FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RABG1_DICDI (Ras-related protein RabG1 OS=Dictyostelium discoideum GN=rabG1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQ-IKGQPVAQKSGCC 331 DQ ++NNV W+ EI RY V+++LVGNKCDL K+V+ A+ +AD +GIPF+ETSA VE+AFMAMA I + + ++P V+ + G P K C Sbjct: 91 DQLTYNNVGLWMQEIQRYGVLGVSRVLVGNKCDLEDRKLVNASIAQEYADILGIPFIETSATTGVNVEEAFMAMADEI-----YRNHIGGSKPSVVKPVCGSPPRTKKNIC 196
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16 Identity = 46/113 (40.71%), Postives = 68/113 (60.18%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQK--SGCCS 334 ++ SF+N++ WL EI YA +V +L+GNK D+++ +V+ E + A E G+PF+ETSAK VE AF+A+A +K R Q A P+ QI+ +QK S CCS Sbjct: 114 NKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQ-----ADEPSFQIRDYVESQKKRSSCCS 221
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIK 298 D++SF N++ W+ I AS V +LL+GNKCD+ A + V E A A E GI F ETSAK S V++AF ++A I + + NN +PP+ +K Sbjct: 92 DEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKNNNKPPSTDLK 190
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 36/102 (35.29%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQP 307 +++SF+N+K W+ I+ +AS +V ++++GNKCD+ + VS E + A + GI F+ETSAK S VE+AF+ +A I ++ + + N+ + ++K P Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNKKMNENSLQEAVDKLKSPP 193
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5A_MOUSE (Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 42/111 (37.84%), Postives = 61/111 (54.95%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 ++ESF K W+ E+ R AS N+ L GNK DL + V ++ A+++AD+ + FMETSAK S V + FMA+A + P N+AR V + +S CCS Sbjct: 104 NEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPAQPARSQCCS 214
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5A_MACFA (Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 42/111 (37.84%), Postives = 61/111 (54.95%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 ++ESF K W+ E+ R AS N+ L GNK DL + V ++ A+++AD+ + FMETSAK S V + FMA+A + P N+AR V + +S CCS Sbjct: 104 NEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTRSQCCS 214
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 42/111 (37.84%), Postives = 61/111 (54.95%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 ++ESF K W+ E+ R AS N+ L GNK DL + V ++ A+++AD+ + FMETSAK S V + FMA+A + P N+AR V + +S CCS Sbjct: 104 NEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTRSQCCS 214
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIK 298 D++SF N++ W+ I AS V +LL+GNKCD+ A + V E A A E GI F ETSAK S V++AF ++A I + + S N +PP+ +K Sbjct: 92 DEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLK 190
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.292e-15 Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 ++ESF K W+ E+ R AS N+ L GNK DL + V ++ A+++AD+ + FMETSAK S V + FMA+A + P N+AR V + ++ CCS Sbjct: 104 NEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCS 214
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.292e-15 Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPS 262 +++SF+N++ WL EI YA +V +L+GNK D T ++VV E + A E G+PFMETSA+ V+ AF A+A +K R A PS Sbjct: 152 NKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPS 238 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |