FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14 Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGCC 331 ++ESFN V+ W +I Y+ DN +LVGNKCD+ +VV E + A+++G F E SAK++ +V QAF + +I D+M+ + PS+ A T P+ Q++ C Sbjct: 106 NEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSLDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14 Identity = 41/96 (42.71%), Postives = 65/96 (67.71%), Query Frame = 2 Query: 11 SFNNVKQ-WLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQI 295 SF+++ + WL +ID+YA+ NV KLL+GNK DL ++VVS + AK A++ + ++E SAK + VE+AF +A ++KD++ PS NA TV + Sbjct: 94 SFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS--NAPASTVSL 187
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 40/113 (35.40%), Postives = 66/113 (58.41%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQP--SMNNARPPTVQI-KGQPVAQKSGCC 331 D+ +F N+KQW ++ +A+D LLVGNK D+ +VV+ + +A A E+GIPF+E+SAK+ V + F +A I++++ S + N + + I G + KS CC Sbjct: 104 DERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNISINSGSGNSSKSNCC 215
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 34/91 (37.36%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNA 274 +++SF+N+K W+ I+ +AS +V ++++GNKCD+ + VS E + A + GI F+ETSAK S VE+AF +A I ++ + + +N+ Sbjct: 92 NEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNS 182
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 40/114 (35.09%), Postives = 65/114 (57.02%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGCC 331 ++ESFN V+ W +I Y+ DN +LVGNKCD+ +V+ E + A+++G F E SAK++ +V QAF + +I D+M+ + PS+ A T P+ Q++ C Sbjct: 106 NEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB3B_HUMAN (Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMA----SQPSMNNARPPTVQIKGQPVAQKSGCC 331 ++ESFN V+ W +I Y+ DN +LVGNKCD+ +VV E + A+++G F E SAK++ +V QAF + +I D+M+ + PSM + T P+ Q++ C Sbjct: 106 NEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC 219
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQP 307 ++ESFN V+ W +I Y+ DN LLVGNKCD+ +VVS E + AD +G F E SAKD+ V+Q F + I ++M+ S++ A P K P Sbjct: 106 NEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSE--SLDTADPAVTGAKQGP 205
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQP 307 ++ESFN V+ W +I Y+ DN LLVGNKCD+ +VVS E + AD +G F E SAKD+ V+Q F + I ++M+ S++ A P K P Sbjct: 106 NEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSE--SLDTADPAVTGAKQGP 205
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQP 307 ++ESFN V+ W +I Y+ DN LLVGNKCD+ +VVS E + AD +G F E SAKD+ V+Q F + I ++M+ S++ A P K P Sbjct: 106 NEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSE--SLDTADPAVTGAKQGP 205
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQP 307 ++ESFN V+ W +I Y+ DN LLVGNKCD+ +VVS E + AD +G F E SAKD+ V+Q F + I ++M+ S++ A P K P Sbjct: 106 NEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSE--SLDTADPAVTGAKQGP 205 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |