FC931320

Overview
NameFC931320
Unique NameFC931320
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11747 contig Ccv1_Contig11747:528..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: METZ_PSEAE (O-succinylhomoserine sulfhydrylase OS=Pseudomonas aeruginosa GN=metZ PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.361e-43
Identity = 89/233 (38.20%), Postives = 141/233 (60.52%), Query Frame = 2
Query:    5 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 703
            + GI       +D+   EAA   N   LFF ESP+NP    VD+  ++++ H KGA++ +D  F TP  Q+ L LGAD+V+HSATK+I G    + G ++G  + + ++       G  L+P  A+L ++G++TL +R+Q  +++AL +A+ LE  P ++RV+Y GL SHP+H +A +Q +GFG VVSF+V G   A  +FIDA ++  I  + G  ++ +  PA  S+  LS
Sbjct:  135 RFGIQVDYPPLSDLAAWEAACKPNT-KLFFVESPSNPLAELVDIAALAEIAHAKGALLAVDNCFCTPALQQPLKLGADVVIHSATKYIDGQGRGMGGVVAGRGEQMKEVVGFLRTAGPTLSPFNAWLFLKGLETLRIRMQAHSASALALAEWLERQPGIERVYYAGLPSHPQHELARRQQSGFGAVVSFDVKGGRDAAWRFIDATRMVSITTNLGDTKTTIAHPATTSHGRLS 366          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: CGL_PIG (Cystathionine gamma-lyase OS=Sus scrofa GN=CTH PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.152e-42
Identity = 90/231 (38.96%), Postives = 148/231 (64.07%), Query Frame = 2
Query:    5 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-DGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 691
            + G+  + +D +  + LEAA+      L + E+PTNP L+ +D++  + + HK G I+ + D TF +   Q+ L+LGAD+ ++SATK++ GH+DV+ G +S  SE L +++R L + LG   +P   YL  RG+KTL +R+++     + +A+ LE+HP V++V YPGL SHP+H +A +Q TG  G++SF + G L     F+ +LK+  +A S GG ES+ + PAIM++
Sbjct:  127 EFGLKISFVDCSKSKLLEAAITPET-KLVWIETPTNPILKMIDIEACAQIVHKHGDIILVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLVSLNSETLHSRLRFLQNSLGAVPSPIDCYLCNRGLKTLQVRMEKHFENGMAVAQFLESHPLVEKVIYPGLPSHPQHELAKRQCTGCPGMISFYIKGSLHHAETFLKSLKLFTLAESLGGYESLAELPAIMTH 356          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: CGL_MACFA (Cystathionine gamma-lyase OS=Macaca fascicularis GN=CTH PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.152e-42
Identity = 90/231 (38.96%), Postives = 150/231 (64.94%), Query Frame = 2
Query:    5 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-DGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 691
            + G+  + +D + ++ LEAA+      L + E+PTNP L+ +D++  + + HK+G I+ + D TF +P  Q+ L+LGAD+ + SATK++ GH+DV+ G +S   E+L  ++R L + LG   +P   YL  RG+KTLH+R+++     + +A+ LE++P V++V YPGL SHP+H +A +Q TG  G+++F + G L     F+  LK+  +A S GG ES+V+ PAIM++
Sbjct:  127 EFGLKISFVDCSKIKLLEAAITPET-KLVWIETPTNPVLKMIDIEACAHIVHKRGDIILVVDNTFMSPYFQRPLALGADICMCSATKYMNGHSDVVMGLVSVNCERLHNRLRFLQNSLGAVPSPLDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPGVEKVIYPGLPSHPQHELAKRQCTGCTGMITFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLVELPAIMTH 356          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: METB_MYCLE (Cystathionine gamma-synthase OS=Mycobacterium leprae GN=metB PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.965e-42
Identity = 91/224 (40.62%), Postives = 134/224 (59.82%), Query Frame = 2
Query:   23 TVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGC-ISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 691
            T +  +D++ + AA+ +    L + E+PTNP L   D+  + +L  K    V +D TFA+P  Q+ L LGAD+VLHS TK+IGGH+DV+ G  ++  E+L      L +  G   +P  AYL +RG+KTL LR+Q+ N  A+ +A+ L  HP V  V YPGL SHP H +A +QM GFGG+VS  +     A        K+  +A S GG ES+++QP+ M++
Sbjct:  130 TPVPLSDLDAVRAAITSRT-RLIWVETPTNPLLSIADITSIGELGKKHSVKVLVDNTFASPALQQPLMLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQAFGFLQNGAGAVPSPFDAYLTMRGLKTLVLRMQRHNENAITVAEFLAGHPSVSAVLYPGLPSHPGHEVAARQMRGFGGMVSLRMRAGRLAAQDLCARTKVFTLAESLGGVESLIEQPSAMTH 352          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: METC_BACSU (Cystathionine beta-lyase metC OS=Bacillus subtilis GN=metC PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.377e-42
Identity = 90/230 (39.13%), Postives = 134/230 (58.26%), Query Frame = 2
Query:    5 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 691
            + GI  T +D  D   +  ++  N   + + E+P+NP L   D+K V  L  + G +  +D TF TP  Q+ L LG D+VLHSATKF+ GH+DVL+G  +   E+L  Q+  L +  G  L     +L++RG+KTL +R+++ + TA R+A+  + HP VKRV+YPGL  HP       Q TG G V+SFE++    A  K ++ + +P  A S G  ESI+  PA MS+
Sbjct:  116 RFGIEHTFVDMTDRNEVARSIKPNT-KVIYMETPSNPTLGITDIKAVVQLAKENGCLTFLDNTFMTPALQRPLDLGVDIVLHSATKFLSGHSDVLSGLAAVKDEELGKQLYKLQNAFGAVLGVQDCWLVLRGLKTLQVRLEKASQTAQRLAEFFQKHPAVKRVYYPGLADHPGAETHKSQSTGAGAVLSFELESK-EAVKKLVENVSLPVFAVSLGAVESILSYPATMSH 343          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: METC_ARATH (Cystathionine beta-lyase, chloroplastic OS=Arabidopsis thaliana GN=At3g57050 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.705e-41
Identity = 85/231 (36.80%), Postives = 139/231 (60.17%), Query Frame = 2
Query:    2 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 691
            P+ G+    ++   ++ + AA+      L + ESPTNP  +  D++ +S++ H +GA+V +D +  +P+  + L LGAD+V+HSATKFI GH+DV+AG ++   EKL  ++  L +  G  L P   +L +RG+KT+ LR+++Q   A ++A  L +HP+VK+V+Y GL  HP HH+   Q  G G V SF + G +  +   ++  K   IA SFG  +S++  P  MS+
Sbjct:  193 PRSGVVVKRVNTTKLDEVAAAIGPQT-KLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSF-ITGSVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSH 421          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: CGL2_CAEEL (Putative cystathionine gamma-lyase 2 OS=Caenorhabditis elegans GN=cth-2 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.839e-41
Identity = 87/233 (37.34%), Postives = 142/233 (60.94%), Query Frame = 2
Query:    2 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA--IVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGC-ISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 691
            P  G+    +D  D++ LE A+  N   ++F ESP+NP L+ VD+  V     K     +V +D TF +P  Q+ +SLGAD+V+HS TK+I GH+DV+ G  I+ +++    +  +   +G   +P   +L+ RG+KTLH+R++     AL +AK LEA+ +++ V YP L SHP+H +  +Q  G  G++SF + G+L  +  F+ ALK+  +A S GG ES+ + P+IM++
Sbjct:  116 PNHGLEVDSVDLTDVQNLEKAIKPNTKMVWF-ESPSNPLLKVVDIAAVVQTAKKANPEIVVVVDNTFMSPYFQRPISLGADVVVHSITKYINGHSDVVMGAVITDNDEFQQHLFFMQLAVGAVPSPFDCFLVNRGLKTLHIRMRAHYENALAVAKYLEANDRIESVLYPALPSHPQHEVHEKQTKGMSGMISFYLKGELQESRAFLSALKVFTLAESLGGYESLAELPSIMTH 347          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: METB_MYCTU (Cystathionine gamma-synthase OS=Mycobacterium tuberculosis GN=metB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.078e-40
Identity = 90/224 (40.18%), Postives = 133/224 (59.38%), Query Frame = 2
Query:   23 TVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGC-ISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 691
            T +  AD++ + AA+      L + E+PTNP L   D+  +++L   + A V +D TFA+P  Q+ L LGAD+VLHS TK+IGGH+DV+ G  ++  E+L  +   L +  G    P  AYL +RG+KTL LR+Q+ +  A  +A+ L  HP V  V YPGL SHP H IA +QM GFGG+VS  +     A        ++  +A S GG ES+++ P+ M++
Sbjct:  130 TPVRLADLDAVGAAITPRT-RLIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQNGAGAVPGPFDAYLTMRGLKTLVLRMQRHSENACAVAEFLADHPSVSSVLYPGLPSHPGHEIAARQMRGFGGMVSVRMRAGRRAAQDLCAKTRVFILAESLGGVESLIEHPSAMTH 352          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: METB_MYCBO (Cystathionine gamma-synthase OS=Mycobacterium bovis GN=metB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.078e-40
Identity = 90/224 (40.18%), Postives = 133/224 (59.38%), Query Frame = 2
Query:   23 TVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGC-ISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 691
            T +  AD++ + AA+      L + E+PTNP L   D+  +++L   + A V +D TFA+P  Q+ L LGAD+VLHS TK+IGGH+DV+ G  ++  E+L  +   L +  G    P  AYL +RG+KTL LR+Q+ +  A  +A+ L  HP V  V YPGL SHP H IA +QM GFGG+VS  +     A        ++  +A S GG ES+++ P+ M++
Sbjct:  130 TPVRLADLDAVGAAITPRT-RLIWVETPTNPLLSIADITAIAELGTDRSAKVLVDNTFASPALQQPLRLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQNGAGAVPGPFDAYLTMRGLKTLVLRMQRHSENACAVAEFLADHPSVSSVLYPGLPSHPGHEIAARQMRGFGGMVSVRMRAGRRAAQDLCAKTRVFILAESLGGVESLIEHPSAMTH 352          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: CGL_BOVIN (Cystathionine gamma-lyase OS=Bos taurus GN=CTH PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.408e-40
Identity = 89/231 (38.53%), Postives = 146/231 (63.20%), Query Frame = 2
Query:    5 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-DGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 691
            + G+  + +D +  + LEAA+      L + E+PTNP L+ +D++  +   HK G I+ + D TF +   Q+ LSLGAD+ ++SATK++ G++DV+ G +S  SE L  ++R L + LG   +P   YL  RG+KTL +R+++     + +A+ LE++P+V++V YPGL SHP+H +A +Q TG  G+V+F + G L     F+  LK+  +A S GG ES+ + PAIM++
Sbjct:  127 EFGLKISFVDCSKPKLLEAAITPET-KLVWIETPTNPSLKMIDIEACAHTVHKHGDIILVVDNTFMSAYFQRPLSLGADICMYSATKYMNGYSDVVMGLVSLNSESLHDRLRFLQNSLGAVPSPIDCYLCNRGLKTLQVRMEKHFENGMAVAQFLESNPQVEKVIYPGLPSHPQHELAKRQCTGCPGMVTFYIKGSLQHAETFLQNLKLFTLAESLGGYESLAELPAIMTH 356          
The following BLAST results are available for this feature:
BLAST of FC931320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
METZ_PSEAE1.361e-4338.20O-succinylhomoserine sulfhydrylase OS=Pseudomonas ... [more]
CGL_PIG1.152e-4238.96Cystathionine gamma-lyase OS=Sus scrofa GN=CTH PE=... [more]
CGL_MACFA1.152e-4238.96Cystathionine gamma-lyase OS=Macaca fascicularis G... [more]
METB_MYCLE1.965e-4240.63Cystathionine gamma-synthase OS=Mycobacterium lepr... [more]
METC_BACSU4.377e-4239.13Cystathionine beta-lyase metC OS=Bacillus subtilis... [more]
METC_ARATH3.705e-4136.80Cystathionine beta-lyase, chloroplastic OS=Arabido... [more]
CGL2_CAEEL4.839e-4137.34Putative cystathionine gamma-lyase 2 OS=Caenorhabd... [more]
METB_MYCTU1.078e-4040.18Cystathionine gamma-synthase OS=Mycobacterium tube... [more]
METB_MYCBO1.078e-4040.18Cystathionine gamma-synthase OS=Mycobacterium bovi... [more]
CGL_BOVIN1.408e-4038.53Cystathionine gamma-lyase OS=Bos taurus GN=CTH PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34103H03EF PostHarvP1 Citrus clementina cDNA clone C34103H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931320 ID=FC931320; Name=FC931320; organism=Citrus clementina; type=EST; length=725bp
GCCCAAAATGGGAATCACGGCTACGGTGATTGACCCAGCTGATATGGAAG
GTTTGGAGGCAGCACTCAACAATAACAATGTCTCACTATTCTTCACCGAG
TCTCCAACCAATCCATTCCTGAGATGTGTGGATGTCAAACTGGTTTCAGA
TCTTTGCCATAAGAAAGGAGCAATAGTTTGCATAGATGGAACCTTTGCCA
CACCTCTCAATCAGAAGGCCCTCAGCCTTGGTGCTGATCTTGTACTGCAC
TCTGCAACAAAATTCATTGGTGGCCACAATGATGTCCTTGCTGGGTGCAT
TAGTGGTTCAGAGAAGTTAGTTACACAAATTCGTAATTTGCATCATGTTT
TGGGTGGTGCTCTCAACCCGAATGCCGCGTATTTGATCATTCGAGGCATG
AAGACATTGCATCTTCGTGTACAGCAACAAAATTCAACTGCGTTGAGGAT
GGCCAAGATTTTAGAGGCACATCCAAAGGTGAAGCGCGTTCACTATCCAG
GCTTGAAGAGTCATCCTGAGCATCACATTGCCACACAGCAAATGACTGGT
TTTGGTGGGGTAGTTAGTTTTGAGGTTGATGGAGACCTAACGGCCACCAT
AAAATTTATTGATGCCTTGAAAATCCCATATATTGCTCCATCCTTCGGTG
GCTGTGAGAGCATTGTTGATCAGCCAGCTATAATGTCGTATTGGGACCTT
AGCCATCGGAGAAGCTCAGTATGGG
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