FC931420

Overview
NameFC931420
Unique NameFC931420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.154e-38
Identity = 80/213 (37.56%), Postives = 125/213 (58.69%), Query Frame = 3
Query:   15 YKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            Y+ +  AT  F     +G GGFG  Y+  +  + +  AVK++S    QG ++F AEI ++  +RH NLV L+GY   + E+ L+Y+Y+  G+L  ++  + K  + W+  + +   VA  L YLHE+    V+HRD+K SN+LLD   N  L DFGL++L        TT V GT GY+APE++ T + +  ADV+S+G  LLE+   +R ++
Sbjct:  251 YEIIVRATGYFSNSNCIGHGGFGSTYKAEVSPTNV-FAVKRLSVGRFQGDQQFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQDFIKERSKAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALD 462          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.154e-38
Identity = 95/227 (41.85%), Postives = 135/227 (59.47%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHES--RQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQP---KVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARL--YDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQK 668
            F Y++L  AT GF E   +G G F  V++G L    + +AVK+    S  ++  KEF  E+  + RL H +L+ LLGYC    E LLVY++M +GSL ++L+ +    K  LNW +R  +    A G+ YLH      VIHRD+K+SN+L+D + N R+ DFGL+ L   D GT P +    GTLGYL PE+ R    TT +DV+SFG  LLE+  GR+ I+ Q ++
Sbjct:  493 FSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTV-VAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGT-PLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEE 717          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.038e-38
Identity = 88/223 (39.46%), Postives = 130/223 (58.30%), Query Frame = 3
Query:   15 YKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYN-------QPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLA-RLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQ 659
            + +L  AT  F    L+G G +GRVY G L  + +  A+KK+   ++Q   EF+A++  + RL+H N VQLLGYC      +L Y++  NGSL   L+        QP   L+W QR  +  G A GL YLHE+    +IHRD+K+SNVLL  +   ++ DF L+ +  D      +T V+GT GY APE++ TG+    +DV+SFG  LLE+  GR+P++ +
Sbjct:   63 FSELKEATDDFGSNSLIGEGSYGRVYYGVL-NNDLPSAIKKLD-SNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHR 283          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.050e-37
Identity = 90/224 (40.18%), Postives = 130/224 (58.04%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKV-TLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYD-HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQKR 671
            +F Y ++   TK F  + +LG GGFG VY G L  +  ++AVK +SH S QG KEF AE+  + R+ HR+LV L+GYC     L L+Y+YM  G L + +  +  V  L+W  R  +    A GL YLH      ++HRDVK +N+LL+     +L DFGL+R +   G     T V GT GYL PE+ RT   +  +DV+SFG  LLE+    +P+  ++++R
Sbjct:  559 KFTYSEVLKMTKNF--ERVLGKGGFGTVYHGNLDDT--QVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVT-NQPVMNKNRER 777          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.371e-37
Identity = 83/213 (38.97%), Postives = 130/213 (61.03%), Query Frame = 3
Query:   51 EKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKE----------FVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKV-TLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTH-VVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            E  ++G G  G VY+  +P  ++ IAVKK+   +   + E          F AE+ ++G +RH+N+V+ LG C  K   LL+YDYM NGSL   L+ +  V +L W  RY +I G A GL YLH +    ++HRD+KA+N+L+  +    +GDFGLA+L D G   ++++ + G+ GY+APE+  + K T  +DV+S+G  +LEV  G++PI+
Sbjct:  787 EGNVIGKGCSGIVYKAEMPNREV-IAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPID 998          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.791e-37
Identity = 82/215 (38.14%), Postives = 127/215 (59.07%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQP-KVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            F  K +  AT G+ E  +LG GG G VY+G LP + I +A+KK    +R  +++F+ E++ + ++ HRN+V++LG C      LLVY+++ +G+L  +L+      +L W  R  +   VA  L YLH      +IHRD+K +N+LLD  L  ++ DFG +RL     +  TT V GTLGYL PE+  TG     +DV+SFG  L+E+  G++ +
Sbjct:  392 FTEKGMKEATNGYHESRILGQGGQGTVYKGILPDNSI-VAIKKARLGNRSQVEQFINEVLVLSQINHRNVVKVLGCCLETEVPLLVYEFINSGTLFDHLHGSLYDSSLTWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKAL 605          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.791e-37
Identity = 82/220 (37.27%), Postives = 124/220 (56.36%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKG-----ELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPI 650
            +F + ++  AT  F    ++G GG+G V++G LP    ++A K+  + S  G   F  E+  I  +RH NL+ L GYC         + ++V D + NGSL  +L+   +  L W  R  +  G+A GL YLH   +  +IHRD+KASN+LLD     ++ DFGLA+    G    +T V GT+GY+APE++  G+ T  +DV+SFG  LLE+   R+ I
Sbjct:  270 KFSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGT-QVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAI 488          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.339e-37
Identity = 90/226 (39.82%), Postives = 129/226 (57.08%), Query Frame = 3
Query:    6 RFRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLY-NQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYD-HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQSQKRIY 677
            R  Y ++   T  F  + +LG GGFG VY G L  +  ++AVK +SH S QG KEF AE+  + R+ HRNLV L+GYC     L L+Y+YM NG L + +   +    L W  R  +    A GL YLH      ++HRDVK +N+LL+     +L DFGL+R +   G    +T V GT GYL PE+ RT   +  +DV+SFG  LLE+    +P+  ++++R +
Sbjct:  555 RITYPEVLKMTNNF--ERVLGKGGFGTVYHGNLEDT--QVAVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVT-NQPVTDKTRERTH 775          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.339e-37
Identity = 80/215 (37.21%), Postives = 125/215 (58.14%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            F YK++  AT GF EK+ LG G +G VYRG L   +  +A+K++ H   + + + + EI  +  + H NLV+LLG C  +G+ +LVY+YMPNG+L ++L       L W  R  V    A  + YLH      + HRD+K++N+LLD + N ++ DFGL+RL    +   +T   GT GYL P++ +    +  +DV+SFG  L E+  G + ++
Sbjct:  336 FPYKEIEKATDGFSEKQKLGIGAYGTVYRGKLQNDEW-VAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVVD 549          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.989e-37
Identity = 80/211 (37.91%), Postives = 128/211 (60.66%), Query Frame = 3
Query:   51 EKELLGSGGFGRVYRGTLPKSKIEIAVKKI---------SHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTH-VVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIE 653
            E  ++G G  G VYR  +   ++ IAVKK+           +++     F AE+ ++G +RH+N+V+ LG C  +   LL+YDYMPNGSL   L+ +   +L+W  RY ++ G A GL YLH +    ++HRD+KA+N+L+  +    + DFGLA+L D G   + ++ V G+ GY+APE+  + K T  +DV+S+G  +LEV  G++PI+
Sbjct:  788 EPNVIGKGCSGVVYRADVDNGEV-IAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPID 997          
The following BLAST results are available for this feature:
BLAST of FC931420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RPK1_ARATH6.154e-3837.56Probable LRR receptor-like serine/threonine-protei... [more]
CRI4_MAIZE6.154e-3841.85Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y2706_ARATH8.038e-3839.46Probable receptor-like protein kinase At2g47060 OS... [more]
Y5189_ARATH1.050e-3740.18Probable LRR receptor-like protein kinase At1g5189... [more]
RCH1_ARATH1.371e-3738.97LRR receptor-like serine/threonine-protein kinase ... [more]
WAK2_ARATH1.791e-3738.14Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
RKF3_ARATH1.791e-3737.27Probable LRR receptor-like serine/threonine-protei... [more]
Y5188_ARATH2.339e-3739.82Probable LRR receptor-like serine/threonine-protei... [more]
WAKLO_ARATH2.339e-3737.21Wall-associated receptor kinase-like 14 OS=Arabido... [more]
RCH2_ARATH3.989e-3737.91Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104H09EF PostHarvP1 Citrus clementina cDNA clone C34104H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931420 ID=FC931420; Name=FC931420; organism=Citrus clementina; type=EST; length=700bp
CTCACAGGTTCAGGTACAAAGATCTTTACATTGCCACTAAAGGGTTCAGA
GAGAAAGAACTGCTAGGCAGCGGCGGATTTGGGAGAGTGTATAGGGGTAC
ACTGCCCAAATCCAAAATTGAGATTGCAGTGAAGAAGATTTCTCACGAAT
CCAGACAGGGGATGAAGGAATTCGTTGCGGAGATTGTGAGCATCGGTCGC
CTCAGGCACCGGAATTTAGTGCAACTCTTGGGATATTGCCGGCGTAAAGG
GGAGCTGCTTTTGGTCTATGATTACATGCCTAATGGAAGCTTAGACAAAT
ACCTCTATAACCAACCAAAAGTCACACTAAACTGGAGACAAAGATATGGA
GTCATCAAAGGTGTCGCATTAGGCCTGTTATATTTGCACGAAGAATGGGA
ACAAGTTGTGATTCACAGAGATGTTAAGGCAAGTAACGTGTTGCTTGATG
GTGAATTAAACGGAAGATTGGGAGATTTCGGCCTGGCAAGATTATACGAC
CACGGAACAGATCCACAAACAACGCACGTTGTGGGAACACTTGGGTACCT
TGCCCCTGAGCACAGTCGGACAGGCAAGGCCACCACAAGCGCTGATGTGT
TTTCATTTGGGGCATTTTTGCTTGAAGTTGCTTGCGGGAGAAGGCCAATT
GAGAGACAGAGCCAGAAGAGAATTTATTTTGGTTGATTGCGTGNTTGACT
back to top