FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 72/110 (65.45%), Postives = 81/110 (73.64%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQ SFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT KVV Y TAK FAD +GIPF+ETSAK++T VEQ+FM MAA IK RM + A V+I+ PV Q G C Sbjct: 95 DQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33 Identity = 71/111 (63.96%), Postives = 85/111 (76.58%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPV-AQKSGCC 331 DQESFNNVKQWL EIDRYAS+NVNKLLVGNK DLT KVV + TAK +AD++GIPF+ETSAK++T VEQAFM MAA IK+RM + ++++P PV A K GCC Sbjct: 95 DQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDSKPSVKINSSTPVSANKGGCC 205
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32 Identity = 68/111 (61.26%), Postives = 87/111 (78.38%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMN-NARPPTVQIKGQPVAQKSGCC 331 + ESFNNVKQWL+EIDRYA+++V KLL+GNK D+ +KVVS ET +A ADE+GIPF+ETSAKDS VEQAF+ +A IK +M SQ + N + P TVQ+KGQP+ Q +G C Sbjct: 92 EMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQMKGQPIQQNNGGC 202
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.272e-31 Identity = 70/110 (63.64%), Postives = 79/110 (71.82%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK FAD +GIPF+ETSAK++T VEQAFM MAA IK RM + R P ++I PV Q G C Sbjct: 92 DQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKQAGGGC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.272e-31 Identity = 70/110 (63.64%), Postives = 79/110 (71.82%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK FAD +GIPF+ETSAK++T VEQAFM MAA IK RM + R P ++I PV Q G C Sbjct: 92 DQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKQAGGGC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 5.579e-31 Identity = 67/117 (57.26%), Postives = 87/117 (74.36%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASI-KDRMASQPSMNNARPPTVQIKGQPVAQK----SGCCST 337 D ESFNNVKQWL+EIDRYA+D+V KLLVGNKCDL N+ V A+A+A E+GIPF+ETSAK+S VE+AF+AM+A+I K + SQ ++ VQ+KG+P+ Q+ S CCST Sbjct: 92 DMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALERKPSNVVQMKGRPIQQEQQKSSRCCST 208
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.287e-31 Identity = 69/110 (62.73%), Postives = 79/110 (71.82%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK FAD +G+PF+ETSAK++T VEQAFM MAA IK RM + R P ++I PV SG C Sbjct: 92 DQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKSASGGC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.517e-31 Identity = 69/110 (62.73%), Postives = 79/110 (71.82%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK FAD +G+PF+ETSAK++T VEQAFM MAA IK RM + R P ++I PV SG C Sbjct: 92 DQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPASGGC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.243e-30 Identity = 67/111 (60.36%), Postives = 81/111 (72.97%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRM-ASQPSMNNARPPTVQIKGQPVAQKSGCC 331 D+ +F NV+QWL EIDR+A +NVNKLLVGNK DL A KVV + TAKAFAD + IPF+ETSAK ST VEQAFM MA IK+R+ ASQP+ + V P++ KSGCC Sbjct: 92 DKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTVDKNKVVPGSSAPISPKSGCC 202
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.120e-30 Identity = 69/110 (62.73%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK FAD +GIPF+ETSAK++T VEQAFM MAA IK RM + R P ++I PV G C Sbjct: 92 DQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |