FC931408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.552e-47 Identity = 106/236 (44.92%), Postives = 140/236 (59.32%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDP--DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVKAIEDT-GDNILLFETPETMDRDNS 694 E YLK ++L+ +PN G ++ CNSW+++ + K R+FF N YLPS+TP L +YR EEL +RG+G GERK +DRIYDYDVYNDLG+PD + ARPVLGG PYPRR RTGR + D SEK Y+PRDEAF +K F A + SV ++P L AF L F F+ + L+ GV LP F + + P ++K I T G+ L + P+ M D S Sbjct: 120 EFYLKSLILEDIPNHGTIHFVCNSWVYNSKNYKTDRIFFANNTYLPSETPAPLLKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGNPDSGDKYARPVLGGSALPYPRRERTGRGKTRKDPNSEKPSDFVYLPRDEAFGHLKSSDFLAYGIKSVSQDVLPVLTDAFDGNILSLEFDNFAEVHKLYEGGVTLP----TNFLSKIAPIPVIKEIFRTDGEQFLKYPPPKVMQVDKS 351
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46 Identity = 101/244 (41.39%), Postives = 146/244 (59.84%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSE---KREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLK-QEGFWNTLLPRLVKAIEDTGDNILLFETPETMD-------RDNSFG 700 E+ L +I+++ + + N+W+HSK+DN Q R+ F ++ LPS+TPDG+K R ++L +RG+G+GERK ++RIYDYDVYNDLGDP +K E RPVLG + PYPRRCRTGRP D E K + FYVPRDE F E+K+ TF A ++ H LVPS+ A + D+ F FS ID L+ + L + ++ + + I + + +L ++TP + RDN FG Sbjct: 179 EICLSEIIIEDSTD-TILFPANTWIHSKNDNPQARIIFRSQPCLPSETPDGIKELREKDLVSVRGDGKGERKPHERIYDYDVYNDLGDP-RKTERVRPVLGVPETPYPRRCRTGRPLVSKDPPCESRGKEKEEFYVPRDEVFEEIKRDTFRAGRFKALFHNLVPSIAAALSNLDIPFTCFSDIDNLYKSNIVLGHTEPKDTGLGGFIGGFMNGILNVTETLLKYDTPAVIKWDRFAWLRDNEFG 420
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46 Identity = 106/227 (46.70%), Postives = 135/227 (59.47%), Query Frame = 2 Query: 62 CNSWLHSKHDNKQKRVFF-TNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEK---REGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDL--GFPYFSAIDALFNEGVNLPPLKQEG-----FWNTLLPRLVKAIEDTG-------DNILLFETPETMDRD 688 C SW+ H + KR FF K Y+PSQTP G+++ R EL LRGNG GERK +DRIYDYDVYNDLG KPE RPVLGGK++PYPRRCRTGRPR TD SE+ ++G YVPRDE F+E K+ F K + S LH L L+ V+ D+ FP ++IDAL+++ P++ EG + L LV ++ G + FETPE D D Sbjct: 201 CQSWIDPSHCSPDKRTFFPVEKSYIPSQTPKGVEKLRKSELEALRGNGCGERKKHDRIYDYDVYNDLG----KPESKRPVLGGKEHPYPRRCRTGRPRSKTDPSSEEESHKKGEMYVPRDETFTERKEQAFLTKQLLSQLHGLCTGLK---VNKDILPSFPTLASIDALYDDDFRNQPVQPEGGKVRLILDLLAKELVHLVKLEGAEFVEGIRRVFKFETPEIHDMD 420
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.992e-44 Identity = 105/235 (44.68%), Postives = 135/235 (57.45%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-----FPYFSAIDALFNEGVNLPPLKQEGFWNTL--LPRLVKAIEDTGDNILLFETPETM 679 E +LK + L+ +PN G + CNSW+++ K R+FF NK YLPS+TP L +YR EEL LRG+G GERK ++RIYDYDVYNDLG+PD LARP+LGG +PYPRR RTGR D SEK YVPRDE F +K F A + SV +VP+ E+AF DL F F + LF G+ LP +TL LP + + G+ +L F P + Sbjct: 132 EFFLKSLTLEDVPNHGTIRFVCNSWVYNSKLYKSPRIFFANKSYLPSETPSPLVKYREEELQTLRGDGTGERKLHERIYDYDVYNDLGNPDHGEHLARPILGGSSTHPYPRRGRTGRYPTRKDPNSEKPATETYVPRDENFGHLKSSDFLAYGIKSVSQCVVPAFESAF---DLNFTPNEFDSFQDVRNLFEGGIKLP----LDVISTLSPLPVVKEIFRTDGEQVLKFTPPHVI 359
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.437e-44 Identity = 102/238 (42.86%), Postives = 135/238 (56.72%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDL---GFPYFSAIDALFNEGVNLPP--LKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDNS 694 E +L + LD +PN G + CNSW+++ +K R+FF N+ YLPS+TP L YR EEL LRG+G GERK ++RIYDYDVYNDLG+PD ARPVLGG + PYPRR RTGR D SE R Y+PRDEAF +K F + +V +VP+LE+ F D + F F + L+ G+ LP L Q + LP L + G+N L + P+ + S Sbjct: 127 EFFLVSLTLDDIPNHGSIYFVCNSWIYNAKHHKIDRIFFANQTYLPSETPAPLVHYREEELNNLRGDGTGERKEWERIYDYDVYNDLGNPDSGENHARPVLGGSETYPYPRRGRTGRKPTRKDPNSESRSDYVYLPRDEAFGHLKSSDFLTYGLKAVSQNVVPALESVFFDLNFTPNEFDSFDEVHGLYEGGIKLPTNILSQ----ISPLPVLKEIFRTDGENTLKYPPPKVIQVSRS 360
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.756e-43 Identity = 101/238 (42.44%), Postives = 135/238 (56.72%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-----FPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDNS 694 E +L + L+ +PN G ++ CNSW+++ K R+FF N+ YLPS+TP L +YR EEL LRG+G GERK ++R+YDYDVYNDLGDPDK ARPVLGG PYPRR RTGR D SE R + Y+PRDEAF +K F + SV ++P L++AF DL F F + L++ G+ LP + LP L + G+ L F P+ + S Sbjct: 124 EFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNLRGDGTGERKEWERVYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDPNSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAF---DLNFTPREFDSFDEVHGLYSGGIKLPTDIISKI--SPLPVLKEIFRTDGEQALKFPPPKVIQVSKS 356
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.427e-42 Identity = 99/236 (41.95%), Postives = 131/236 (55.51%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAID---ALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDNS 694 E +L + LD +PN G + CNSW+++ + R+FF NK YLPS TP L YR EEL LRG+G GER+ +DRIYDYDVYNDLG PD+K L RPVLGG PYPRR RTGR + + SE R Y+PRDEAF VK F + S +VP L + V L P F+ + +L++ G+ LP + +P + G+ L F P+ + D+S Sbjct: 132 EFFLVSLTLDDVPNVGSIKFACNSWIYNDKKYQSDRIFFANKTYLPSATPAPLVSYRQEELKTLRGDGTGERQEWDRIYDYDVYNDLGAPDQKATLGRPVLGGSSTLPYPRRGRTGRKKTVKEPQSESRSDTVYLPRDEAFGHVKSSDFLVYILKSASQNIVPQLRSV-VTLQLNNPEFNTFEDVRSLYDGGIKLPTDVLSKI--SPIPLFSELFRSDGEAALKFPPPKVIQVDHS 364
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 2.435e-42 Identity = 102/237 (43.04%), Postives = 134/237 (56.54%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVKAIEDT-GDNILLFETPETMDRDNS 694 E +LK + L+ + N G + CNSW+++ K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K S+ + P+ E+AF + F F + L+ G+ LP +T++P ++K + T G +IL F P + S Sbjct: 106 EFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQS 338
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.180e-42 Identity = 97/232 (41.81%), Postives = 132/232 (56.90%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKR-----EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLP--PLKQEGFWNTLLPRLVKAIEDTGDNILLFETP 670 E +LK + L+ +PN G V+ CNSW++ K R+FF N+ YLPS+TP+ L++YR EL LRG+G G+R+ +DRIYDYDVYNDLG+PD+ E R LGG + PYPRR RTGRP TD SE R + YVPRDE F +K F + S++ ++P L F F F + L+ G+ LP PL + L + + + G+ IL F TP Sbjct: 120 EFFLKSLTLEDVPNHGKVHFVCNSWVYPSFRYKSDRIFFANQPYLPSETPELLRKYRENELVTLRGDGTGKREAWDRIYDYDVYNDLGNPDQGKENVRTTLGGSADYPYPRRGRTGRPPTRTDPKSESRIPLILSLDIYVPRDERFGHLKMSDFLTYALKSIVQFILPELHALFDGTPNEFDSFEDVLRLYEGGIKLPQGPLFKALTDAIPLEMIRELLRTDGEGILRFPTP 351
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.180e-42 Identity = 96/232 (41.38%), Postives = 133/232 (57.33%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGK-QNPYPRRCRTGRPRCDTDQFSEKR-----EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLP--PLKQEGFWNTLLPRLVKAIEDTGDNILLFETP 670 E +LK + L+ +PN G V+ CNSW++ + K R+FF N+ YLPS+TP+ L++YR EL LRG+G G+R+ +DRIYDYD+YNDLG+PD+ E R LGG + PYPRR RTGRP TD SE R + YVPRDE F +K F + S++ ++P L F F F + L+ G+ LP PL + L + + + G+ IL F TP Sbjct: 121 EFFLKSLTLEDVPNHGKVHFVCNSWVYPSLNYKSDRIFFANQPYLPSETPELLRKYRENELLTLRGDGTGKREAWDRIYDYDIYNDLGNPDQGKENVRTTLGGSAEYPYPRRGRTGRPPTRTDPKSESRIPLILSLDIYVPRDERFGHLKMSDFLTYALKSIVQFILPELHALFDGTPNEFDSFEDVLRLYEGGIKLPQGPLFKALTAAIPLEMIRELLRTDGEGILRFPTP 352 The following BLAST results are available for this feature:
BLAST of FC931408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931408 ID=FC931408; Name=FC931408; organism=Citrus clementina; type=EST; length=700bpback to top |