FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:3..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSF (Anthranilate phosphoribosyltransferase OS=Geobacter sp. (strain FRC-32) GN=trpD PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.308e-27
Identity = 72/174 (41.38%), Postives = 98/174 (56.32%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF-VRPXEE 703
            ++ R DL+++E    +D +++ EA  A I+AF   LR KGET  EI G AR M   AT++                 L   +D+VGTGGDG NT NIST  S + AACG KVAK             DV+EALG+ +++ PE V  C++EAGIGF+ +   H AMKF + P +E
Sbjct:    9 VVEREDLSQSEMIQVMDQIMSGEATPAQIAAFITALRMKGETVAEIAGAARVMRDRATRIRVGKNVLDLDRDDINIDLETILDVVGTGGDGTNTFNISTTVSFVVAACGVKVAKHGNRSVSSACGSADVVEALGISLEVTPETVENCINEAGIGFLYAPALHGAMKFAIGPRKE 182          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BEII9 (Anthranilate phosphoribosyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=trpD PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.308e-27
Identity = 70/160 (43.75%), Postives = 89/160 (55.62%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            F   I  L +   LT AEA+A+ D +   E   A +  F + +R +GET  EI+G   AM     +V+   DA+DIVGTGGDG  T N+ST AS++ AACG  VAK             DVL ALGV   LD  GV  C+  AGIGFMM+  +H AM+ V
Sbjct:    4 FKPFIAKLATGSSLTRAEAEAAFDQIFAGEVTPAQLGGFLMAMRVRGETVDEIIGAVTAMRARMVRVDAPTDAIDIVGTGGDGHGTFNVSTLASLIVAACGVPVAKHGNRAASSRSGASDVLSALGVRTGLDSAGVEACIRGAGIGFMMAQTHHTAMRHV 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_SYMTH (Anthranilate phosphoribosyltransferase OS=Symbiobacterium thermophilum GN=trpD PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.708e-27
Identity = 69/151 (45.70%), Postives = 91/151 (60.26%), Query Frame = 2
Query:  248 DLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            DLTEA+A+A++  ++  EA  A ++AF + LR KGET  EI G AR M + A ++       VD  GTGGDG++T NIST A+ + A  G  VAK             DVLEALG+ +DL PE V RC+DE GIGF+ +   H +MK V P
Sbjct:   13 DLTEAQAEAAMTLMMTGEATPAQVAAFLMALRIKGETVAEITGAARVMRERAIRIHHSRPLVVDTCGTGGDGSHTFNISTTAAFVVAGAGVAVAKHGNRAATSLTGSADVLEALGIHLDLTPEEVGRCIDEVGIGFLYAPALHTSMKHVAP 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_SALAI (Anthranilate phosphoribosyltransferase OS=Salinispora arenicola (strain CNS-205) GN=trpD PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.708e-27
Identity = 72/164 (43.90%), Postives = 98/164 (59.76%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAE-AQASLDYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGD----AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +L+  L+   +L+ A+ A A  + +   A  A I+ F + LRAKGET  E+ GL  AM+++A +VE   D    AVD+VGTGGD A+TVNIST AS++ A  G +V K             DVLE LG+ +DL PEGV  CV EAGIGF  + ++HP M+   P
Sbjct:    8 QLLAALLRGDELSTADTAWAMGEIMSGSAGSAQIAGFAIALRAKGETPAEVSGLVEAMLQHAVRVELPEDLRATAVDVVGTGGDLAHTVNISTMASLVVAGAGVRVVKHGNRAASSSCGTADVLEFLGLPLDLGPEGVAACVAEAGIGFCFAARFHPGMRHAGP 171          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_DEHSC (Anthranilate phosphoribosyltransferase OS=Dehalococcoides sp. (strain CBDB1) GN=trpD PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27
Identity = 69/160 (43.12%), Postives = 92/160 (57.50%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E I  L+    LT  ++ + +D ++  +   A I AF   LR KGET  EI GLA  M   +T++      +DIVG GGDG NT NIST A+ + +  G KVAK             DVLEALG+ IDL+ E V+ C+++ GIGFM +  +HPAMKFV P
Sbjct:    4 EAIGSLVLGKSLTLEQSASVMDEIMEGKTTPAQIGAFLTALRVKGETAEEIAGLANVMRAKSTRISTSTPVLDIVGIGGDGINTFNISTTAAFVISGAGIKVAKHGNRAASSMCGSADVLEALGIKIDLNAEQVKICIEQIGIGFMFAPVFHPAMKFVAP 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_DEHE1 (Anthranilate phosphoribosyltransferase OS=Dehalococcoides ethenogenes (strain 195) GN=trpD PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27
Identity = 69/160 (43.12%), Postives = 92/160 (57.50%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E I  L+    LT  ++ + +D ++  +   A I AF   LR KGET  EI GLA  M   +T++      +DIVG GGDG NT NIST A+ + +  G KVAK             DVLEALG+ IDL+ E V+ C+++ GIGFM +  +HPAMKFV P
Sbjct:    4 EAIGSLVLGKSLTLEQSASVMDEIMEGKTTPAQIGAFLTALRVKGETAEEIAGLANVMRAKSTRISTSTPVLDIVGIGGDGINTFNISTTAAFVISGAGIKVAKHGNRAASSMCGSADVLEALGIKIDLNAEQVKICIEQIGIGFMFAPVFHPAMKFVAP 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_ARTS2 (Anthranilate phosphoribosyltransferase OS=Arthrobacter sp. (strain FB24) GN=trpD PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27
Identity = 70/155 (45.16%), Postives = 94/155 (60.65%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            LI  LI+  DLT    + ++D +++ EA  + I+ F V LR+KGET  EI GL  AM+ +A  V+  G+ +DIVGTGGD  NTVNIST A+++ A  GAKV K             DVLEALGV +DL  E V R  +EAGI F  +  +HP+ +
Sbjct:   17 LISALINGADLTADNTEWAMDTIMSGEATPSQIAGFLVALRSKGETVDEIAGLVEAMLAHANPVDIAGEKLDIVGTGGDQLNTVNISTMAALVCAGAGAKVVKHGNRASSSSSGSADVLEALGVRLDLPIERVARNAEEAGITFCFAQVFHPSFR 171          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_STRAW (Anthranilate phosphoribosyltransferase OS=Streptomyces avermitilis GN=trpD PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.914e-27
Identity = 70/158 (44.30%), Postives = 95/158 (60.13%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            E+++ L+   D +  +   ++D ++  EA +A I+ F V LRAKGET  EI GL RAM ++A  +E  G  VDIVGTGGDGA TVNIST +SI+ A  GAKV K             DVLE LG+ + L P+ V    +EAGI    + K+HPA++ V
Sbjct:   19 EVLNGLLDGRDQSADDTAWAMDRIMRGEATDAQIAGFLVALRAKGETVEEISGLVRAMYEHANLIEVPGATVDIVGTGGDGAKTVNISTMSSIVVAGTGAKVVKHGNRAASSASGSSDVLEKLGINLQLTPKRVAEVAEEAGITICFAVKFHPALRHV 176          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RUBXD (Anthranilate phosphoribosyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=trpD PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.914e-27
Identity = 67/153 (43.79%), Postives = 91/153 (59.48%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-----EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L+E EA+ +L+ ++      EA  AL++A    LR +GE+  EIVG ARAM ++A +V      VD  GTGGD   T+N+ST A+ +A   G  +AK             DVLEALG  I+L PE V RC++EAGIGFM +  +HPAM+ V P
Sbjct:   15 LSEGEAERALETIMEGGASPEATAALLTA----LRVRGESVQEIVGFARAMRRFAARVRAPEGVVDTCGTGGDAKGTINVSTAAAFVARGAGVVIAKHGNRAATSRAGSADVLEALGAAIELSPEQVSRCIEEAGIGFMFARTHHPAMRHVAP 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_XANP2 (Anthranilate phosphoribosyltransferase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=trpD PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.805e-27
Identity = 70/162 (43.21%), Postives = 89/162 (54.94%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F  L+  + +   LT  EA    D +++ EA  + + A  + LR +GET  EI G    M      VE   +AVD+VGTGGD + + NIST AS + A  G  VAK             DVL ALGV IDLDP G+ RC+ EAGIGFM +  +HPAMK V P
Sbjct:    4 FKPLLGKVATGASLTRDEAAYVFDKMMSGEATPSQMGALLMGLRVRGETVEEIAGAVSVMRSKMLSVEAPSEAVDVVGTGGDASGSYNISTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVRIDLDPAGISRCIAEAGIGFMFAPSHHPAMKHVGP 165          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_GEOSF1.308e-2741.38Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_BEII91.308e-2743.75Anthranilate phosphoribosyltransferase OS=Beijerin... [more]
TRPD_SYMTH1.708e-2745.70Anthranilate phosphoribosyltransferase OS=Symbioba... [more]
TRPD_SALAI1.708e-2743.90Anthranilate phosphoribosyltransferase OS=Salinisp... [more]
TRPD_DEHSC2.231e-2743.13Anthranilate phosphoribosyltransferase OS=Dehaloco... [more]
TRPD_DEHE12.231e-2743.13Anthranilate phosphoribosyltransferase OS=Dehaloco... [more]
TRPD_ARTS22.231e-2745.16Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_STRAW2.914e-2744.30Anthranilate phosphoribosyltransferase OS=Streptom... [more]
TRPD_RUBXD2.914e-2743.79Anthranilate phosphoribosyltransferase OS=Rubrobac... [more]
TRPD_XANP23.805e-2743.21Anthranilate phosphoribosyltransferase OS=Xanthoba... [more]

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Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
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