FC931320

Overview
NameFC931320
Unique NameFC931320
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11747 contig Ccv1_Contig11747:528..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: CYSD_SCHPO (O-acetylhomoserine (thiol)-lyase OS=Schizosaccharomyces pombe GN=SPBC428.11 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.045e-27
Identity = 80/270 (29.63%), Postives = 130/270 (48.15%), Query Frame = 2
Query:    2 PKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATP-LNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKL------------------------VTQIRNLHHV----------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM-TGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 703
            P++GIT   ++  D   L A ++ N  +++  ES  NP     D + ++++ H  G  + +D TF       + +  GAD+V HSATK+IGGH   + G I  S K                              NL +           +GG  NP   +L+++G++TL LR+++    A  +AK LE HPKV  V YPGL+SH  H +A + +  G+G V+SF   G    + K ++ALK+     + G  +++V  PA  ++  L+
Sbjct:  124 PRLGITTKFVNGDDPNDLAAQIDENTKAVY-VESIGNPMYNVPDFERIAEVAHAAGVPLMVDNTFGGGGYLVRPIDHGADIVTHSATKWIGGHGTTIGGVIVDSGKFDWKKNSKRFPEFNEPHPGYHGMVFTETFGNLAYAFACRTQTLRDVGGNANPFGVFLLLQGLETLSLRMERHVQNAFALAKYLEKHPKVNWVSYPGLESHVSHKLAKKYLKNGYGAVLSFGAKGGPDQSRKVVNALKLASQLANVGDAKTLVIAPAYTTHLQLT 392          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: METC_HAEIN (Cystathionine beta-lyase OS=Haemophilus influenzae GN=metC PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.862e-25
Identity = 71/245 (28.98%), Postives = 133/245 (54.29%), Query Frame = 2
Query:    5 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTA--TIKFIDALKIPYIAPSFGGCESIV--DQPAIMSYWDLSHRRSSV 721
            KM I  T  DP   E + A L   N  + F E+P++  +   D+  +     K     ++ ID T++  +  KAL    D+ + + TK++ GH+D++ G    + +   Q+R   +++G  ++ ++AY   RG++TL +R++Q   +++++AK L   P+VK V++P L S P H    +  +G  G+ SFE+   LT+    KF+D  ++  +A S+GG ES++  +QP      +++H R ++
Sbjct:  125 KMQIDITYYDPLIGEDI-ATLIQPNTKVLFLEAPSSITMEIPDIPTIVKAARKVNPNIVIMIDNTWSAGVLFKALEHDIDISIQAGTKYLVGHSDIMIGTAVANARTWDQLREHSYLMGQMVDADSAYTTARGIRTLGVRLKQHQESSIKVAKWLSEQPEVKTVYHPALPSCPGHEFFLRDFSGSSGLFSFELTQRLTSEQVSKFMDHFQLFAMAYSWGGFESLILCNQPE-----EIAHIRPNI 363          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: CBL_SCHPO (Cystathionine beta-lyase OS=Schizosaccharomyces pombe GN=str3 PE=2 SV=4)

HSP 1 Score: 113.235 bits (282), Expect = 1.415e-24
Identity = 68/230 (29.57%), Postives = 121/230 (52.61%), Query Frame = 2
Query:   11 GITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSY 691
            G     +D +D+   EAAL  +  +L   ESPTNP +   D++ +  +   K   A++ +D T  +P+    L  G D+V  SATK++ GH+D++ G I + S+++   +    + +G A+ P   +L++RG+KT+ LRV++    A+ +AK L++  K  +V++PGL    +            G V     GD+  +   ++  K+  I+ SFG   S++  PA MS+
Sbjct:  118 GFKVDNVDTSDLAAFEAALRPDT-NLVLIESPTNPRISICDIRAIVKITRSKAKDALLVMDNTMLSPVLCNPLDFGYDIVYESATKYLSGHHDLMGGVIATKSDEIAKSVFFNINAMGAAMAPFECFLLLRGIKTMGLRVERAQQNAIEIAKFLKS--KGLQVNFPGLDPDAKSTAIFYSFARGPGAVMSVFTGDVEVSKTIVNTTKLFEISVSFGAVNSLISMPAYMSH 344          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: METC_ECOLI (Cystathionine beta-lyase metC OS=Escherichia coli (strain K12) GN=metC PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.324e-22
Identity = 66/225 (29.33%), Postives = 118/225 (52.44%), Query Frame = 2
Query:    5 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLT--ATIKFIDALKIPYIAPSFGGCESIV 667
            K+G+T +  DP     +   L  N   + F ESP +  +   DV  +          AI+ ID T+A  +  KAL  G D+ + +ATK++ GH+D + G    + +   Q+R   +++G  ++ + AY+  RG++TL +R++Q + ++L++A+ L  HP+V RV++P L     H    +  TG  G+ SF +   L       ++D   +  +A S+GG ES++
Sbjct:  124 KLGVTTSWFDPLIGADIVKHLQPNT-KIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLI 347          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: MET17_KLULA (Protein MET17 OS=Kluyveromyces lactis GN=MET17 PE=3 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 2.950e-22
Identity = 83/279 (29.75%), Postives = 127/279 (45.52%), Query Frame = 2
Query:    5 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKL---------------------------------VTQIRN-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM-TGFGGVVSF----------EVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLS 703
            ++GI A  +D    E  E   +    +L+  ES  NP     D + +  + HK G  V +D TF A     + +  GAD+V HSATK+IGGH   + G I  S K                                  +  +R  L   LG  L+P A +L+++G++TL LR ++  S AL++A+ LE+ P V  V YPGL SH  H  A + +  GFGGV+SF          E D    +  + +D LK+     + G  +++V  P   ++  L+
Sbjct:  123 RLGIEARFVDGDKPEDFEKLFDEKTKALYL-ESIGNPKYNVPDFEKIVAVAHKHGIPVVVDNTFGAGGFFCQPIKYGADIVTHSATKWIGGHGVTVGGVIIDSGKFPWKDYPEKFPQFSQPSEGYHGLIFNDAFGPAAFIGHVRTELLRDLGPVLSPFAGFLLLQGLETLSLRGERHGSNALKLAQYLESSPYVSWVSYPGLPSHSHHENAKKYLENGFGGVLSFGVKDLPNASEESDPFKASGAQVVDNLKLASNLANVGDSKTLVIAPYFTTHQQLT 400          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: MET17_YEAST (Protein MET17 OS=Saccharomyces cerevisiae GN=MET17 PE=1 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22
Identity = 80/281 (28.47%), Postives = 128/281 (45.55%), Query Frame = 2
Query:    5 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKL---------------------------------VTQIRN-LHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT-GFGGVVSF----------EVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSHR 709
            + GI A  ++  + E  E   +    +++  E+  NP     D + +  + HK G  V +D TF A     + +  GAD+V HSATK+IGGH   + G I  S K                                  +  +R  L   LG  +NP A++L+++G++TL LR ++    AL++AK LE  P V  V YPGL SH  H  A + ++ GFGGV+SF          E D    +  + +D LK+     + G  +++V  P   ++  L+ +
Sbjct:  124 RFGIEARFVEGDNPEEFEKVFDERTKAVYL-ETIGNPKYNVPDFEKIVAIAHKHGIPVVVDNTFGAGGYFCQPIKYGADIVTHSATKWIGGHGTTIGGIIVDSGKFPWKDYPEKFPQFSQPAEGYHGTIYNEAYGNLAYIVHVRTELLRDLGPLMNPFASFLLLQGVETLSLRAERHGENALKLAKWLEQSPYVSWVSYPGLASHSHHENAKKYLSNGFGGVLSFGVKDLPNADKETDPFKLSGAQVVDNLKLASNLANVGDAKTLVIAPYFTTHKQLNDK 403          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: METC_SALTY (Cystathionine beta-lyase OS=Salmonella typhimurium GN=metC PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.031e-22
Identity = 63/225 (28.00%), Postives = 117/225 (52.00%), Query Frame = 2
Query:    5 KMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTAT--IKFIDALKIPYIAPSFGGCESIV 667
            K+G+T +  DP     +   +  N   + F ESP +  +   D+  +     +    A++ ID T+A  +  KAL    D+ + + TK++ GH+D + G    + +   Q+R   +++G  L+ + AY+  RG++TL +R++Q   ++L++A  L  HP+V RV++P L     H    +  TG  G+ SF ++  LT      ++D   +  +A S+GG ES++
Sbjct:  124 KLGVTTSWFDPLIGADITQHIQPNT-KVVFLESPGSITMEVHDIPSIVSAVRRVAPEAVIMIDNTWAAGVLFKALEFDIDISIQAGTKYLIGHSDAMVGTAVANARCWEQLRENAYLMGQMLDADTAYMTSRGLRTLGVRLRQHQESSLKIAAWLANHPQVARVNHPALPGSKGHAFWKRDFTGSSGLFSFVLNKKLTEAELSAYLDNFSLFSMAYSWGGYESLI 347          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: METC_BORAV (Cystathionine beta-lyase OS=Bordetella avium GN=metC PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 5.563e-21
Identity = 59/223 (26.46%), Postives = 121/223 (54.26%), Query Frame = 2
Query:    5 KMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIV 667
            ++GI  T  D  AD+    A+L      L F E+P +     +D+  ++    +   I+  D T+ +    + L+LGA + + + TK++GGH+D++ G + +  E +  ++    + LG +++ + A+L +RG++T+ +R+ Q    AL + + L+  P+V R+++P   + P H +  +  +G  G+++ ++     A   F++AL +  I  S+GG ES+V
Sbjct:  132 RLGIDVTFFDAKADL----ASLVRPTTRLIFAEAPGSLLFEMLDMPALARFAKQHDLILATDNTWGSGYIYRPLTLGAQVSVIAGTKYVGGHSDLMLGAVVTNDEAIAKRLNRTQYALGYSVSADDAWLALRGVRTMPVRMAQHARHALEVCEFLQNRPEVVRLYHPAWPADPGHALWQRDCSGSNGMLAVQLGLSPQAARDFVNALTLFGIGFSWGGFESLV 350          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: YHR2_YEAST (Uncharacterized trans-sulfuration enzyme YHR112C OS=Saccharomyces cerevisiae GN=YHR112C PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21
Identity = 71/240 (29.58%), Postives = 130/240 (54.17%), Query Frame = 2
Query:   29 IDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVT-QIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK-----VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYI--APSFGGCESIVDQPAIMS-YWDLSHRRSSV 721
            I+   +E +E   +  ++     ESP NP+    D++ ++   H KGA++ +D TFA+P  Q A + GAD+VL+SATK+ GGH+D+L+G +   E+  + Q+++    LG  +    +++++R ++T  +R+ +Q+  A ++ + L  H       +K +++  L++  E  +  Q + G+G V  F +        K +  LK+ Y   A S GG ES+V+  A+   Y D +  R SV
Sbjct:  123 IEQHPLEDIEKCASEGDI--VHLESPVNPYGTSSDIESLARRAHAKGALLIVDSTFASPPLQYAWNFGADIVLYSATKYFGGHSDLLSGVLVVKEEATSRQLKDDRIYLGTNVANLESFMLLRSLRTYEMRITKQSENATKLVRFLSDHQSEFDKVLKTIYHSSLQT--EEFVKKQLVGGYGPV--FAITLYTKEQCKQL-PLKLKYFHHATSLGGIESLVEWRAMTDPYIDQTLIRVSV 355          
BLAST of FC931320 vs. ExPASy Swiss-Prot
Match: STR3_YEAST (Cystathionine beta-lyase OS=Saccharomyces cerevisiae GN=STR3 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20
Identity = 69/237 (29.11%), Postives = 119/237 (50.21%), Query Frame = 2
Query:   29 IDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDL--CHKKGAIVCIDGTFATPLNQKALSL--GADLVLHSATKFIGGHNDVLAGCI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE--------AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPY--IAPSFGGCESIVDQPAIMSY 691
            +D +D E  +    + + V     ESPTNP  + VD+  +     C      V +D T  + LN   L L  G D+V  SATK++ GH+D++ G I S + ++ +++  + +  G  L+P  ++L++RG+KTL +R+ QQ   A+ +A  LE           K  +  + GL+S+P+  +      G G V+SFE  G    + + + + K+    +  SFG   S++  P  MS+
Sbjct:  131 VDTSDFEKFKTVFQSLDKVDCVLLESPTNPLCKVVDIPRILRFVKCISPDTTVVVDNTMMSGLNCNPLQLNPGCDVVYESATKYLNGHHDLMGGVIISKTPEIASKLYFVINSTGAGLSPMDSWLLVRGLKTLGVRLYQQQRNAMILAHWLENSCGFKPTRTNKATKTRFVGLRSNPDFKLHKSFNNGPGAVLSFET-GSFEHSKRLVSSKKLSIWAVTVSFGCVNSLLSMPCKMSH 366          
The following BLAST results are available for this feature:
BLAST of FC931320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
CYSD_SCHPO3.045e-2729.63O-acetylhomoserine (thiol)-lyase OS=Schizosaccharo... [more]
METC_HAEIN4.862e-2528.98Cystathionine beta-lyase OS=Haemophilus influenzae... [more]
CBL_SCHPO1.415e-2429.57Cystathionine beta-lyase OS=Schizosaccharomyces po... [more]
METC_ECOLI1.324e-2229.33Cystathionine beta-lyase metC OS=Escherichia coli ... [more]
MET17_KLULA2.950e-2229.75Protein MET17 OS=Kluyveromyces lactis GN=MET17 PE=... [more]
MET17_YEAST3.852e-2228.47Protein MET17 OS=Saccharomyces cerevisiae GN=MET17... [more]
METC_SALTY5.031e-2228.00Cystathionine beta-lyase OS=Salmonella typhimurium... [more]
METC_BORAV5.563e-2126.46Cystathionine beta-lyase OS=Bordetella avium GN=me... [more]
YHR2_YEAST7.265e-2129.58Uncharacterized trans-sulfuration enzyme YHR112C O... [more]
STR3_YEAST1.239e-2029.11Cystathionine beta-lyase OS=Saccharomyces cerevisi... [more]

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Properties
Property NameValue
Genbank descriptionC34103H03EF PostHarvP1 Citrus clementina cDNA clone C34103H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931320 ID=FC931320; Name=FC931320; organism=Citrus clementina; type=EST; length=725bp
GCCCAAAATGGGAATCACGGCTACGGTGATTGACCCAGCTGATATGGAAG
GTTTGGAGGCAGCACTCAACAATAACAATGTCTCACTATTCTTCACCGAG
TCTCCAACCAATCCATTCCTGAGATGTGTGGATGTCAAACTGGTTTCAGA
TCTTTGCCATAAGAAAGGAGCAATAGTTTGCATAGATGGAACCTTTGCCA
CACCTCTCAATCAGAAGGCCCTCAGCCTTGGTGCTGATCTTGTACTGCAC
TCTGCAACAAAATTCATTGGTGGCCACAATGATGTCCTTGCTGGGTGCAT
TAGTGGTTCAGAGAAGTTAGTTACACAAATTCGTAATTTGCATCATGTTT
TGGGTGGTGCTCTCAACCCGAATGCCGCGTATTTGATCATTCGAGGCATG
AAGACATTGCATCTTCGTGTACAGCAACAAAATTCAACTGCGTTGAGGAT
GGCCAAGATTTTAGAGGCACATCCAAAGGTGAAGCGCGTTCACTATCCAG
GCTTGAAGAGTCATCCTGAGCATCACATTGCCACACAGCAAATGACTGGT
TTTGGTGGGGTAGTTAGTTTTGAGGTTGATGGAGACCTAACGGCCACCAT
AAAATTTATTGATGCCTTGAAAATCCCATATATTGCTCCATCCTTCGGTG
GCTGTGAGAGCATTGTTGATCAGCCAGCTATAATGTCGTATTGGGACCTT
AGCCATCGGAGAAGCTCAGTATGGG
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