FC931420

Overview
NameFC931420
Unique NameFC931420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: ABL1_CAEEL (Tyrosine-protein kinase abl-1 OS=Caenorhabditis elegans GN=abl-1 PE=1 SV=4)

HSP 1 Score: 89.7373 bits (221), Expect = 1.576e-17
Identity = 61/190 (32.11%), Postives = 92/190 (48.42%), Query Frame = 3
Query:   63 LGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVA 632
            LG G +G VY G   +    IAVK +  E    + EF+AE   +  L H+NLV+LLG C  +    ++ ++M NG+L +YL    K  L       +   +A G+ YL     +  IHRD+ A N L+      ++ DFGLAR     T          + + APE       ++ +DV++FG  L E+A
Sbjct:  317 LGGGQYGDVYEGYWKRHDCTIAVKALK-EDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLE---ARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKEDTYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIA 502          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: TESK1_RAT (Dual specificity testis-specific protein kinase 1 OS=Rattus norvegicus GN=Tesk1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17
Identity = 65/197 (32.99%), Postives = 103/197 (52.28%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLL---DGELNGRLGDFGLAR---LYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E +G+G F  VY+    +S   + +K     S +     + E+  + RLRH N+++ +G C  +G+L  + +YM  G+L++ L + P+  L+W  R  +   +A GL YLH +    V HRD+ + N L+   DG     +GDFGLA    +Y  G   +   VVG+  ++APE  R       ADVF+FG  L E+
Sbjct:   56 EKIGAGFFSEVYKVRHRQSGQVMVLKMNKLPSNRS--NTLREVQLMNRLRHPNILRFMGVCVHQGQLHALTEYMNGGTLEQ-LLSSPE-PLSWPVRLHLALDIAQGLRYLHAKG---VFHRDLTSKNCLVRREDGGFTAVVGDFGLAEKIPVYREGARKEPLAVVGSPYWMAPEVLRGELYDEKADVFAFGIVLCEL 245          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: NTRK3_SAIBB (NT-3 growth factor receptor OS=Saimiri boliviensis boliviensis GN=NTRK3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17
Identity = 64/219 (29.22%), Postives = 104/219 (47.49%), Query Frame = 3
Query:   54 KELLGSGGFGRV-----YRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLY--------------NQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV-ACGRRP 647
            K  LG G FG+V     Y  +  K K+ +AVK +   +    K+F  E   +  L+H ++V+  G C     L++V++YM +G L+K+L                Q K  L   Q   +   +A G++YL     Q  +HRD+   N  +   L  ++GDFG++R +Y         H +  + ++ PE     K TT +DV+SFG  L E+   G++P
Sbjct:  541 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPXQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCXVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 756          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: NTRK3_PIG (NT-3 growth factor receptor OS=Sus scrofa GN=NTRK3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17
Identity = 64/219 (29.22%), Postives = 104/219 (47.49%), Query Frame = 3
Query:   54 KELLGSGGFGRV-----YRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLY--------------NQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV-ACGRRP 647
            K  LG G FG+V     Y  +  K K+ +AVK +   +    K+F  E   +  L+H ++V+  G C     L++V++YM +G L+K+L                Q K  L   Q   +   +  G++YL     Q  +HRD+   N L+   L  ++GDFG++R +Y         H +  + ++ PE     K TT +DV+SFG  L E+   G++P
Sbjct:  541 KRELGEGAFGKVFLAECYNLSPTKVKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQICSGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 756          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MKCC_DICDI (Probable serine/threonine-protein kinase mkcC OS=Dictyostelium discoideum GN=mkcC PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17
Identity = 61/208 (29.33%), Postives = 102/208 (49.04%), Query Frame = 3
Query:   39 KGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRPIERQS 662
            K ++  + +GSGGFG V+       K EIA+KKI+H S +  +  + EI  +   +H N+V  L        + +  +YM  G+L +        T N      V KG+  GL+YLH      ++HRD+K+ N+++  +   ++ DFGL        + +  H+ G+  +++PE  R        D++SF   LLE+A G  P  + S
Sbjct:  614 KLYKNLKQIGSGGFGSVFLAKSTVDKCEIAIKKIAHVSAKAQRTNLNEIGFLNFCKHPNIVSYLRSHLVDDTIWIAMEYMQGGTLTEASQGH---TFNESCIAYVAKGMLEGLMYLH---AHNIVHRDIKSGNIMMTIDGKIKIVDFGLC---VDANERKLVHMAGSPFWMSPEMIRGESYGCPTDIWSFAICLLELANGEPPHRKSS 812          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_NEONE (Hepatocyte growth factor receptor OS=Neofelis nebulosa GN=MET PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17
Identity = 71/202 (35.15%), Postives = 108/202 (53.47%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKS---KIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL  S   KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1083 EVIGRGHFGCVYHGTLLDSDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1277          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_FELCA (Hepatocyte growth factor receptor OS=Felis catus GN=MET PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17
Identity = 71/202 (35.15%), Postives = 108/202 (53.47%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKS---KIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL  S   KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1083 EVIGRGHFGCVYHGTLLDSDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1277          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_DASNO (Hepatocyte growth factor receptor OS=Dasypus novemcinctus GN=MET PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17
Identity = 71/202 (35.15%), Postives = 108/202 (53.47%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKS---KIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL  S   KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1083 EVIGRGHFGCVYHGTLLDSDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1277          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: LIMK1_DROME (LIM domain kinase 1 OS=Drosophila melanogaster GN=LIMK1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17
Identity = 68/241 (28.22%), Postives = 107/241 (44.40%), Query Frame = 3
Query:    9 FRYKDLYIATKGFREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDP----------------------------------QTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            FR  DL I  K       LG G FG+V++ T  +S   + +K++     +  + F+ E+  +  L HR++++ +G   +  +L +V +Y+  G L K L + P   L W QR  + + +A G+ YLH      +IHRD+ + N L+  + +  + DFGLAR  D    P                                  Q   VVG   ++APE  +  K     DVFSFG  L E+
Sbjct:  396 FRATDLVIGEK-------LGEGFFGKVFKVTHRQSGEVMVLKELHRADEEAQRNFIKEVAVLRLLDHRHVLKFIGVLYKDKKLHMVTEYVAGGCL-KELIHDPAQVLPWPQRVRLARDIACGMSYLH---SMNIIHRDLNSMNCLVREDRSVIVADFGLARSVDAPRLPSGNMTPGGYGSGANSDAPMSPSGTLRRSKSRQRRQRYTVVGNPYWMAPEMMKGLKYDEKVDVFSFGIMLCEI 625          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: FRK_HUMAN (Tyrosine-protein kinase FRK OS=Homo sapiens GN=FRK PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17
Identity = 63/192 (32.81%), Postives = 101/192 (52.60%), Query Frame = 3
Query:   63 LGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLY--DHGTDPQTTHVVG-TLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            LGSG FG V+ G L  +   +AVK +   S     +F+ E   +  LRH  L+QL   C  +  + ++ + M +GSL +YL N     ++  Q+  +   VA G+ YL     +  IHRD+ A NVL+      ++ DFGLAR++  D+    ++ H +   + + APE  R+ K +  +DV+SFG  L E+
Sbjct:  240 LGSGQFGEVWEG-LWNNTTPVAVKTLKPGSMDP-NDFLREAQIMKNLRHPKLIQLYAVCTLEDPIYIITELMRHGSLQEYLQNDTGSKIHLTQQVDMAAQVASGMAYLE---SRNYIHRDLAARNVLVGEHNIYKVADFGLARVFKVDNEDIYESRHEIKLPVKWTAPEAIRSNKFSIKSDVWSFGILLYEI 426          
The following BLAST results are available for this feature:
BLAST of FC931420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ABL1_CAEEL1.576e-1732.11Tyrosine-protein kinase abl-1 OS=Caenorhabditis el... [more]
TESK1_RAT2.058e-1732.99Dual specificity testis-specific protein kinase 1 ... [more]
NTRK3_SAIBB2.058e-1729.22NT-3 growth factor receptor OS=Saimiri boliviensis... [more]
NTRK3_PIG2.058e-1729.22NT-3 growth factor receptor OS=Sus scrofa GN=NTRK3... [more]
MKCC_DICDI2.058e-1729.33Probable serine/threonine-protein kinase mkcC OS=D... [more]
MET_NEONE2.058e-1735.15Hepatocyte growth factor receptor OS=Neofelis nebu... [more]
MET_FELCA2.058e-1735.15Hepatocyte growth factor receptor OS=Felis catus G... [more]
MET_DASNO2.058e-1735.15Hepatocyte growth factor receptor OS=Dasypus novem... [more]
LIMK1_DROME2.058e-1728.22LIM domain kinase 1 OS=Drosophila melanogaster GN=... [more]
FRK_HUMAN2.058e-1732.81Tyrosine-protein kinase FRK OS=Homo sapiens GN=FRK... [more]

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Properties
Property NameValue
Genbank descriptionC34104H09EF PostHarvP1 Citrus clementina cDNA clone C34104H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931420 ID=FC931420; Name=FC931420; organism=Citrus clementina; type=EST; length=700bp
CTCACAGGTTCAGGTACAAAGATCTTTACATTGCCACTAAAGGGTTCAGA
GAGAAAGAACTGCTAGGCAGCGGCGGATTTGGGAGAGTGTATAGGGGTAC
ACTGCCCAAATCCAAAATTGAGATTGCAGTGAAGAAGATTTCTCACGAAT
CCAGACAGGGGATGAAGGAATTCGTTGCGGAGATTGTGAGCATCGGTCGC
CTCAGGCACCGGAATTTAGTGCAACTCTTGGGATATTGCCGGCGTAAAGG
GGAGCTGCTTTTGGTCTATGATTACATGCCTAATGGAAGCTTAGACAAAT
ACCTCTATAACCAACCAAAAGTCACACTAAACTGGAGACAAAGATATGGA
GTCATCAAAGGTGTCGCATTAGGCCTGTTATATTTGCACGAAGAATGGGA
ACAAGTTGTGATTCACAGAGATGTTAAGGCAAGTAACGTGTTGCTTGATG
GTGAATTAAACGGAAGATTGGGAGATTTCGGCCTGGCAAGATTATACGAC
CACGGAACAGATCCACAAACAACGCACGTTGTGGGAACACTTGGGTACCT
TGCCCCTGAGCACAGTCGGACAGGCAAGGCCACCACAAGCGCTGATGTGT
TTTCATTTGGGGCATTTTTGCTTGAAGTTGCTTGCGGGAGAAGGCCAATT
GAGAGACAGAGCCAGAAGAGAATTTATTTTGGTTGATTGCGTGNTTGACT
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