FC931395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_ESCF3 (Spermidine synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=speE PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.861e-19 Identity = 52/168 (30.95%), Postives = 85/168 (50.60%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V +L+ K+++Q++++FE+ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + K V ++Y P G ++DPR +L I D V F+ Q + +D II D +DP+GP + L F++ + L PGG+ Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKDVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQ-TFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_PECCP (Spermidine synthase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=speE PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.043e-19 Identity = 54/168 (32.14%), Postives = 85/168 (50.60%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V +L+ K+++Q++++FE+ A G+V+ LDG+VQ TE+DE Y EM+ H+PL S + K V ++Y P + G ++DPR L I D V F+RQ ++D II D +DP+GP + L F+ A+ L GG+ Sbjct: 21 VDRVLYHEKTDHQDLIIFENDALGRVMALDGVVQTTERDEFIYHEMLTHVPLLSHGNAKRVLIIGGGDGGMLREVSRHHGVEHITMVEIDAGVVEFCRQYLPNHSAGSYDDPRFNLVIDDGVNFVRQC-SDKFDVIISDCTDPIGPGESLFTSDFYQGCARCLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_EUBE2 (Spermidine synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=speE PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.043e-19 Identity = 60/183 (32.79%), Postives = 89/183 (48.63%), Query Frame = 1 Query: 214 WPGEAHS------LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVL 639 W E HS ++V++ LF G+S+YQ + VF+S +GK L L+G V +E+D Y EM+ H+P+ P K V ++YFPE A G ED RV ++ DA+ FLR + YD II D++DP G ++ L + F+ KAL+ G+L Sbjct: 4 WFSELHSPHVKFDIRVEKQLFSGESDYQRIDVFQSPEFGKFLTLNGSVIFSEQDCFIYNEMVVHVPMSVHPDVKNVLIIGGGDGGVSKELLQYDNIENIDIVEQDNMFVDVCREYFPETASGLEDERVHIYNSDALRFLRS-KQDMYDLIINDATDPFGASEGLFTREFYGNCYKALKEDGIL 185
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_CLOAB (Spermidine synthase OS=Clostridium acetobutylicum GN=speE PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.043e-19 Identity = 57/191 (29.84%), Postives = 88/191 (46.07%), Query Frame = 1 Query: 211 MWPGEAH------SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFE-DPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES 657 +W E+H S++VKE L+ K+ +Q++ F+S +G LDG + +TEKDE Y EMI H+P+ P K V +KY + + + D R+ +H D EF+++ G YD I+VDS+DP+GP + L F+ + L G+L N ES Sbjct: 4 LWYSESHADDTKFSIRVKEHLYSEKTPFQQIDFFKSETFGTFFTLDGYIMMTEKDEFIYHEMITHVPMAVNPKIKKVLIVGGGDGGTSREILRYNTIEKVDMVEIDERVVRLCQKYLTQTSCKLDNDSRLTMHFEDGKEFVKRAETGFYDLILVDSTDPIGPGEGLFTNEFYRDCERILSDDGILINQHES 194
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_YERPY (Spermidine synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=speE PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19 Identity = 52/168 (30.95%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V+ +L++ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K V ++Y P + G ++DPR +L I D V F+ Q ++D II D +DP+GP + L F++ A++L GG+ Sbjct: 21 VENVLYREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTE-KFDVIISDCTDPIGPGESLFTSVFYEGCARSLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_YERPS (Spermidine synthase OS=Yersinia pseudotuberculosis GN=speE PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19 Identity = 52/168 (30.95%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V+ +L++ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K V ++Y P + G ++DPR +L I D V F+ Q ++D II D +DP+GP + L F++ A++L GG+ Sbjct: 21 VENVLYREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTE-KFDVIISDCTDPIGPGESLFTSVFYEGCARSLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_YERPB (Spermidine synthase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=speE PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19 Identity = 52/168 (30.95%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V+ +L++ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K V ++Y P + G ++DPR +L I D V F+ Q ++D II D +DP+GP + L F++ A++L GG+ Sbjct: 21 VENVLYREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTE-KFDVIISDCTDPIGPGESLFTSVFYEGCARSLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_YERP3 (Spermidine synthase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=speE PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19 Identity = 52/168 (30.95%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V+ +L++ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K V ++Y P + G ++DPR +L I D V F+ Q ++D II D +DP+GP + L F++ A++L GG+ Sbjct: 21 VENVLYREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYLPNHSAGAYDDPRFKLVIDDGVNFVNQTTE-KFDVIISDCTDPIGPGESLFTSVFYEGCARSLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_SERP5 (Spermidine synthase OS=Serratia proteamaculans (strain 568) GN=speE PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.123e-18 Identity = 52/168 (30.95%), Postives = 85/168 (50.60%), Query Frame = 1 Query: 241 VKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVG-FEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGV 636 V+ +L++ K+E+Q++++FE+ G+V+ LDG+VQ TE+DE Y EM+ H+PL + K V ++Y P G ++DPR +L I D V F+ Q ++D II D +DP+GP + L F++ A+ L GG+ Sbjct: 21 VENVLYREKTEHQDLVIFENPVLGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHQGVEQITMVEIDAGVVEFCRQYLPNHNAGAYDDPRFKLVIDDGVNFVNQTDE-KFDVIISDCTDPIGPGESLFTSAFYEGCARCLNEGGI 187
BLAST of FC931395 vs. ExPASy Swiss-Prot
Match: SPEE_SYNP6 (Spermidine synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=speE PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.467e-18 Identity = 57/211 (27.01%), Postives = 96/211 (45.50%), Query Frame = 1 Query: 208 PMWPGEAHSLKVK-----EILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTV-----------------------------------SKKYFPELAVGFEDPRVRLHIGDAVEFLRQVPRGEYDAIIVDSSDPVGPAQELVEKPFFDTIAKALRPGGVLCNMAES----MWLHTHLIEDMISICRE 708 P+W E +V+ +IL++ S +Q++ + ++ YG+ L+LD E+ E Y E + H PL + S V S++Y + + DPR+ + IGD + F++ P YD I+VD SDP GPA L + F++ + L+PGGV + AES + +H +IE + ++ E Sbjct: 6 PVWIDEVFEDRVRYGLRGQILWEETSPFQKITIVDTEHYGRGLLLDDCWMTAERCEVCYHEYLVHPPLTTAASIARVLVIGGGDGGTVREVLRYAEVEQVDLVEIDGRVVELSQEYLGAIGTAWADPRLNVKIGDGIAFVQTAPDASYDVILVDGSDPAGPAAGLFNREFYENCRRVLKPGGVFASQAESPDSFLAVHLEMIETLSAVFAE 216 The following BLAST results are available for this feature:
BLAST of FC931395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931395 ID=FC931395; Name=FC931395; organism=Citrus clementina; type=EST; length=712bpback to top |