FC931388

Overview
NameFC931388
Unique NameFC931388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9336 contig Ccv1_Contig9336:82..826. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931388 vs. ExPASy Swiss-Prot
Match: UBIQ_RABIT (Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.062e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3
Query:  216 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 443
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 135.191 bits (339), Expect = 3.640e-31
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 3
Query:    3 ETLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 215
            +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 114.775 bits (286), Expect = 4.374e-29
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 3
Query:  444 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 632
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63          

HSP 4 Score: 33.8834 bits (76), Expect = 4.374e-29
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2
Query:  620 HIQKESTLHLVLRLKGG 670
            +IQKESTLHLVLRL+GG
Sbjct:   60 NIQKESTLHLVLRLRGG 76          
BLAST of FC931388 vs. ExPASy Swiss-Prot
Match: UBIQ_PONPY (Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.062e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3
Query:  216 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 443
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 135.191 bits (339), Expect = 3.640e-31
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 3
Query:    3 ETLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 215
            +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 114.775 bits (286), Expect = 4.374e-29
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 3
Query:  444 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 632
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63          

HSP 4 Score: 33.8834 bits (76), Expect = 4.374e-29
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2
Query:  620 HIQKESTLHLVLRLKGG 670
            +IQKESTLHLVLRL+GG
Sbjct:   60 NIQKESTLHLVLRLRGG 76          
BLAST of FC931388 vs. ExPASy Swiss-Prot
Match: UBIQ_PLUXY (Ubiquitin OS=Plutella xylostella PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.062e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3
Query:  216 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 443
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 135.191 bits (339), Expect = 3.640e-31
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 3
Query:    3 ETLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 215
            +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 114.775 bits (286), Expect = 4.374e-29
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 3
Query:  444 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 632
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63          

HSP 4 Score: 33.8834 bits (76), Expect = 4.374e-29
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2
Query:  620 HIQKESTLHLVLRLKGG 670
            +IQKESTLHLVLRL+GG
Sbjct:   60 NIQKESTLHLVLRLRGG 76          
BLAST of FC931388 vs. ExPASy Swiss-Prot
Match: UBIQ_PIG (Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.062e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3
Query:  216 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 443
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 135.191 bits (339), Expect = 3.640e-31
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 3
Query:    3 ETLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 215
            +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 114.775 bits (286), Expect = 4.374e-29
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 3
Query:  444 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 632
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63          

HSP 4 Score: 33.8834 bits (76), Expect = 4.374e-29
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2
Query:  620 HIQKESTLHLVLRLKGG 670
            +IQKESTLHLVLRL+GG
Sbjct:   60 NIQKESTLHLVLRLRGG 76          
BLAST of FC931388 vs. ExPASy Swiss-Prot
Match: UBIQ_PANTR (Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.062e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3
Query:  216 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 443
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 135.191 bits (339), Expect = 3.640e-31
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 3
Query:    3 ETLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 215
            +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 114.775 bits (286), Expect = 4.374e-29
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 3
Query:  444 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 632
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63          

HSP 4 Score: 33.8834 bits (76), Expect = 4.374e-29
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2
Query:  620 HIQKESTLHLVLRLKGG 670
            +IQKESTLHLVLRL+GG
Sbjct:   60 NIQKESTLHLVLRLRGG 76          
BLAST of FC931388 vs. ExPASy Swiss-Prot
Match: UBIQ_OPHHA (Ubiquitin OS=Ophiophagus hannah PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.062e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3
Query:  216 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 443
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 135.191 bits (339), Expect = 3.640e-31
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 3
Query:    3 ETLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 215
            +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 114.775 bits (286), Expect = 4.374e-29
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 3
Query:  444 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 632
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63          

HSP 4 Score: 33.8834 bits (76), Expect = 4.374e-29
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2
Query:  620 HIQKESTLHLVLRLKGG 670
            +IQKESTLHLVLRL+GG
Sbjct:   60 NIQKESTLHLVLRLRGG 76          
BLAST of FC931388 vs. ExPASy Swiss-Prot
Match: UBIQ_MOUSE (Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.062e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3
Query:  216 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 443
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 135.191 bits (339), Expect = 3.640e-31
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 3
Query:    3 ETLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 215
            +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 114.775 bits (286), Expect = 4.374e-29
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 3
Query:  444 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 632
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63          

HSP 4 Score: 33.8834 bits (76), Expect = 4.374e-29
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2
Query:  620 HIQKESTLHLVLRLKGG 670
            +IQKESTLHLVLRL+GG
Sbjct:   60 NIQKESTLHLVLRLRGG 76          
BLAST of FC931388 vs. ExPASy Swiss-Prot
Match: UBIQ_MANSE (Ubiquitin OS=Manduca sexta PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.062e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3
Query:  216 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 443
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 135.191 bits (339), Expect = 3.640e-31
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 3
Query:    3 ETLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 215
            +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 114.775 bits (286), Expect = 4.374e-29
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 3
Query:  444 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 632
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63          

HSP 4 Score: 33.8834 bits (76), Expect = 4.374e-29
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2
Query:  620 HIQKESTLHLVLRLKGG 670
            +IQKESTLHLVLRL+GG
Sbjct:   60 NIQKESTLHLVLRLRGG 76          
BLAST of FC931388 vs. ExPASy Swiss-Prot
Match: UBIQ_MACFA (Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.062e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3
Query:  216 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 443
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 135.191 bits (339), Expect = 3.640e-31
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 3
Query:    3 ETLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 215
            +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 114.775 bits (286), Expect = 4.374e-29
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 3
Query:  444 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 632
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63          

HSP 4 Score: 33.8834 bits (76), Expect = 4.374e-29
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2
Query:  620 HIQKESTLHLVLRLKGG 670
            +IQKESTLHLVLRL+GG
Sbjct:   60 NIQKESTLHLVLRLRGG 76          
BLAST of FC931388 vs. ExPASy Swiss-Prot
Match: UBIQ_ICTPU (Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.062e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3
Query:  216 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 443
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 135.191 bits (339), Expect = 3.640e-31
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 3
Query:    3 ETLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 215
            +TLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76          

HSP 3 Score: 114.775 bits (286), Expect = 4.374e-29
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 3
Query:  444 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRR 632
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63          

HSP 4 Score: 33.8834 bits (76), Expect = 4.374e-29
Identity = 15/17 (88.24%), Postives = 17/17 (100.00%), Query Frame = 2
Query:  620 HIQKESTLHLVLRLKGG 670
            +IQKESTLHLVLRL+GG
Sbjct:   60 NIQKESTLHLVLRLRGG 76          
The following BLAST results are available for this feature:
BLAST of FC931388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
UBIQ_RABIT2.062e-3496.05Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1[more]
UBIQ_PONPY2.062e-3496.05Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2[more]
UBIQ_PLUXY2.062e-3496.05Ubiquitin OS=Plutella xylostella PE=3 SV=1[more]
UBIQ_PIG2.062e-3496.05Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1[more]
UBIQ_PANTR2.062e-3496.05Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2[more]
UBIQ_OPHHA2.062e-3496.05Ubiquitin OS=Ophiophagus hannah PE=3 SV=1[more]
UBIQ_MOUSE2.062e-3496.05Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1[more]
UBIQ_MANSE2.062e-3496.05Ubiquitin OS=Manduca sexta PE=3 SV=1[more]
UBIQ_MACFA2.062e-3496.05Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=... [more]
UBIQ_ICTPU2.062e-3496.05Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104F01EF PostHarvP1 Citrus clementina cDNA clone C34104F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931388 ID=FC931388; Name=FC931388; organism=Citrus clementina; type=EST; length=744bp
GTGAAACCCTAACCGGCAAGACCATTACTCTCGAAGTCGAGAGCTCCGAC
ACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCTCC
GGACCAGCAGCGTCTGATCTTCGCCGGAAAACAGCTCGAAGACGGCCGCA
CCTTGGCCGATTACAATATCCAAAAGGAATCGACGCTTCATCTGGTGCTT
CGTCTCCGTGGAGGCATGCAGATCTTCGTGAAAACCCTAACCGGCAAGAC
CATTACTCTCGAAGTTGAGAGCTCCGACACGATCGACAACGTCAAGGCCA
AGATCCAGGACAAGGAAGGGATTCCGCCGGACCAGCAGAGGCTGATCTTC
GCCGGAAAGCAACTCGAGGACGGCCGCACCTTGGCCGATTACAATATCCA
GAAGGAATCAACTCTTCACCTCGTGCTTCGTCTCCGTGGGGGCATGCAGA
TATTCGTCAAAACCCTAACGGGAAAGACGATTACCCTCGAAGTCGAGAGC
TCCGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGAT
TCCGCCGGACCAGCAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGATG
GAAGGACGCTCGCGGATTACACATTCAGAAGGAATCAACTCTTCATCTGG
TTTTGCGTCTGAAGGGTGGCATGCAGATTTTTGTTAGACATTGACCGGGA
AGACGATTACCTGGAGGTAGAGAGTCTGATACATTGACATGTCA
back to top