FC931331

Overview
NameFC931331
Unique NameFC931331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:3..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_XANCP (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 66/135 (48.89%), Postives = 81/135 (60.00%), Query Frame = 2
Query:  296 EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E  +A++SA    LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HPAMK V P
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_XANCB (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 66/135 (48.89%), Postives = 81/135 (60.00%), Query Frame = 2
Query:  296 EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E  +A++SA    LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HPAMK V P
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRCHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_XANC8 (Anthranilate phosphoribosyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 66/135 (48.89%), Postives = 81/135 (60.00%), Query Frame = 2
Query:  296 EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E  +A++SA    LR K ET GEI G A  M +++ +VE       VDIVGTGGDG++T NIST A  +AAA GAKVAK             D LEALG VI+L PE V   + + GIGFM +  +HPAMK V P
Sbjct:   34 EVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAP 168          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RHOFD (Anthranilate phosphoribosyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 60/138 (43.48%), Postives = 84/138 (60.87%), Query Frame = 2
Query:  287 LLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            +  E    +++A    LR K ET GEI   A+ M +++TKV        VDIVGTGGDG++T NIST A  +AAA GA+V+K             DV+E+LGV I+L PE + +C+++ G+GFM +  +HPAMK V P
Sbjct:   35 MTGEWSPVMMAALITGLRVKKETIGEITAAAQVMREFSTKVNVADTSHLVDIVGTGGDGSHTFNISTCAMFVAAAAGARVSKHGGRSVSSKSGSADVMESLGVNINLSPEAIAQCIEQVGVGFMFAPNHHPAMKNVAP 172          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PSEAE (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 63/154 (40.91%), Postives = 90/154 (58.44%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            +++++DLT  E QA +  ++  +  +A I AF + +R K ET  EIVG    M + A  V+   L   VD+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LEA G+ ++L  E V RC+D  G+GFM +  +H AMK+
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFMFAQVHHKAMKY 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PSEAB (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 63/154 (40.91%), Postives = 90/154 (58.44%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            +++++DLT  E QA +  ++  +  +A I AF + +R K ET  EIVG    M + A  V+   L   VD+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LEA G+ ++L  E V RC+D  G+GFM +  +H AMK+
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFMFAQVHHKAMKY 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA8 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 63/154 (40.91%), Postives = 90/154 (58.44%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKF 685
            +++++DLT  E QA +  ++  +  +A I AF + +R K ET  EIVG    M + A  V+   L   VD+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LEA G+ ++L  E V RC+D  G+GFM +  +H AMK+
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFMFAQVHHKAMKY 163          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_PSE14 (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 65/153 (42.48%), Postives = 89/153 (58.17%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASL-DYLLNEADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            +++++DLT  E +  + + +  +  EA I AF + +R K ET  EIVG    M + A+ VE   L   VDIVGTGGDGAN  N+ST ++ + AA G KVAK             D+LEA GV ++L P  V RC+D  GIGFM +  +H AMK
Sbjct:   10 VVNQLDLTTDEMRDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELASSVELKTLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCKVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIGFMFAQSHHTAMK 162          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSL (Anthranilate phosphoribosyltransferase OS=Geobacter sulfurreducens GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 70/166 (42.17%), Postives = 93/166 (56.02%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLNE-ADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKV---EGLGDA------------VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMK 682
            ++ R+DLTEAE    +D +++  A  A I+AF   LR KGET  EI G AR M   AT +   +G+ D             +D+VGTGGDG NT NIST  S + A+CG KVAK             DVLE+LGV +D+ PE V + + + GIGF+ +   H AMK
Sbjct:    9 VVERIDLTEAEMIEVMDQIMSGGATPAQIAAFITALRMKGETVEEITGAARVMRDRATPIRVGKGVLDIDRDDINIDQETILDVVGTGGDGTNTFNISTTVSFVVASCGVKVAKHGNRAVSSACGSADVLESLGVNLDVTPETVEQAIAKIGIGFLFAPALHGAMK 174          
BLAST of FC931331 vs. ExPASy Swiss-Prot
Match: TRPD_RALPJ (Anthranilate phosphoribosyltransferase OS=Ralstonia pickettii (strain 12J) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25
Identity = 66/137 (48.18%), Postives = 81/137 (59.12%), Query Frame = 2
Query:  296 EADEALISAFFVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA----VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRP 694
            E    + +A  + LR K ET GEI   A  M ++ATKV+   +     VDIVGTGGDGANT NIST +  +AAA GA++AK             DVLEALGV I L PE V   ++ AGIGFM +  +HPAMK V P
Sbjct:   34 EMSPVMAAALTMGLRVKKETIGEIAAAATVMREFATKVDVPAEVSDHFVDIVGTGGDGANTFNISTASMFVAAAAGARIAKHGGRGVSSKSGSADVLEALGVNIMLTPEQVAESIETAGIGFMFAPNHHPAMKNVAP 170          
The following BLAST results are available for this feature:
BLAST of FC931331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_XANCP6.075e-2548.89Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANCB6.075e-2548.89Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_XANC86.075e-2548.89Anthranilate phosphoribosyltransferase OS=Xanthomo... [more]
TRPD_RHOFD6.075e-2543.48Anthranilate phosphoribosyltransferase OS=Rhodofer... [more]
TRPD_PSEAE6.075e-2540.91Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEAB6.075e-2540.91Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEA86.075e-2540.91Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSE146.075e-2542.48Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_GEOSL6.075e-2542.17Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_RALPJ7.935e-2548.18Anthranilate phosphoribosyltransferase OS=Ralstoni... [more]

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Properties
Property NameValue
Genbank descriptionC34104A02EF PostHarvP1 Citrus clementina cDNA clone C34104A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931331 ID=FC931331; Name=FC931331; organism=Citrus clementina; type=EST; length=705bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAGTAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGCCCTC
AAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTTTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGATATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCANGTGAG
GAAAA
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