FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQK 319 +++SF+N++ W+ I+ +AS +V K+++GNKCD+ + VS E + A + GI FMETSAK + VE AF +A IK +M + N+ + +K P QK Sbjct: 92 NEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQK 197
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5A_PIG (Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 ++ESF K W+ E+ R AS N+ L GNK DL + V ++ A+++AD+ + FMETSAK S V + FMA+A + P +N R V + +S CCS Sbjct: 104 NEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGINCTRGRGVDLTEPTQPTRSQCCS 214
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGC 328 D++SF N++ W+ I AS V +LL+GNKCD+ A + V E A A E GI F ETSAK S V++AF ++A I + + S N+++P + +K + C Sbjct: 92 DEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRSGNHSKPSSTDLKPSDKKNTNKC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14 Identity = 37/115 (32.17%), Postives = 67/115 (58.26%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGCCS 334 +++SFN+V+ W+ +I Y+ DN +LVGNKCD+ +V+S+E + AD++G+ F ETSAK++ V+ F + I D+M+ + P++ ++ QP + C+ Sbjct: 105 NEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLVGGGQKGQRLTDQPQGTPNANCN 219
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQK 319 +++SF N++ W+ I+ +AS +V K+++GNKCD + VS E + A GI FMETSAK + +E AF +A IK +M + N+ + +K P QK Sbjct: 92 NEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQK 197
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGC 328 D++SF N++ W+ I AS V +LL+GNKCD+ A + V E A+ A E I F ETSAK S V++AF ++A I + + S N+++P + +K + C Sbjct: 92 DEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGNSSKPSSTDLKVSDKKNSNKC 200
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB5B_CHICK (Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14 Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 +QE+F K W+ E+ R AS ++ L GNK DL + ++V YE A+A+AD+ + FMETSAK + V F+A+A + S R V + Q KS CCS Sbjct: 104 NQETFARAKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTSGAAGRSRGVDLHEQTQQNKSQCCS 214
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14 Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQ 304 ++ESFN+V+ W +I Y+ +N +LVGNKCD+ + +VVS + + AD++G+ F ETSAK++ V+ F + I D+MA + P Q KGQ Sbjct: 106 NEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLD----KDPQQQPKGQ 202
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14 Identity = 40/113 (35.40%), Postives = 67/113 (59.29%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQ--PSMNNARPPTVQIK-GQPVAQKSGCC 331 D+ +F N+KQW ++ +A+D LLVGNK D+ +VV+YE +A A E+G+PF+E+SAK+ V + F +A I++++ S N+ + + I + + KS CC Sbjct: 104 DERTFANIKQWFKTVNEHANDEAQLLLVGNKSDMDT-RVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQEKIDSNKLSGPNSGKDGNISINANKGDSSKSNCC 215
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14 Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGCC 331 ++ESFN V+ W +I Y+ DN +LVGNKCD+ +VV E + A+++G F E SAK++ +V QAF + +I D+M+ + PS+ A T P+ Q++ C Sbjct: 106 NEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |