FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:3..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_METAC (Anthranilate phosphoribosyltransferase OS=Methanosarcina acetivorans GN=trpD PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.889e-26
Identity = 67/159 (42.14%), Postives = 93/159 (58.49%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGD--AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFV 688
            E I  L    DL+  EA+A++  +L+ A++  I AF + LRAKGE   EI G  R M +    ++ +     +D  GTGGDG NT+N+ST A+I+ AA G  VAK             DVLEALG+ +DL P  VR+ +++ GIGFM +  +HPAMK V
Sbjct:    6 EYIKKLEEGSDLSSEEAEAAIGEILSTAEDEEIGAFLLALRAKGEKPQEIAGFVRGMKQAGNTIKPVTPFRVIDTCGTGGDGLNTINVSTAAAIVTAAAGVPVAKHGNRAATSMSGSSDVLEALGIKVDLTPGQVRKTIEKIGIGFMFAPVFHPAMKRV 164          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_THEFY (Anthranilate phosphoribosyltransferase OS=Thermobifida fusca (strain YX) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.467e-26
Identity = 66/166 (39.76%), Postives = 100/166 (60.24%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF-VRPXEE 703
            ++ LI  L++   LT  + + +++ +++  A +A I+ F + LRAKGE+  E+ GLA+ M+ +A  +   G  +DIVGTGGD A+TVN+ST ASI+A+A GA+V K             DVLE LGV+IDLDP       +E  I F  +  YHP++K+  +P  E
Sbjct:    6 WSHLISALLNGTSLTADDTKWAMNEIMSGSATDAQIAGFAIALRAKGESVAEVRGLAQGMLDHAVTISVPGATLDIVGTGGDRAHTVNVSTMASIVASAAGARVVKHGNRAASSSCGTADVLERLGVIIDLDPADAVAVAEEVDITFCFAPLYHPSLKYAAKPRRE 171          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_SALRD (Anthranilate phosphoribosyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.467e-26
Identity = 68/162 (41.98%), Postives = 95/162 (58.64%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            N L+  +     L+  EA+ ++  +++  A +  I+A  + LR +GET  E+VG  + M ++A  VE      +D+ GTGGDGA+T NIST AS +AA  GA VAK             DVLEALGV IDL+ EGV  C+ EAGI F+ +  +HPAM+ V P
Sbjct:    2 NTLLQTIADGDPLSRPEAEEAMATMMSGSARDEHIAALLMGLRTRGETLDELVGFTKTMREFAVSVETDDPQTIDLCGTGGDGASTFNISTTASFIAAGAGATVAKHGNRSVSSQSGSADVLEALGVQIDLEKEGVEHCLHEAGIAFLFAPFFHPAMRHVMP 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP2 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=trpD PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.467e-26
Identity = 69/162 (42.59%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            F  +I  + +   LT  EA  + D +++ +A  + + A  + LR +GET  EI G    M      V    DAVD+VGTGGDG+ +VN+ST  S + A CG  VAK             DVL ALGV ID+ P+ V RCV EAGIGFM +  +HPAMK V P
Sbjct:    4 FKAVIAKVATGASLTRDEAANAFDAMMSGDATPSQMGALLMGLRVRGETVDEITGAVTTMRAKMLTVAAPPDAVDVVGTGGDGSGSVNVSTCTSFVVAGCGVPVAKHGNRALSSKSGAADVLNALGVKIDITPDHVGRCVAEAGIGFMFAPTHHPAMKNVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHILO (Anthranilate phosphoribosyltransferase OS=Rhizobium loti GN=trpD PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.467e-26
Identity = 64/149 (42.95%), Postives = 88/149 (59.06%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L+  EA+ + D +++ +A    I  F + LR +GET  EI G    M     +VE    A+DIVGTGGD +++VNISTG++ + AA G  VAK             DVL ALGV ID+ P+ + RC+ EAG+GFM +  +HPAMK V P
Sbjct:   17 LSFEEAREAFDIIMSGDATPGQIGGFLMALRVRGETVSEISGAVATMRAKMLRVEAPAGAIDIVGTGGDNSHSVNISTGSAFVIAAAGVPVAKHGNRGLSSLTGAADVLIALGVKIDIPPDAIGRCIHEAGVGFMFAPAHHPAMKHVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHIL3 (Anthranilate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.467e-26
Identity = 66/153 (43.14%), Postives = 89/153 (58.17%), Query Frame = 2
Query:  239 SRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            SR  LT  EA+++ D L++ +A  + I  F + LR +GET  EIVG   +M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV +D+ PE + RC+ EAG+GFM +  +H AM+ V P
Sbjct:   13 SREPLTREEARSAFDILMSGQATPSQIGGFLMALRVRGETVDEIVGAVASMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLAALGVKLDVGPEIISRCIAEAGVGFMFAQMHHSAMRHVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_VEREI (Anthranilate phosphoribosyltransferase OS=Verminephrobacter eiseniae (strain EF01-2) GN=trpD PE=3 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26
Identity = 66/135 (48.89%), Postives = 82/135 (60.74%), Query Frame = 2
Query:  296 EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E   A+ +A    LR K ET GEI   A+ M +++TKV+       VDIVGTGGDGA+T NIST A  +AAA GAKV+K             DV+EALG+ I L PE + RC+ E GIGFM +  +HPAMK V P
Sbjct:   34 ELSPAMTAAIITGLRVKKETIGEITAAAQVMREFSTKVQVPDRKHLVDIVGTGGDGASTFNISTCAMFVAAAAGAKVSKHGGRSVSSKSGSADVMEALGIHIHLAPEAIARCIAEVGIGFMFAPNHHPAMKNVAP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_THISH (Anthranilate phosphoribosyltransferase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=trpD PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26
Identity = 66/157 (42.04%), Postives = 91/157 (57.96%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            + I  +  R+DL+E E  A +  ++N EA  A +  F V L  KGET  E+   AR M   AT+VE   G  VD  GTGGD + + NIST ++++ AA G +VAK             DVLEA GV +DL PE V RC+++ G+GF+ + K+H AMK
Sbjct:    5 QAIRAVTQRIDLSEQEMTAVMGLIMNGEATPAQMGGFLVGLAMKGETVDEVTAAARVMRDLATRVEVQAGHLVDTCGTGGDASGSFNISTASALVVAAAGGRVAKHGNRSVSSKSGSADVLEAAGVNLDLSPEQVARCIEQVGVGFLFAPKHHGAMK 161          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BRASO (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=trpD PE=3 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26
Identity = 66/149 (44.30%), Postives = 88/149 (59.06%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L+  +A ++ D +++ EA  + + A  + LR +GET  EI G    M     +V+   +AVDIVGTGGDG+ +VN+ST AS + A  G  VAK             DVL ALGV IDL P+ V RC+ EAGIGFM +  +HPAMK V P
Sbjct:   17 LSREQAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPANAVDIVGTGGDGSGSVNVSTCASFIVAGAGVPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCIREAGIGFMFAPAHHPAMKNVGP 165          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_BRASB (Anthranilate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=trpD PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26
Identity = 67/149 (44.97%), Postives = 87/149 (58.39%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            L+  EA ++ D +++ EA  + + A  + LR +GET  EI G    M     +V+    AVDIVGTGGDG+ +VN+ST A+ + A  G  VAK             DVL ALGV IDL P+ V RCV EAGIGFM +  +HPAMK V P
Sbjct:   17 LSREEAASAFDSMMSGEATPSQMGALLMALRVRGETVEEITGAVSVMRAKMLRVDAPAGAVDIVGTGGDGSGSVNVSTCAAFIVAGAGIPVAKHGNRALSSRSGAADVLAALGVKIDLKPDQVGRCVQEAGIGFMFAPAHHPAMKNVGP 165          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_METAC1.889e-2642.14Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_THEFY2.467e-2639.76Anthranilate phosphoribosyltransferase OS=Thermobi... [more]
TRPD_SALRD2.467e-2641.98Anthranilate phosphoribosyltransferase OS=Saliniba... [more]
TRPD_RHOP22.467e-2642.59Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_RHILO2.467e-2642.95Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_RHIL32.467e-2643.14Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_VEREI4.207e-2648.89Anthranilate phosphoribosyltransferase OS=Verminep... [more]
TRPD_THISH4.207e-2642.04Anthranilate phosphoribosyltransferase OS=Thioalka... [more]
TRPD_BRASO4.207e-2644.30Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]
TRPD_BRASB4.207e-2644.97Anthranilate phosphoribosyltransferase OS=Bradyrhi... [more]

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Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
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