FC931413

Overview
NameFC931413
Unique NameFC931413
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6173 contig Ccv1_Contig6173:447..1159. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931413 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 264.618 bits (675), Expect = 3.679e-70
Identity = 134/218 (61.47%), Postives = 156/218 (71.56%), Query Frame = 1
Query:   10 QGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGPVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE-APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVXVQANSEATLGTY 660
            QGLDGL++RC +Y + G  F KWRAVL+I    PS LAI ENAN LARYA ICQ+NG VPIVEPE+L DG HD+  C  V+E+VLAA YKALNDHHV LEGTLLKPNMVT G     K TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N+    +PW LSFS+GRALQ S L AW GK  N +  Q AF+    AN +A  G Y
Sbjct:  126 QGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSSLAIQENANALARYASICQQNGLVPIVEPEVLPDGDHDLEHCQYVSEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAMANCQAAQGQY 343          
BLAST of FC931413 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.679e-70
Identity = 136/219 (62.10%), Postives = 160/219 (73.06%), Query Frame = 1
Query:    7 TQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGPVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVXVQANSEATLGTY 660
            TQGLDGL++RC +Y + GA FAKWR+VLKI    PS+LAI ENAN LARYA ICQ+NG VPIVEPEIL DG HD+ +C  VTE+VLAACYKAL+DHHV LEGTLLKPNMVT G   P K + + IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLN++N     KPW L+FS+GRALQ S L AW G + N + A   F+   +AN  A  G Y
Sbjct:  125 TQGLDGLSERCAQYKKDGADFAKWRSVLKISDTTPSELAIMENANVLARYASICQQNGIVPIVEPEILPDGEHDLKRCQYVTEKVLAACYKALSDHHVYLEGTLLKPNMVTAGHSCPTKYSSEEIAMATVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKY 343          
BLAST of FC931413 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 264.233 bits (674), Expect = 4.805e-70
Identity = 136/218 (62.39%), Postives = 160/218 (73.39%), Query Frame = 1
Query:    7 TQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGPVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVXVQANSEATLGTY 660
            TQGLD LA RC +Y + G  FAKWR VLKIG N PS  +I ENAN LARYA ICQ    VPIVEPE+L DG HD+++   VTE VLAA YKAL+DHHV LEGTLLKPNMVT G  A K TP+ IA  TV+AL+RT+PAAV  V FLSGGQSEEEAT NL+A+N +   +PW+L+FS+GRALQ S L+AWAGK+EN+   Q   L   +AN +A  G Y
Sbjct:  125 TQGLDDLAARCAQYKKDGCDFAKWRCVLKIGKNTPSYQSILENANVLARYASICQSQRIVPIVEPEVLPDGDHDLDRAQKVTETVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSAKKNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKY 342          
BLAST of FC931413 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 8.197e-70
Identity = 134/220 (60.91%), Postives = 159/220 (72.27%), Query Frame = 1
Query:    7 TQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGPVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVXVQANSEATLGTYR 663
            TQGLDGL++RC +Y + G  FAKWR VLKI    P  LAI ENAN LARYA ICQ NG VPIVEPEIL DG HD+ +C   TE+VLAA YKAL+DHHV LEGTLLKPNMVTPG   P K TP  +A  TV AL+RT+PA+VP + FLSGGQSEEEA+ +LNA+NQ+   +PW L+FS+GRALQ S L AW GK+ N    Q  F+   + N  A+ G Y+
Sbjct:  125 TQGLDGLSERCAQYKKDGCDFAKWRCVLKISDGCPFALAIAENANVLARYASICQMNGLVPIVEPEILPDGDHDLQRCQYATEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHSCPKKFTPQEVAMATVTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYK 344          
BLAST of FC931413 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.063e-69
Identity = 135/219 (61.64%), Postives = 156/219 (71.23%), Query Frame = 1
Query:    7 TQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGPVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKV-TPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVXVQANSEATLGTY 660
            TQGLD LA RC +Y+  G RFAKWR VLKI  + PS LA+ ENAN LARYA ICQ+NG VPIVEPE+L DG HD+     VTE+VLA  YKAL DHHV LEGTLLKPNMVT G    K  TP   A  TVRALQRT+P AVP + FLSGGQSE +AT+NLN +N++   KPW+L+FSFGRALQ S L  W GK+ENV  AQ   L   +AN  A +G +
Sbjct:  125 TQGLDDLASRCAEYWRLGCRFAKWRCVLKISSHTPSYLAMLENANVLARYASICQQNGLVPIVEPEVLPDGDHDLLTAQRVTEQVLAFVYKALADHHVYLEGTLLKPNMVTAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKF 343          
BLAST of FC931413 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 9.063e-69
Identity = 132/218 (60.55%), Postives = 156/218 (71.56%), Query Frame = 1
Query:   10 QGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGPVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE-APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVXVQANSEATLGTY 660
            QGLDGL++RC +Y + G  F KWRAVL+I    PS LAI ENAN LARYA ICQ+NG VPIVEPE+L DG HD+  C  V+E+VLAA YKALNDHHV LEGTLLKPNM+T G     K TP+ +A  TV AL RT+PAAVP++ FLSGG SEE+AT NLNA+ +    +PW LSFS+GRALQ S L AW GK  N +  Q AF+    AN +A  G Y
Sbjct:  126 QGLDGLSERCAQYKKDGVDFGKWRAVLRISDQCPSSLAIQENANALARYASICQQNGLVPIVEPEVLPDGDHDLEHCQYVSEKVLAAVYKALNDHHVYLEGTLLKPNMLTAGHACTKKYTPEQVAMATVTALHRTVPAAVPSICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQY 343          
