FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.120e-30 Identity = 69/110 (62.73%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK FAD +GIPF+ETSAK++T VEQAFM MAA IK RM + R P ++I PV G C Sbjct: 92 DQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.169e-30 Identity = 68/110 (61.82%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 D+ES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK FAD +GIPF+ETSAK++T VEQAFM MAA IK RM + R P ++I PV G C Sbjct: 92 DRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.057e-30 Identity = 65/112 (58.04%), Postives = 79/112 (70.54%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKS--GCC 331 D +SFNNVKQWL EIDRYA++ VNKLLVGNK D+T KVV Y AK FAD +GIPF+ETSAK+++ VEQAF+ MA IK+RM S + NN + G V+ S GCC Sbjct: 92 DMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNNTKASVNVSPGHGVSNNSSGGCC 203
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.344e-29 Identity = 67/110 (60.91%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQES+ NVKQWL EIDR+AS+NVNKLLVGNK DLT KVV TAK FAD +GIPF+ETSAK++T VEQAFM MAA IK +M + R P ++I PV G C Sbjct: 92 DQESYANVKQWLQEIDRHASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQMGPGAASGGER-PNLKIDSTPVKPAGGGC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.519e-28 Identity = 66/110 (60.00%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQESFNNVKQWL+EIDRYA +NVNKLLVGNK DLTA +VVS + AK FA+ +GI F+ETSAK++ VE+AFM MAA IK RMA+ P A + P S CC Sbjct: 92 DQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAPKAGVKLTPGQQVPSNGGSKCC 201
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.774e-28 Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQP-SMNNARPPTVQIKGQPVAQKSGCC 331 DQ+SFNNVKQWL EIDRYA + VN+LLVGNK D+ KVV Y AK FAD + IPF+ETSAKDST VEQAF+ M+ IK+RM + + +NA+ +G V+Q S C Sbjct: 92 DQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKVGQGTNVSQSSSNC 202
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25 Identity = 62/115 (53.91%), Postives = 73/115 (63.48%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPP-----TVQIKGQPVAQKSGCC 331 DQESFN VK WL EIDRYA+ V KLLVGNKCDL +VV Y+ AK FAD +PF+ETSA DST VE AF+ MA IK+ M SQ ++N V +KGQ + G C Sbjct: 92 DQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESM-SQQNLNETTQKKEDKGNVNLKGQSLTNTGGGC 205
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25 Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSG 325 DQ+SF NVKQW+ EIDRYA +NVNKLLVGNK DL KVV AK+FA+ GIPF+ETSAK++T VE+ F++MA IK+R+A +P V IK + + G Sbjct: 94 DQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLAD--IQETPKPDEVDIKSKNKTKSGG 199
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24 Identity = 57/112 (50.89%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKG---QPVAQKSGC 328 D SFNNVKQW+ EI RYA D+V +LLVGNKCDL K+V TA+ +AD +GIPF+ETSAK S VEQAFM MA+ IK NN+ +K P+ +K C Sbjct: 92 DHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKKLQGGIQPNNNSTYNAHVVKPTGFTPIGKKKKC 203
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 D++SF +++ W+ I+++ASD+VNK+L+GNKCD+T KVV K+ ADE GI F+ETSAK+S VE+AF+ +A IK RM P+ P I P +K+ CC Sbjct: 99 DEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDTPN-----DPDHTICITPNNKKNTCC 203 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |