FC931311

Overview
NameFC931311
Unique NameFC931311
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4548 contig Ccv1_Contig4548:40..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 4.550e-34
Identity = 69/167 (41.32%), Postives = 101/167 (60.48%), Query Frame = 1
Query:  127 FYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            +Y  SCP  ++I    +    N  P  A  I+RL FHDCF+ GCD SVLLD     T EK+A PN  S +GF+VIDA+K+ LE  C   VSCAD+L +AAR+ V + GGP + +  GR+D+  A +  A  ++P P ++L+ ++  F+ +G   ++   L G H+IG
Sbjct:   72 YYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNL-SLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIG 237          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.729e-33
Identity = 75/171 (43.86%), Postives = 97/171 (56.73%), Query Frame = 1
Query:  124 TFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFAR 636
            TFY  SCP+   I R  + +A+    R  A ++RL FHDCFVNGCDGSVLL+D      E  A P   +  GF +++ IK  +E AC   VSCADILA+A+   V L GGP W V LGRRD+R A+   A   +P P  ++  L   F    L + D+  LSG H  G +R
Sbjct:    1 TFYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSEL-AAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSR 170          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.949e-33
Identity = 83/176 (47.16%), Postives = 106/176 (60.23%), Query Frame = 1
Query:  103 STAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLS-GGHAIG 627
            S AQL   FY+ +CP+ + I RD + +AV   P  AA +LRL FHDCFV GCDGS+L+        E+ A  N   A GF+VID  K+ LE  C   VSCADI+A+AARD +A   GP + VP GRRD   A+   A + +P    S+ TL S F  KGL+ QD+ +LS G H IG
Sbjct:   20 SAAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGN-DDERFAAGNAGVA-GFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHAKN-LPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIG 192          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.030e-33
Identity = 76/169 (44.97%), Postives = 101/169 (59.76%), Query Frame = 1
Query:  127 FYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            FY+++CP  + I +  +       P  A  ILR+ FHDCFV GCDGS+L++ +     E+ A PNRN  +GF+VI+  KT++EA C   VSCADILA+AARD V    G TW+VP GRRD R  S++A    +P    S+      F  KGL  QD+  L+G H IG A
Sbjct:   36 FYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS---DAERTAIPNRN-LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGR-VSRAADAGDLPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTA 199          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 6.570e-33
Identity = 85/203 (41.87%), Postives = 113/203 (55.67%), Query Frame = 1
Query:   34 MASSISYLFVTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSAR-GFEVIDAIKTRLEAA--CNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            M +  S+  V L+L   S    +  AQL   FY  SCPN + I R+ + +   +    A + LRLFFHDCFV GCD S+LL   +    EK+   +++ A  GF+ +   K  L+    C   VSCADILA+A RD V L GGP + V LGRRD R ++ ++    +P PS  L  L +MFA  GL+  DM  LSG H IGFA
Sbjct:    1 MKNQSSFSIVALLLIFFS---SSVFAQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPS----EKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFA 196          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.562e-32
Identity = 77/210 (36.67%), Postives = 118/210 (56.19%), Query Frame = 1
Query:   34 MASSISYLFVTLILTIISLLACTSTA-------QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDT--ATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            ++S   +LF+T  + I  +   TS         +LS  +Y+  CP  + +     ++     P +A + +RLFFHDCFV GCDGS+L++    +    E+ A  N+     GF+ I   K  +E+ C + VSC+DILA+AARD + L GGP + V  GR D + ++       IP  +S++  LI +FA+KGLT +++ VLSG H IGFA
Sbjct:    8 LSSIFFFLFLTSTILISPVQPTTSKPPAPRPHRELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFA 217          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 7.264e-32
Identity = 69/192 (35.94%), Postives = 106/192 (55.21%), Query Frame = 1
Query:   61 VTLILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            +   L +++ +     A L   +Y  +CP+F +I R+ +T    +QP  AA  LRLFFHDCF+ GCD SVL+   +    E++   N +     F+++  IKT LE +C   VSCADILA A RD V ++GGP + V LGR+D   +        +P  + ++  +  +F   G + ++M  LSG H IGF+
Sbjct:   15 ILFCLAVVAPIISADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFS 206          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.264e-32
Identity = 75/187 (40.11%), Postives = 110/187 (58.82%), Query Frame = 1
Query:   79 IISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAA--CNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            ++ LL+   +AQL   FY  SCPN + I R+ + +   +    A + LRLFFHDCFV GCD S+++   A+ +   +      +  GF+ +   K  +++   C   VSCADILA+A R+ V L GGP++ V LGRRD R +++++  SQ+P P  +L  L  MF+  GL+  DM  LSG H IGFA
Sbjct:   15 LLLLLSSCVSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMI---ASPSERDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFA 198          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.618e-31
Identity = 72/190 (37.89%), Postives = 104/190 (54.74%), Query Frame = 1
Query:   67 LILTIISLLACTSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFA 633
            L L I+    C   A LS  +Y  +CP F+      +T      P  A   LRLFFHDC V+GCD S+L+  T   T E++A  NR+     F+VI  IKT +E  C   VSC+DIL  A R  ++++GGP   V  GR+D+  +  +    ++  P+ ++  +IS+F + GLT Q+M  L G H IGF+
Sbjct:    6 LCLFILVSSPCLLQANLSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFS 195          
BLAST of FC931311 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.789e-30
Identity = 67/177 (37.85%), Postives = 104/177 (58.76%), Query Frame = 1
Query:  100 TSTAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDA-RTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIG 627
            T+   LS ++Y  +CP  + I R  ++      P + A++LRL FHDC V GCD S+LL+        +         R  +++ +IKT LE  C   VSC+D++ +AARD VAL GGP  +VPLGR+D+  T S+  A+S++P  ++ + T +S+FA KG+T ++   + G H IG
Sbjct:   33 TNNEGLSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIG 209          
The following BLAST results are available for this feature:
BLAST of FC931311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER48_ARATH4.550e-3441.32Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER2_CUCSA1.729e-3343.86Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER13_ARATH2.949e-3347.16Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PERN1_TOBAC5.030e-3344.97Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER16_ARATH6.570e-3341.87Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER19_ARATH5.562e-3236.67Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER65_ARATH7.264e-3235.94Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER45_ARATH7.264e-3240.11Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER6_ARATH1.618e-3137.89Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER29_ARATH1.789e-3037.85Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34103G06EF PostHarvP1 Citrus clementina cDNA clone C34103G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931311 ID=FC931311; Name=FC931311; organism=Citrus clementina; type=EST; length=638bp
ATCTGCTTTAACTTTCCATTTTTGGATTGGTTCATGGCATCTTCAATTTC
TTATTTGTTTGTTACACTTATACTCACAATTATATCCCTTCTAGCTTGCA
CCTCCACTGCGCAACTTTCTCCAACCTTTTATGCAACATCTTGCCCCAAT
TTTCAAAGAATCGCGAGGGATGAAATGACCAAAGCTGTTAATAGACAACC
GCGTAATGCTGCCTCTATTCTTCGCCTCTTCTTCCATGACTGCTTCGTTA
ATGGCTGCGATGGGTCGGTACTACTAGATGACACAGCCACATTCACCGGC
GAGAAGAATGCAGGACCAAACAGAAACTCTGCTAGGGGTTTCGAAGTGAT
TGACGCCATTAAAACTCGTCTGGAAGCAGCTTGCAACGCCACCGTTTCAT
GTGCCGACATCCTTGCTGTTGCAGCCCGAGACGGTGTCGCCTTGCTTGGA
GGACCGACTTGGACGGTACCGCTCGGCCGGCGAGATGCAAGAACGGCCAG
TCAGAGTGCAGCCAATAGCCAAATCCCTGGACCATCCTCCAGCCTGGCAA
CACTCATATCAATGTTTGCAGCCAAAGGCCTGACCGCCCAAGACATGACA
GTCCTCTCCGGCGGCCACGCCATCGGATTCGCTCGATG
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