BLAST of FC931413 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.498e-68
Identity = 133/219 (60.73%), Postives = 158/219 (72.15%), Query Frame = 1
Query:    7 TQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGPVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPG-SEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVXVQANSEATLGTY 660
            TQGLD LA+R   + + G  FAKWR VL IG + PS L + ENAN LARYA ICQ NG VPIVEPE+L DG HD+ +   VTE+VLA  YKAL DHHV LEGTLLKPNMVTPG S A K + + I   TV AL+R +PAAVP + FLSGGQSE +AT NLNA+N ++  KPW L+FS+GRALQ S LKAW GK+EN+  AQ   L   +AN +A+LG Y
Sbjct:  128 TQGLDKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVEPEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQSSASKASHEAIGLATVTALRRGVPAAVPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKY 346          
BLAST of FC931413 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.498e-68
Identity = 133/221 (60.18%), Postives = 159/221 (71.95%), Query Frame = 1
Query:    7 TQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGPVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVXVQANSEATLGTYRV 666
            TQGLDGL++RC +Y + GA FAKWR V+KI    PS L I ENA  LARYA ICQ++G VPIVEPEIL DG H++ +C  VTERVLAA YKA+ DHHV LEGTLLKPNMVTPG   P K + + +A  TV AL+RT+P AV  V FLSGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+   + NS A+ G Y V
Sbjct:  125 TQGLDGLSERCAQYKKDGADFAKWRCVMKISETTPSNLCITENAKVLARYASICQQHGIVPIVEPEILPDGDHNLKRCQFVTERVLAAVYKAMFDHHVYLEGTLLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTV 345          
BLAST of FC931413 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.468e-66
Identity = 134/222 (60.36%), Postives = 163/222 (73.42%), Query Frame = 1
Query:    7 TQGLDGLAQRCQKYYEAGARFAKWRAVLKI--GPNEPSQLAINENANGLARYAIICQENGPVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE-APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVXVQANSEATLGTYR 663
            TQGLDGLA+RC++YY+AGARFAKWR VL I     +P+ L+I+E A GLARYA ICQ+N  VPIVEPEIL DGPH I  CA VT++VL+  +KAL ++ VLLEG LLKPNMVT G E   K T   +   TVR L+RT+P A+P VVFLSGGQSEEEA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L   +ANS AT G Y+
Sbjct:  130 TQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIHETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINAL-GPHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYK 350          
BLAST of FC931413 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.468e-66
Identity = 134/222 (60.36%), Postives = 163/222 (73.42%), Query Frame = 1
Query:    7 TQGLDGLAQRCQKYYEAGARFAKWRAVLKI--GPNEPSQLAINENANGLARYAIICQENGPVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSE-APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVXVQANSEATLGTYR 663
            TQGLDGLA+RC++YY+AGARFAKWR VL I     +P+ L+I+E A GLARYA ICQ+N  VPIVEPEIL DGPH I  CA VT++VL+  +KAL ++ VLLEG LLKPNMVT G E   K T   +   TVR L+RT+P A+P VVFLSGGQSEEEA+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L   +ANS AT G Y+
Sbjct:  130 TQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIHETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINAL-GPHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYK 350          
The following BLAST results are available for this feature:
BLAST of FC931413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOB_MOUSE3.679e-7061.47Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALDCB_DANRE3.679e-7062.10Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALF_DROME4.805e-7062.39Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALDOB_SPAAU8.197e-7060.91Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALF_SCHMA9.063e-6961.64Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALDOB_RAT9.063e-6960.55Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALF2_CAEEL4.498e-6860.73Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALDCA_DANRE4.498e-6860.18Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF_PLAFA2.468e-6660.36Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF72.468e-6660.36Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104H02EF PostHarvP1 Citrus clementina cDNA clone C34104H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931413 ID=FC931413; Name=FC931413; organism=Citrus clementina; type=EST; length=711bp
GACCCCACCCAGGGTCTTGATGGCCTCGCCCAGCGCTGCCAGAAATACTA
TGAAGCTGGTGCTCGTTTTGCCAAATGGCGTGCTGTTCTTAAGATTGGCC
CTAATGAGCCTTCGCAGCTGGCCATCAATGAGAATGCCAATGGCCTGGCC
CGATATGCTATCATCTGCCAGGAGAATGGCCCTGTTCCCATTGTTGAACC
TGAGATCCTTGTTGACGGTCCCCATGACATCAACAAGTGTGCTGATGTGA
CCGAGCGTGTTCTTGCAGCATGCTACAAGGCTCTGAATGACCACCATGTC
CTTCTTGAGGGTACCCTTTTGAAGCCCAACATGGTGACCCCTGGATCTGA
AGCTCCCAAAGTTACACCGGACGTGATCGCTGAACACACTGTCCGGGCCC
TGCAACGCACTATGCCTGCAGCAGTTCCTGCTGTTGTGTTCTTGTCTGGT
GGGCAGAGTGAGGAGGAGGCTACCCGCAACCTTAATGCCATGAACCAGCT
CAAGACGAAGAAGCCATGGTCACTTTCCTTCTCCTTTGGACGTGCACTTC
AGCAGAGCACTCTCAAGGCATGGGCTGGAAAGGAAGAGAATGTGCAGAAG
GCCCAGGCTGCTTTCCTTGTCNAGGTGCAGGCCAACTCTGAGGCTACCCT
CGGTACTTACAGGGTGATGCCCAGCTTGGTGAAGGTGCCGCAGAGTCTCT
CCATGTCAGGA
back to top