FC931395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_STRPN (Spermidine synthase OS=Streptococcus pneumoniae GN=speE PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.733e-19 Identity = 55/184 (29.89%), Postives = 91/184 (49.46%), Query Frame = 1 Query: 211 MWPGEAH------SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPK-----------------------------------TVSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVL 639 +W E H SL+ + L+ GKSE+Q++ V ++ A+GK+L+L+G V ++ D+ Y EM H+P+ P+PK V ++YFP+ A G +DPRV ++ + + FLR +YD II D++DP G + L K F+ +AL+ G++ Sbjct: 3 LWFSEVHTPDVKLSLRTAKQLYAGKSEWQDIEVLDTPAFGKILILNGHVLFSDADDFVYNEMTVHVPMAVHPNPKKVLVIGGGDGGVAQVLTLYPELEQIDIVEPDEMLVEVCREYFPDFAAGLDDPRVTIYYQNGLRFLRNC-EDDYDIIINDATDPFGHTEGLFTKEFYGNSYRALKEDGIM 185
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_YERPP (Spermidine synthase OS=Yersinia pestis (strain Pestoides F) GN=speE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19 Identity = 53/168 (31.55%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V+ +LF+ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K V ++Y P + G ++DPR +L I D V F+ Q ++D II D +DP+GP + L F++ A++L GG+ Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTE-KFDVIISDCTDPIGPGESLFTSVFYEGCARSLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_YERPN (Spermidine synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=speE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19 Identity = 53/168 (31.55%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V+ +LF+ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K V ++Y P + G ++DPR +L I D V F+ Q ++D II D +DP+GP + L F++ A++L GG+ Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTE-KFDVIISDCTDPIGPGESLFTSVFYEGCARSLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_YERPG (Spermidine synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=speE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19 Identity = 53/168 (31.55%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V+ +LF+ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K V ++Y P + G ++DPR +L I D V F+ Q ++D II D +DP+GP + L F++ A++L GG+ Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTE-KFDVIISDCTDPIGPGESLFTSVFYEGCARSLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_YERPE (Spermidine synthase OS=Yersinia pestis GN=speE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19 Identity = 53/168 (31.55%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V+ +LF+ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K V ++Y P + G ++DPR +L I D V F+ Q ++D II D +DP+GP + L F++ A++L GG+ Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTE-KFDVIISDCTDPIGPGESLFTSVFYEGCARSLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_YERPA (Spermidine synthase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=speE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19 Identity = 53/168 (31.55%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V+ +LF+ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K V ++Y P + G ++DPR +L I D V F+ Q ++D II D +DP+GP + L F++ A++L GG+ Sbjct: 21 VENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTE-KFDVIISDCTDPIGPGESLFTSVFYEGCARSLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_THEON (Probable spermidine synthase OS=Thermococcus onnurineus (strain NA1) GN=speE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19 Identity = 63/191 (32.98%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 220 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSP--------------------KTVSKKYFPELAV---------------GFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIED 687 G +VKE LF+ +++YQ + ++E+ +GK+LVLDG VQL E E +Y E + H + + P+P KTV K E+ FEDPR L + D VE+L+ ++D IIVDS+DPVGPA+ L + FF + L G+ A S++L T+ + D Sbjct: 17 GYGVGFRVKERLFETQTKYQRLELYETEGFGKLLVLDGTVQLVEMGEESYHEPLVHPVMLAHPNPRRVLIIGGGDGGTLREVLRHKTVEKAIMVEIDEMVIEVSRIYMNVARGAFEDPRAELIVSDGVEYLKNTDE-KFDVIIVDSTDPVGPAKMLFSEGFFRNAYEKLNDNGLYITQAGSVYLFTNELLD 206
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_THEAC (Probable spermidine synthase OS=Thermoplasma acidophilum GN=speE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19 Identity = 63/226 (27.88%), Postives = 103/226 (45.58%), Query Frame = 1 Query: 136 VVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKT-----------------------------------VSKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAESMWLHTHLIEDMISICRE 708 ++ WFSE S + + S +V + L K++YQ + +F++ +GK+L +DG VQLTE+DE Y E+I +P P P VSK++FP L+ F D V+L I D +++++ ++D II+DS+DP GPA+ L K F++ K + G V+ + + S + I+ S RE Sbjct: 3 LIENWFSERYSDNLQL----------------SFRVSDQLLSIKTDYQRIDLFDTYDFGKLLAIDGTVQLTERDEFIYHELITMVPYHLTPRPPENALIIGGGDGGAARRLIDLGLKHIVNVEIDDQVVEVSKRFFPSLSSAFNDSHVKLLIQDGIKYVKNTSE-KFDLIIIDSTDPEGPAEGLFSKDFYNDTRKIMNEGAVIVSQSGSPFYQPKAIKLAYSGMRE 211
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_ERWCT (Spermidine synthase OS=Erwinia carotovora subsp. atroseptica GN=speE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19 Identity = 54/168 (32.14%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V +L+ K+++Q++++FE+ A G+V+ LDG+VQ TE+DE Y EM+ H+PL S + K V ++Y P + G ++DPR L I D V F+RQ ++D II D +DP+GP + L F+ A++L GG+ Sbjct: 21 VDRVLYHEKTDHQDLIIFENDALGRVMALDGVVQTTERDEFIYHEMLTHVPLLSHGNAKRVLIIGGGDGGMLREVSRHHGVEQITMVEIDAGVVEFCRQYLPNHSAGSYDDPRFNLVIDDGVNFVRQCSE-KFDVIISDCTDPIGPGESLFTSDFYQGCARSLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_YERE8 (Spermidine synthase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=speE PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.861e-19 Identity = 52/168 (30.95%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V+ +L++ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K V ++Y P + G ++DPR +L I D V F+ Q ++D II D +DP+GP + L F++ A++L GG+ Sbjct: 21 VENVLYREKTEHQDLVIFENPVLGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTE-KFDVIISDCTDPIGPGESLFTSAFYEGCARSLNEGGI 187 The following BLAST results are available for this feature:
BLAST of FC931395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931395 ID=FC931395; Name=FC931395; organism=Citrus clementina; type=EST; length=712bpback to top |