
Query:   67 LILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            L L+++++    S A L   FY+ +CP  + I +  ++ A    P   A +LRL FHDCFV GCDGS+L+++ A    EKNA       RGFE+++A+K  LEAAC   VSC+DI+A+AARD ++L  GP + VP GRRD R ++ S A   +P  S S+  L + F  KGL A+D+ +LS  H IG
Sbjct:   10 LALSLVTVFFGISLANLEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGAI--SEKNAF-GHEGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLA-KDMPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIG 192          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.279e-36
Identity = 92/202 (45.54%), Postives = 116/202 (57.43%), Query Frame = 1
Query:   40 SSISYLFVTLILTIISLLACTSTAQLSPT----FYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            ++++  +V L   ++     T T    P     +Y ++C N + I R  +       P NA  ILR+ FHDCFV GCD SVLL   A    E+ A PN  S RGF VI+  KT+LE AC  TVSCADILA+AARD V L GGP W VPLGR D R +   A+N  +PGP+ S+A     FA K L  QD+ VL+ GH IG A
Sbjct:    5 TNLNPCYVLLPFFLVLATNATHTNNFLPRPRTGYYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLL---AGPNSERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRIS--LASNVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTA 200          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.861e-36
Identity = 87/190 (45.79%), Postives = 110/190 (57.89%), Query Frame = 1
Query:   67 LILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDM-TVLSGGHAIGFA 633
            L++  +S L           FY+T+CPN + I R  +       P+ A  +LR+  HDCFV GCDGSVLL        E+ AG N N   GFEVID  K +LEAAC   VSCADILA+AARD V+L  G +W VP GRRD R +  S  N+ +P PS SLA     F+A  L  +D+ T++ GGH IG A
Sbjct:    9 LVIVFLSCLIAVYGQGTRIGFYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGP---NSERTAGANVN-LHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVNN-LPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTA 193          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.349e-36
Identity = 84/194 (43.30%), Postives = 116/194 (59.79%), Query Frame = 1
Query:   67 LILTIISLLACT--STAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSAR-GFEVIDAIKTRLEAA--CNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            L+L I+SL      S+AQL   FYA +CPN ++I R+ + K + +      + LRL+FHDCFVNGCD SV++  T T   EK+   N + A  GF+ +   K  ++A   C   VSCADIL +A RD V L GGP + V LGRRD  ++S S+   ++P P+  L  L ++FA  GL+  DM  LSG H +GFA
Sbjct:    9 LLLLILSLFLAINLSSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFA 202          
The following BLAST results are available for this feature:
BLAST of FC931311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER27_ARATH6.135e-3945.50Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER44_ARATH8.012e-3943.23Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PERN_IPOBA3.976e-3850.00Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER57_ARATH3.976e-3843.78Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER2_MAIZE1.511e-3745.50Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER18_ARATH1.511e-3742.29Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER43_ARATH9.794e-3743.32Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER70_ARATH1.279e-3645.54Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER62_ARATH4.861e-3645.79Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER51_ARATH6.349e-3643.30Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34103G06EF PostHarvP1 Citrus clementina cDNA clone C34103G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931311 ID=FC931311; Name=FC931311; organism=Citrus clementina; type=EST; length=638bp
ATCTGCTTTAACTTTCCATTTTTGGATTGGTTCATGGCATCTTCAATTTC
TTATTTGTTTGTTACACTTATACTCACAATTATATCCCTTCTAGCTTGCA
CCTCCACTGCGCAACTTTCTCCAACCTTTTATGCAACATCTTGCCCCAAT
TTTCAAAGAATCGCGAGGGATGAAATGACCAAAGCTGTTAATAGACAACC
GCGTAATGCTGCCTCTATTCTTCGCCTCTTCTTCCATGACTGCTTCGTTA
ATGGCTGCGATGGGTCGGTACTACTAGATGACACAGCCACATTCACCGGC
GAGAAGAATGCAGGACCAAACAGAAACTCTGCTAGGGGTTTCGAAGTGAT
TGACGCCATTAAAACTCGTCTGGAAGCAGCTTGCAACGCCACCGTTTCAT
GTGCCGACATCCTTGCTGTTGCAGCCCGAGACGGTGTCGCCTTGCTTGGA
GGACCGACTTGGACGGTACCGCTCGGCCGGCGAGATGCAAGAACGGCCAG
TCAGAGTGCAGCCAATAGCCAAATCCCTGGACCATCCTCCAGCCTGGCAA
CACTCATATCAATGTTTGCAGCCAAAGGCCTGACCGCCCAAGACATGACA
GTCCTCTCCGGCGGCCACGCCATCGGATTCGCTCGATG
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