FC931420

Overview
NameFC931420
Unique NameFC931420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_COLGU (Hepatocyte growth factor receptor OS=Colobus guereza GN=MET PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17
Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKS---KIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL  +   KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1082 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1276          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_CERAE (Hepatocyte growth factor receptor OS=Cercopithecus aethiops GN=MET PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17
Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKS---KIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL  +   KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1082 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1276          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_CALMO (Hepatocyte growth factor receptor OS=Callicebus moloch GN=MET PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17
Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKS---KIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL  +   KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1082 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1276          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_CALJA (Hepatocyte growth factor receptor OS=Callithrix jacchus GN=MET PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17
Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKS---KIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL  +   KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1082 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1276          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_ATEGE (Hepatocyte growth factor receptor OS=Ateles geoffroyi GN=MET PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17
Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKS---KIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL  +   KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1082 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1276          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_ATEAB (Hepatocyte growth factor receptor OS=Atelerix albiventris GN=MET PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17
Identity = 70/202 (34.65%), Postives = 106/202 (52.48%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTL---PKSKIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL      KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD     ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1083 EVIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDENFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1277          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_AOTNA (Hepatocyte growth factor receptor OS=Aotus nancymaae GN=MET PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17
Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKS---KIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL  +   KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1082 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1276          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: PYK1_DICDI (Dual specificity protein kinase pyk1 OS=Dictyostelium discoideum GN=splA PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 63/214 (29.44%), Postives = 106/214 (49.53%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKSKIEIAV-KKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGE--LLLVYDYMPNGSLDKYLYNQPKVT-LNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGR-------------LGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVACGRRP 647
            + +G G FG V RG   ++ + I +  +   +++  +  F  E+  + +LRH N+VQ LG C   GE    +V ++M  GSL ++L +   +   N   R  +   +A G+ YLH  W   ++HRD+ + N+LLD  ++ +             + DFGL+RL       Q T  VG + Y+APE  +    +  +DV+S+G  L E+     P
Sbjct: 2119 QTIGKGFFGEVKRGYWRETDVAIKIIYRDQFKTKSSLVMFQNEVGILSKLRHPNVVQFLGACTAGGEDHHCIVTEWMGGGSLRQFLTDHFNLLEQNPHIRLKLALDIAKGMNYLHG-WTPPILHRDLSSRNILLDHNIDPKNPVVSSRQDIKCKISDFGLSRLKMEQAS-QMTQSVGCIPYMAPEVFKGDSNSEKSDVYSYGMVLFELLTSDEP 2330          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: PHO85_ASHGO (Negative regulator of the PHO system OS=Ashbya gossypii GN=PHO85 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 64/210 (30.48%), Postives = 115/210 (54.76%), Query Frame = 3
Query:   45 FREKELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEF-VAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPN-------GSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPE---HSRTGKATTSADVFSFGAFLLEVACGR 641
            F++ E LG+G +  VY+G    + + +A+K++  +S +G     + EI  +  L+H N+V+L      + +L LV+++M N         LD+ +    +++L    ++ +++GVA    + HE     ++HRD+K  N+L++ +   +LGDFGLAR +    +  ++ VV TL Y AP+    SRT    TS D++S G  L E+  G+
Sbjct:    9 FKQLERLGNGTYATVYKGLNKTTGLYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKFMDSRLDREMPRGLELSLVKYFQWQLLQGVA----FCHENR---ILHRDLKPQNLLINNKGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGSRT--YCTSIDIWSCGCILAEMIMGK 208          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_SHEEP (Hepatocyte growth factor receptor OS=Ovis aries GN=MET PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 70/202 (34.65%), Postives = 107/202 (52.97%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTL---PKSKIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL      KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1083 EVIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1277          
The following BLAST results are available for this feature:
BLAST of FC931420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MET_COLGU4.585e-1734.65Hepatocyte growth factor receptor OS=Colobus guere... [more]
MET_CERAE4.585e-1734.65Hepatocyte growth factor receptor OS=Cercopithecus... [more]
MET_CALMO4.585e-1734.65Hepatocyte growth factor receptor OS=Callicebus mo... [more]
MET_CALJA4.585e-1734.65Hepatocyte growth factor receptor OS=Callithrix ja... [more]
MET_ATEGE4.585e-1734.65Hepatocyte growth factor receptor OS=Ateles geoffr... [more]
MET_ATEAB4.585e-1734.65Hepatocyte growth factor receptor OS=Atelerix albi... [more]
MET_AOTNA4.585e-1734.65Hepatocyte growth factor receptor OS=Aotus nancyma... [more]
PYK1_DICDI5.989e-1729.44Dual specificity protein kinase pyk1 OS=Dictyostel... [more]
PHO85_ASHGO5.989e-1730.48Negative regulator of the PHO system OS=Ashbya gos... [more]
MET_SHEEP5.989e-1734.65Hepatocyte growth factor receptor OS=Ovis aries GN... [more]

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Properties
Property NameValue
Genbank descriptionC34104H09EF PostHarvP1 Citrus clementina cDNA clone C34104H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931420 ID=FC931420; Name=FC931420; organism=Citrus clementina; type=EST; length=700bp
CTCACAGGTTCAGGTACAAAGATCTTTACATTGCCACTAAAGGGTTCAGA
GAGAAAGAACTGCTAGGCAGCGGCGGATTTGGGAGAGTGTATAGGGGTAC
ACTGCCCAAATCCAAAATTGAGATTGCAGTGAAGAAGATTTCTCACGAAT
CCAGACAGGGGATGAAGGAATTCGTTGCGGAGATTGTGAGCATCGGTCGC
CTCAGGCACCGGAATTTAGTGCAACTCTTGGGATATTGCCGGCGTAAAGG
GGAGCTGCTTTTGGTCTATGATTACATGCCTAATGGAAGCTTAGACAAAT
ACCTCTATAACCAACCAAAAGTCACACTAAACTGGAGACAAAGATATGGA
GTCATCAAAGGTGTCGCATTAGGCCTGTTATATTTGCACGAAGAATGGGA
ACAAGTTGTGATTCACAGAGATGTTAAGGCAAGTAACGTGTTGCTTGATG
GTGAATTAAACGGAAGATTGGGAGATTTCGGCCTGGCAAGATTATACGAC
CACGGAACAGATCCACAAACAACGCACGTTGTGGGAACACTTGGGTACCT
TGCCCCTGAGCACAGTCGGACAGGCAAGGCCACCACAAGCGCTGATGTGT
TTTCATTTGGGGCATTTTTGCTTGAAGTTGCTTGCGGGAGAAGGCCAATT
GAGAGACAGAGCCAGAAGAGAATTTATTTTGGTTGATTGCGTGNTTGACT
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