FC931417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931417 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.314e-26 Identity = 70/174 (40.23%), Postives = 108/174 (62.07%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQ---QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 520 MGRG++E+KRIEN NRQVT++KRRNG+LKKA E+SVLCDA V++IIF++ GK++EF SS+S++ L++Y K ++ R L+ + E K+K + +Q R+L GE++ LN +EL LE L+ L IR+ + + + + Q E+ + N L+Q Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF-SSTSLVDILDQYHK---------LTGRRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQNEVLRMMRKKTQSMEEEQDQLNCQLRQ 164
BLAST of FC931417 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 78/212 (36.79%), Postives = 114/212 (53.77%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSS-MLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALEC 640 MGRG++E+K+IEN+ RQVTF+KRR GL+KK ELS+LCDA + LI+FS GKL EFCS + M + ++RY N G P+ + +L + E L+ + L+ R G +L + EL+ LERQL+ S+ ++R + + M L L K ++L E N + + L E Q G KP + Q F L+C Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYLHTN-GLRLPD-HHDDQEQLHHEMELLRRETC--NLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHEHRAAMEFQ------QAGIDTKPGEYQ--QFIEQLQC 200
BLAST of FC931417 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 71/176 (40.34%), Postives = 107/176 (60.80%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELS-SQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 532 M R R E+KRIE+ RQVTF+KRR GL KKA ELSVLCDA+VALI+FS+ GKL F +SSSM + +++Y N + + + +L+L+ +Y L + R + GEEL L+ EL+ LE+ L+ L ++ T+ Q ++ ++ELQ K L+E N L+ ++ + Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHF-ASSSMNEIIDKY---NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQ 172
BLAST of FC931417 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 70/174 (40.23%), Postives = 107/174 (61.49%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQ-QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 526 MGR +VE+KRIENK +RQVTF+KRRNGL++KA +LS+LC++ +A+++ S GKLY+ S +M K ++RY+ + EAL+L+ + + YL LK E L+ Q L + + L SLE QL+ +L R+ +T+ M+ + LQ E LL E N+TL ++ Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYE-------IHHADELEALDLAEKTRNYLPLK---ELLEIVQSKLEESNVDNASVDTLISLEEQLETALSVTRARKTELMMGEVKSLQKTENLLREENQTLASQV 164
BLAST of FC931417 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 64/179 (35.75%), Postives = 113/179 (63.13%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMLKTLERYQKCNYGAPEPNVSAREALELSSQ---QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 532 MGRG++E+KRIEN NRQVT++KRRNG++KKA E+SVLCDA V++IIF++ GK++EFCS S++++ L+ Y K +S + + + E ++K +++Q R+L GE++ LN KEL LE L+ +++ + ++ + ++ +++ E N++L+ +L + Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHK---------LSGKRLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEF----VRMMRKHNEMVEEENQSLQFKLRQ 166
BLAST of FC931417 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.163e-25 Identity = 67/187 (35.83%), Postives = 104/187 (55.61%), Query Frame = 2 Query: 14 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAE 574 R R+ ++RI+N RQVTF+KRR GL KKA ELS+LCDAEV L++FS GKL++F +S+SM + ++RY + S + L+ +LK R + GEEL LN ++L+ LE+ L+ L + T+++ +LD + L+ K L E N LK++L ++ P + Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQF-ASTSMEQIIDRYNSHSKTLQRAEPSQLD-LQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRMEEMQPGPD 206
BLAST of FC931417 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.392e-24 Identity = 68/170 (40.00%), Postives = 102/170 (60.00%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 514 M RG++++KRIEN+ NRQVT++KRRNGL KKA EL+VLCDA+V++I+ S+ GKL+EF S S K L + YQK V + Q++ KLK L++ R +GE L LN ++LE L +D SLK IR + + + + + + K + + E ++ L Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQK------TVGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRNVEEIHRNL 164
BLAST of FC931417 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24 Identity = 63/159 (39.62%), Postives = 98/159 (61.64%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK 481 MGRGRVELK+IEN NRQVTF+KRR GLLKKA EL++LCDA++ +I+FS GK+YE+ S + + +RY K AP + ++ QE ++K L+ R +G++L L +++ +LE+Q++ SL ++R + Q + L E+ + Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLK----APSTRFEEMD-VQQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQLLEMHSR 154
BLAST of FC931417 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.051e-24 Identity = 61/185 (32.97%), Postives = 107/185 (57.84%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNS-KELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQL 559 MG+G++E+KRIE+ RQVTF+KRR G LKKA EL+VLCDA+V +++FS++GKL++FCS +L +E + + + + E +L+ + L+ S R GE+L +++ EL L+ QL+ SL ++ + + + M L +++ Q + E N L + + + +N + + Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVIL--MELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFLCRMVTKILLLNVITI 183
BLAST of FC931417 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23 Identity = 70/194 (36.08%), Postives = 113/194 (58.25%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERY--QKCNYGA--PEPNV--------------SAREALELSSQQEYLKLKARYEALQRSQ---RNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 526 M R R E++RIE+ RQVTF+KRR GL KKA EL+VLCDA+VAL++FS+ GKL +F +SS+M + +++Y N G +P++ ++ + L Q E+ K + E L + R + GEEL L+ +EL+ +E+ L+ L+++ T+ Q + ++ELQ K L+E N L+ ++ Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQF-ASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQM 193 The following BLAST results are available for this feature:
BLAST of FC931417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931417 ID=FC931417; Name=FC931417; organism=Citrus clementina; type=EST; length=718bpback to top |