FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:3..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_NITWN (Anthranilate phosphoribosyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=trpD PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.805e-27
Identity = 69/159 (43.40%), Postives = 92/159 (57.86%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            LI  + +   LT  EA A+ + +++ EA  + +    + LR +GET  EI G   AM     +V+   DAVD+VGTGGDG+ +VN+ST AS + A  G  VAK             D L ALG+ IDL PE V RC++EAGIGFM +  +HPAMK V P
Sbjct:    7 LIGKVATGATLTREEAAAAFNSMMSGEATPSQMGGLLMALRVRGETVDEITGAVSAMRSMMLRVKAPVDAVDVVGTGGDGSGSVNVSTCASFIVAGAGVTVAKHGNRALSSRSGAADCLAALGIRIDLTPEQVGRCINEAGIGFMFAPAHHPAMKNVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_METS4 (Anthranilate phosphoribosyltransferase OS=Methylobacterium sp. (strain 4-46) GN=trpD PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.805e-27
Identity = 68/149 (45.64%), Postives = 90/149 (60.40%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            LT  EA+ + D+LL+ E   A   AF + LR +GE   EIVG A A+ +   +V     A+DIVGTGGD + + N+ST ASIL AACG  VAK             DVL ALGV + LDPEG+ RC++EAG+ FM +  +H +M+ V P
Sbjct:   17 LTREEARTAFDHLLSGEVTHAQAGAFLMALRVRGEAQDEIVGAAGALRERMVRVVAPAGAIDIVGTGGDHSGSYNVSTLASILTAACGVPVAKHGNRAASSRSGAADVLAALGVRLGLDPEGLARCLEEAGLCFMFAQAHHASMRHVAP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD1_STRCO (Anthranilate phosphoribosyltransferase 1 OS=Streptomyces coelicolor GN=trpD1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.805e-27
Identity = 74/173 (42.77%), Postives = 101/173 (58.38%), Query Frame = 2
Query:  173 PAVSDNTRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            PA  D T  ++  +  L++ L+   DL+  +   +LD ++  EA +  I+ F V LR KGET  EI GL R M ++A  +E  G  VDIVGTGGDGA TVNIST ++I+ A  GAKV K             DVLE LGV ++L P+ V    +EAGI F  + K+HPA++ V
Sbjct:    6 PAGGDTTADRS--WPALLNGLLDGRDLSADDTAWALDVIMRGEATDVQIAGFAVGLRFKGETVEEISGLVRTMYEHANVIEVPGKTVDIVGTGGDGAKTVNISTMSAIVLAGTGAKVVKHGNRAASSASGASDVLEKLGVNLELTPQRVAEVAEEAGITFCFAVKFHPALRHV 176          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_ROSS1 (Anthranilate phosphoribosyltransferase OS=Roseiflexus sp. (strain RS-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.970e-27
Identity = 69/150 (46.00%), Postives = 88/150 (58.67%), Query Frame = 2
Query:  248 DLTEAEAQASLDYLLNE-ADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            DL+E +A  +++ ++   A  A ++A    L  KGET  EI G+AR M   A  V      +D  GTGGDGA T NIST A+ +AA  GA VAK             DVLE LGV I+LD   V RC+D+AGIGFM + K+HPAM+FV P
Sbjct:   15 DLSEDQAAEAMEEIMTGMATPAQVAALLTALHLKGETDAEIAGMARVMRAKAIPVHFDAPLLDTCGTGGDGAGTFNISTTAAFIAAGAGAIVAKHGNRAMSSVCGSADVLEGLGVNIELDAASVARCLDQAGIGFMFAQKFHPAMRFVGP 164          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_METBU (Anthranilate phosphoribosyltransferase OS=Methanococcoides burtonii (strain DSM 6242) GN=trpD PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.970e-27
Identity = 69/162 (42.59%), Postives = 99/162 (61.11%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYAT----KVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK-FVRPXEE 703
            LI   DL+  E++A++  +L  A +A + AF + ++ KGET  E+ G A+ M+  A     KV+G+   VD  GTGGD  NT+NIST A+I+AAA G  VAK             DV + LGV IDL+P+ V+  +++ GIGFM++ K+HPAMK  V P +E
Sbjct:    8 LIDGHDLSMVESEAAMGQILESATDAQVGAFVMGMKMKGETSDEVAGFAKGMLNVANMIRPKVDGI--LVDTCGTGGDRHNTINISTAAAIVAAAAGVTVAKHGNHSFTSLSGSADVFKELGVKIDLEPDLVKSSIEDIGIGFMLAPKFHPAMKRMVGPRKE 167          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_ARTAT (Anthranilate phosphoribosyltransferase OS=Arthrobacter aurescens (strain TC1) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.491e-27
Identity = 69/155 (44.52%), Postives = 94/155 (60.65%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            LI  LI+  DL     + +++ ++  EA  A I+ F V LRAKGET  E+ GL  AM+++A  ++  G+ +DIVGTGGD  NTVNIST A+++AA  GAKV K             DVLEALGV +DL  E V R  +EAGI F  +  +HP+ +
Sbjct:   17 LISALINGDDLAVGNTEWAMNTIMAGEATPAQIAGFLVALRAKGETVEELAGLVEAMVQHANPIDISGEKLDIVGTGGDRLNTVNISTMAALVAAGAGAKVVKHGNRAASSASGSADVLEALGVRLDLSIEQVARNAEEAGITFCFAQVFHPSFR 171          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_STRGG (Anthranilate phosphoribosyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26
Identity = 69/156 (44.23%), Postives = 94/156 (60.26%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            L++ L+   DL+  E   ++D +++ EA +A I+ F V LRAKGET  E+ GL RAM  +A  +E  G  VDIVGTGGD A TVNIST ++I+ A  GAKV K             DVLE LGV ++L P  V    + AGI F  + K+HPA+++
Sbjct:   20 LLNPLLRGEDLSAEETAWAMDRIMSGEATDAQIAGFAVALRAKGETVDEVTGLVRAMYAHANTIEVPGRTVDIVGTGGDLAKTVNISTMSAIVIAGTGAKVVKHGNRAASSASGSSDVLEKLGVNLELTPRRVVEVAEAAGITFCFAVKFHPALRY 175          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHILW (Anthranilate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26
Identity = 68/153 (44.44%), Postives = 89/153 (58.17%), Query Frame = 2
Query:  239 SRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            SR  LT  EA+A+ D L++ +A  + I  F + LR +GET  EIVG   AM      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV +D+ PE + RC+ EAG+GFM +  +H AM+ V P
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGETVDEIVGAVTAMRSKMLTVEAPEDAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLAALGVKLDVGPEIISRCIAEAGVGFMFAQLHHSAMRHVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_NATPD (Anthranilate phosphoribosyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26
Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 2
Query:  248 DLTEAEAQASLDYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            DLT+AEA+ +   +  EA EA I A    LRAKGET  EI G A  M   A +++      VD  GTGGDG +T+N+ST +S + A  G  VAK             DVLE +GV ID +P  V  C++E G+GFM++  +HPAMK V
Sbjct:   13 DLTQAEAREAASLVFEEATEAQIGALLSALRAKGETEPEIAGFAEGMRAAARRIDPDRSPLVDTCGTGGDGHDTINVSTTSSFVVAGAGVPVAKHGNYSVSSSSGSADVLEEIGVTIDAEPPAVETCIEETGMGFMLAPVFHPAMKAV 160          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHISN (Anthranilate phosphoribosyltransferase OS=Rhizobium sp. (strain NGR234) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.889e-26
Identity = 65/153 (42.48%), Postives = 89/153 (58.17%), Query Frame = 2
Query:  239 SRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +R  L+  +A+A+ + +++  A  + I  F + LR +GET  EIVG   AM      VE   DA+DIVGTGGDGA T NIST AS++ A  G  VAK             D L  LGV +D+ PE + RC+ EAG+GFM + ++H AM+ V P
Sbjct:   13 AREALSREDARAAFEIIMSGAATPSQIGGFLMALRVRGETVDEIVGAVGAMRARMLPVEAPEDAIDIVGTGGDGAGTYNISTLASLIVAGAGVPVAKHGNRALSSKSGTADALSCLGVKLDIGPEAIARCIREAGVGFMFAQQHHSAMRHVGP 165          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_NITWN3.805e-2743.40Anthranilate phosphoribosyltransferase OS=Nitrobac... [more]
TRPD_METS43.805e-2745.64Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD1_STRCO3.805e-2742.77Anthranilate phosphoribosyltransferase 1 OS=Strept... [more]
TRPD_ROSS14.970e-2746.00Anthranilate phosphoribosyltransferase OS=Roseifle... [more]
TRPD_METBU4.970e-2742.59Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_ARTAT6.491e-2744.52Anthranilate phosphoribosyltransferase OS=Arthroba... [more]
TRPD_STRGG1.446e-2644.23Anthranilate phosphoribosyltransferase OS=Streptom... [more]
TRPD_RHILW1.446e-2644.44Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_NATPD1.446e-2643.92Anthranilate phosphoribosyltransferase OS=Natronom... [more]
TRPD_RHISN1.889e-2642.48Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
back to top