FC931395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_KLEP3 (Spermidine synthase OS=Klebsiella pneumoniae (strain 342) GN=speE PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20 Identity = 56/186 (30.11%), Postives = 92/186 (49.46%), Query Frame = 1 Query: 202 NNPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 +NP+W H V +L+ K+++Q++++F++ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + + K V ++Y P + G ++DPR L I D V F+ Q + +D II D +DP+GP + L F++ + L PGGV Sbjct: 3 DNPLWHETLHDHFGQYFSVDNVLYHEKTDHQDLIIFDNRAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGNAKHVLIIGGGDGAMLREVSRHRSIETITMVEIDAGVVSFCRQYLPNHSAGAYDDPRFTLVIDDGVNFVNQTTQ-TFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGV 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_STRMK (Spermidine synthase OS=Stenotrophomonas maltophilia (strain K279a) GN=speE PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.674e-20 Identity = 57/192 (29.69%), Postives = 92/192 (47.92%), Query Frame = 1 Query: 220 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 G A ++ L + +S +Q++ +F++ +G ++ +DG + LT KD Y EMI+H L + +PK V ++K+FPEL +D R L D V ++ P G D +IVDS+DPVGP + L K F+++ KAL+ G+L +ES + LI +M Sbjct: 16 GSAIGYRITGKLDEVQSPFQKIEIFQTTDWGNLMTIDGAIMLTSKDNFFYHEMISHPVLFTHAAPKRVVIIGGGDCGTLREVLKHTGVESVTQCDIDEQVTVMARKHFPELCDSNDDARAELLFDDGVAYMANCPAGSVDVVIVDSTDPVGPGEGLFNKAFYESCFKALKDDGILVQQSESPLMQLELINEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_CLOTE (Spermidine synthase OS=Clostridium tetani GN=speE PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.561e-20 Identity = 57/176 (32.39%), Postives = 91/176 (51.70%), Query Frame = 1 Query: 238 KVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELA-VGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 657 K+KE L + K+EYQ++ + ++ A G++LVLDGIVQ + KDE Y EMI H+PL + P+PK V KK+ PE++ ED R + IGD ++++ + + E+D +I+DS+DP G A+ L F+ I++ L G+ E+ Sbjct: 18 KIKETLVRKKTEYQDLAIVDTYALGRMLVLDGIVQTSIKDEYVYHEMITHIPLYTHPNPKKVLVVGGGDGGTIREILKHPSVEKAVLCEIDEEVVKECKKHLPEISNNALEDSRCEVFIGDGIKYVNE-HKNEFDVVIIDSTDPFGAAEGLFGGSFYGKISECLTEDGIFVAQTET 192
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_XYLFM (Spermidine synthase OS=Xylella fastidiosa (strain M12) GN=speE PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 58/192 (30.21%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 220 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 G A +V L + +S +Q++ ++ S +GK++V+DG + LT +D Y EMI+H L + +PK V ++K+FPEL DPR L D V ++ P D IIVDS+DP+GPA+ L + F+++ +AL+ G+L +ES LI++M Sbjct: 16 GSAIGFRVTGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFIYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHFPELCTSNNDPRATLLFSDGVAYMADCPTNSVDVIIVDSTDPIGPAKGLFNRTFYESCFRALKNDGLLIQQSESPLALLELIKEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_XYLFA (Spermidine synthase OS=Xylella fastidiosa GN=speE PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 58/192 (30.21%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 220 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 G A ++ L + +S +Q++ ++ S +GK++V+DG + LT +D Y EMI+H L + +PK V ++K+FPEL DPR L D V ++ P D IIVDS+DPVGPA+ L + F+++ +AL+ G+L +ES LI++M Sbjct: 16 GSAIGFRITGKLDEVQSPFQKIEIYNSTDWGKLMVIDGALMLTSRDNFLYHEMISHPALFTHTAPKCVVIIGGGDCGTLREVLKHPDIEQVTQCDIDEQVTRMAEKHFPELCTSNNDPRATLLFSDGVAYMTDCPTNSVDVIIVDSTDPVGPAKGLFNRTFYESCFRALKNDGLLVQQSESPLALLELIKEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_KLEP7 (Spermidine synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=speE PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 55/186 (29.57%), Postives = 91/186 (48.92%), Query Frame = 1 Query: 202 NNPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 +NP+W H V +L+ K+++Q++++F++ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + + K V ++Y P G ++DPR L I D V F+ Q + +D II D +DP+GP + L F++ + L PGG+ Sbjct: 3 DNPLWHETLHDHFGQYFSVDNVLYHEKTDHQDLIIFDNRAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGNAKHVLIIGGGDGAMLREVSRHRSIETITMVEIDAGVVSFCRQYLPNHNAGAYDDPRFTLVIDDGVNFVNQTTQ-TFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_THEVO (Probable spermidine synthase OS=Thermoplasma volcanium GN=speE PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20 Identity = 61/209 (29.19%), Postives = 99/209 (47.37%), Query Frame = 1 Query: 136 VVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKT-----------------------------------VSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 657 ++ WFSE S + + S +V + L K++YQ + +F++ +GK+L +DG VQLTE+DE Y E+I +P +P VSK++FP+L+ F D RV L I D ++++R+ ++D +I+DS+DP GPA+ L F+ I K L GGV+ + + S Sbjct: 3 LIENWFSERYSDNLQL----------------SFRVSDQLLSIKTDYQRIDLFDTYDFGKLLAIDGTVQLTERDEYIYHELITMIPYHMTKNPPQSALVIGGGDGGAARRLLDLGLNKIVNVEIDGQVVEVSKRFFPDLSSAFTDKRVNLIIDDGIKYVRKCNE-KFDLVIIDSTDPEGPAEGLFSMEFYSDITKILSDGGVIVSQSGS 194
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_CLOBA (Spermidine synthase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=speE PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20 Identity = 60/190 (31.58%), Postives = 90/190 (47.37%), Query Frame = 1 Query: 211 MWPGEAH------SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 657 +W E H S++V L+ +S++Q + + ES +G+ LDG++ +TEKDE Y +MI H+P+ + P+ K V KKY P+ A E+ RV + D ++F+R +YD IIVDS+DP GP + L K F+ KAL G+L N ES Sbjct: 3 LWYTEKHTEDVKFSIRVDRELYTEQSKFQRIDILESKEFGRFFTLDGLMMVTEKDEFIYHDMIVHVPMATNPNIKKVLVIGAGDGGTIRELTRYKTIEKIDMVEIDESVVEACKKYLPKTACKLEEERVNIVYEDGLKFVRN-KENDYDLIIVDSTDPFGPGEGLFTKEFYGNCYKALSEDGILVNQHES 191
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_STRM5 (Spermidine synthase OS=Stenotrophomonas maltophilia (strain R551-3) GN=speE PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.327e-19 Identity = 57/192 (29.69%), Postives = 90/192 (46.88%), Query Frame = 1 Query: 220 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDM 690 G A ++ L + +S +Q++ +F + +G ++ +DG + LT KD Y EMI+H L + +PK V ++K+FPEL +D R L D V ++ P G D +IVDS+DPVGP + L K F+ + KAL+ G+L +ES + LI +M Sbjct: 16 GSAIGYRITGKLDEVQSPFQKIEIFRTTDWGNLMTIDGAIMLTSKDNFFYHEMISHPVLFTHAAPKRVVIIGGGDCGTLREVLKHKGVESVTQCDIDEQVTVMARKHFPELCDSNDDARAELLFDDGVAYMANCPAGSVDVVIVDSTDPVGPGEGLFNKAFYASCFKALKDDGILVQQSESPLMQLELINEM 207
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_STRR6 (Spermidine synthase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=speE PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.733e-19 Identity = 55/184 (29.89%), Postives = 91/184 (49.46%), Query Frame = 1 Query: 211 MWPGEAH------SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPK-----------------------------------TVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVL 639 +W E H SL+ + L+ GKSE+Q++ V ++ A+GK+L+L+G V ++ D+ Y EM H+P+ P+PK V ++YFP+ A G +DPRV ++ + + FLR +YD II D++DP G + L K F+ +AL+ G++ Sbjct: 3 LWFSEVHTPDVKLSLRTAKQLYAGKSEWQDIEVLDTPAFGKILILNGHVLFSDADDFVYNEMTVHVPMAVHPNPKKVLVIGGGDGGVAQVLTLYPELEQIDIVEPDEMLVEVCREYFPDFAAGLDDPRVTIYYQNGLRFLRNC-EDDYDIIINDATDPFGHTEGLFTKEFYGNSYRALKEDGIM 185 The following BLAST results are available for this feature:
BLAST of FC931395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931395 ID=FC931395; Name=FC931395; organism=Citrus clementina; type=EST; length=712bpback to top |