FC931408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.084e-42 Identity = 99/230 (43.04%), Postives = 131/230 (56.96%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVD---PDLGFPYFSAIDALFNEGVNLPP--LKQEGFWNTLLPRLVKAIEDTGDNILLFETP 670 E +L + L+ +PN G + CNSW+++ K+ R+FF N YLPS TP L +YR EEL +LRG+G G+RK +DRIYDYDVYNDLG+PD RP+LGG PYPRR RTGR R TD SEK G YVPRDE F +K F + S+ H ++P ++A F F + +L+ G+ LP L Q + LP L + G+N+L F P Sbjct: 132 EFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTYLPSATPAPLLKYRKEELEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGD--PRPILGGSSIYPYPRRVRTGRERTRTDPNSEK-PGEVYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQ----ISPLPALKEIFRTDGENVLQFPPP 354
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.084e-42 Identity = 104/240 (43.33%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-----FPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVKAIEDT-GDNILLFETPETMDRDNS 694 E YLK + L+ +PN G + CNSW+++ K R+FF N Y+PS+TP L YR EEL LRG+G+GERK +DRIYDYDVYNDLG+PD ARP+LGG +PYPRR RTGR DQ SEK G YVPRDE F +K F A + S+ ++P+ E+ F DL F F + L G+ LP +T++P +VK + T G+ +L F P + S Sbjct: 136 EFYLKSLTLEDVPNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAALVGYREEELKNLRGDGKGERKEHDRIYDYDVYNDLGNPDHGENFARPILGGSSTHPYPRRGRTGRYPTRKDQNSEK-PGEVYVPRDENFGHLKSSDFLAYGIKSLSQYVLPAFESVF---DLNFTPNEFDSFQDVRDLHEGGIKLP----TEVISTIMPLPVVKELFRTDGEQVLKFPPPHVIQVSKS 367
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.061e-41 Identity = 95/244 (38.93%), Postives = 137/244 (56.15%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREG-----NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFW-----NTLLPRLVKAIEDT-GDNILLFETPETMDRDNS 694 E +LK + L+ +PN G ++ CNSW++ K R+FF N+ YLPS+TP L++YR EL LRG+G G+ + +DR+YDY YNDLG+PDK E ARP+LGG + PYPRR RTGR D E R + YVPRDE F VK+ F ++ S L L+P+ + + F F+ + L+ G+ LP EG W + + ++K I T G +L + TP+ + D + Sbjct: 119 EFFLKSLTLEDVPNYGKIHFVCNSWVYPAFRYKSDRIFFANQAYLPSETPQPLRKYRENELVALRGDGTGKLEEWDRVYDYACYNDLGEPDKGEEYARPILGGSSEYPYPRRGRTGREPTKADPNCESRNPLPMSLDIYVPRDERFGHVKKSDFLTSSLKSSLQTLLPAFKALCDNTPNEFNSFADVLNLYEGGIKLP----EGPWLKAITDNISSEILKDILQTDGQGLLKYPTPQVIQGDKT 358
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.023e-40 Identity = 93/228 (40.79%), Postives = 129/228 (56.58%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETM 679 E +L + L+ +PN G ++ CNSW+++ K+ R+FF NK YLP++TP L +YR EEL LRG+G GERK YDRIYDY VYNDLG+PDK LAR LGG + PYPRR RTGR D E + Y+PRDE F +K F + S+ ++P+ + AF + F F + LF G+ LP + +P L + + G+ +L F P + Sbjct: 132 EFFLVSLTLEDIPNHGTIHFVCNSWVYNAKSYKRDRIFFANKTYLPNETPASLVKYRKEELENLRGDGTGERKEYDRIYDYAVYNDLGNPDKNKNLARTTLGGSSDFPYPRRGRTGRKSTRKDPKCEIPTSDTYIPRDENFGHLKSGDFLTYAIKSLTQNVLPTFQKAF-GFNNEFDTFEDVRGLFEGGLYLPTDVISKI--SPIPVLKEILRTDGEQVLKFPPPHVI 356
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.477e-39 Identity = 97/240 (40.42%), Postives = 127/240 (52.92%), Query Frame = 2 Query: 2 EMYLKDIVLDGLP-NGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKR-----EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLP--PLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDNS 694 E LK + L+ +P +G V+ CNSW++ RVFF+NK YLP +TP L +YR EEL LRG G+GE K +DR+YDY YNDLG P K P RPVLGG Q PYPRR RTGR D +E R + YVPRDE F +K F A + ++ + P+LE F D F F + ++ EG++LP L N L L + G L F P+ + D + Sbjct: 122 EFLLKSLTLEDVPGHGRVHYICNSWIYPAKHYTTDRVFFSNKTYLPHETPATLLKYREEELVSLRGTGEGELKEWDRVYDYAYYNDLGVPPKNP---RPVLGGTQEYPYPRRGRTGRKPTKEDPQTESRLPITSSLDIYVPRDERFGHLKMSDFLAYALKAIAQFIQPALEAVFDDTPKEFDSFEDVLKIYEEGIDLPNQALIDSIVKNIPLEMLKEIFRTDGQKFLKFPVPQVIKEDKT 358
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 2.786e-38 Identity = 96/244 (39.34%), Postives = 129/244 (52.87%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPNGPVNVT-----CNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQ-GERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGK-QNPYPRRCRTGRPRCDTDQFSEKREG----NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLP--RLVKAIEDTGDNILLFETPETMDRDNS 694 + YLK + L G P+G T CNSW++ H + RVFF+NK YLPS+TP+ +K R EEL LRGN + GE K +DR+YDY YNDLG PDK P+ RPVLGG + PYPRR +TGR +D SE R N YVPRDE FS VK F A + SV LVP + + F F + L++ + L ++P + + + G+ L + P+ + S Sbjct: 137 QFYLKSLTLRGFPDGEGGATAIHFICNSWIYPNHRYRSDRVFFSNKAYLPSETPELIKELREEELKNLRGNEKGGEFKEWDRVYDYAYYNDLGAPDKGPDSVRPVLGGSPELPYPRRGKTGRKSTKSDPKSESRLALLNLNIYVPRDERFSHVKFSDFLAYALKSVTQVLVPEIASVCDKTINEFDSFEDVFHLYDGSIKLANGHTISKLRDVIPWEMFRELVRNDGERFLKYPLPDILKESRS 380
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.862e-37 Identity = 95/238 (39.92%), Postives = 128/238 (53.78%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQ-GERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKR----EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVKA-IEDTGDNILLFETPETMDRD 688 E +LK + LDG+P G V NSW++ + + +RVFF N YLPS+ P L YR EEL ILRG+G+ G K +DRIY YD YNDLG PDK +L RPVLGG Q PYPRR RTGR TD +E R + N YVPRDE F +K F ++ +++ ++P + T F F I L+ G+ + +P L+K+ + GD +L P + D Sbjct: 126 EFFLKTLTLDGVPGKGTVVFVANSWIYPADNYQYERVFFANDTYLPSKMPAPLIPYRQEELNILRGDGKIGPYKEHDRIYRYDYYNDLGQPDKGSKLVRPVLGGSQELPYPRRGRTGRAPTKTDPNTESRLPLLDLNIYVPRDERFGHLKMSDFLGYSLKAIVEGVLPIIRTYVDTTPKEFDSFQDIMELYEGGLKVANASALAEIKKRVPFELIKSLLPVAGDQVLKLPLPHVIKED 363
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.163e-34 Identity = 97/239 (40.59%), Postives = 125/239 (52.30%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPN--GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNG-QGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGK-QNPYPRRCRTGRPRCDTDQFSEKREG---NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-FPYFSAIDALFNEGVNLP--PLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRD 688 E +LK I LD +P G V NSW++ + RVFF N YLPSQ P LK YR +EL LRG+ QG + +DR+Y YDVYNDLG PD RP+LGG PYPRR RTGR TD SE R YVPRDE F +K F ++ ++ +VP++ T +VD G F F I L+ G+ LP P +E L + + GD IL P+ + +D Sbjct: 121 EFFLKTITLDDVPGRAGAVVFLANSWVYPADKYRYDRVFFANDAYLPSQMPAALKPYRDDELRNLRGDDQQGPYEEHDRVYRYDVYNDLGSPDSGN--PRPILGGSPDTPYPRRGRTGRKPTTTDPDSESRLSLVEQIYVPRDERFGHLKMADFLGYSIKAIAEGIVPAIRT-YVDTTPGEFDSFQDILDLYEGGLKLPDVPALEELRKRFPLQLVKDLLPAAGDYILKLPMPQIIKQD 356
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33 Identity = 97/238 (40.76%), Postives = 128/238 (53.78%), Query Frame = 2 Query: 2 EMYLKDIVLDGLP-NGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNG-QGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGK-QNPYPRRCRTGRPRCDTDQFSEKREG---NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-FPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVK-AIEDTGDNILLFETPETMDRD 688 E +LK I LD +P +G V NSW++ + RVFF+N LPS+ P LK YR +EL LRG+ QG + +DR+Y YDVYNDLG+PD RPVLGG PYPRR RTGR TD +E R N YVPRDE F +K F ++ +++ +VP++ T +VD G F F I L+ G+ LP + P +LVK I GD +L P + D Sbjct: 119 EFFLKTITLDNVPGHGAVVFVANSWIYPASKYRYNRVFFSNDTSLPSKMPAALKPYRDDELRNLRGDDQQGPYQEHDRVYRYDVYNDLGEPDSGN--PRPVLGGSPDRPYPRRGRTGRKPTKTDPTAESRLSLLENIYVPRDERFGHLKMADFLGYSIKALVDGIVPAIRT-YVDLTPGEFDSFKDILKLYEGGLKLPSIPALEELRKRFPLQLVKDLIPAGGDYLLKLPMPHVIRED 353
BLAST of FC931408 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.646e-32 Identity = 91/233 (39.06%), Postives = 129/233 (55.36%), Query Frame = 2 Query: 2 EMYLKDIVLDGLPNGPVNV-TCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRG-NGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREG---NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-FPYFSAIDALFNEGVNLPPLKQ-EGFWNTLLPRLVKAIEDTGDNILL-FETPE 673 + +LK I L +P V NSW++ R+FF N YLPSQ P+ L+ YR +EL LRG + QG + +DRIY YDVYNDLG+PD+ + RPVLGG Q +PYPRR RTGR D SE R YVP DE F+ +K F+ ++ +++ ++P++ T +VD G F F I L+ G+ LP + E + +L+K + G + LL F P+ Sbjct: 119 KFFLKTITLHDVPGCDTIVFVANSWIYPVGKYHYNRIFFANNSYLPSQMPEALRPYREDELRYLRGEDRQGPYQEHDRIYRYDVYNDLGEPDR--DNPRPVLGGSQKHPYPRRGRTGRIPTKKDPNSESRLSLLEQIYVPSDERFAHLKMSDFAGYSIKAIVQGILPAIRT-YVDLTPGEFDSFEDILKLYRGGLKLPSIPALEELRKSFPVQLIKDLLPVGGSYLLKFPKPD 348 The following BLAST results are available for this feature:
BLAST of FC931408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931408 ID=FC931408; Name=FC931408; organism=Citrus clementina; type=EST; length=700bpback to top |