FC931420

Overview
NameFC931420
Unique NameFC931420
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_RHIFE (Hepatocyte growth factor receptor OS=Rhinolophus ferrumequinum GN=MET PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 70/202 (34.65%), Postives = 106/202 (52.48%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTL---PKSKIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL      KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD     ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1082 EVIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDENFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1276          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_RAT (Hepatocyte growth factor receptor OS=Rattus norvegicus GN=Met PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKS---KIEIAVKKISHESR-QGMKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL  S   KI  AVK ++  +  + + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1083 EVIGRGHFGCVYHGTLLDSDGKKIHCAVKSLNRITDIEEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLVSK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1277          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_OTOGA (Hepatocyte growth factor receptor OS=Otolemur garnettii GN=MET PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 70/202 (34.65%), Postives = 107/202 (52.97%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKS---KIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL  +   KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD     ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1083 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDENFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1277          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_MUNMU (Hepatocyte growth factor receptor OS=Muntiacus muntjak GN=MET PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 70/202 (34.65%), Postives = 107/202 (52.97%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTL---PKSKIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL      KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1083 EVIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1277          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_LOXAF (Hepatocyte growth factor receptor OS=Loxodonta africana GN=MET PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKS---KIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL  +   KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1083 EVIGRGHFGCVYHGTLLDNGDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1277          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: MET_BOVIN (Hepatocyte growth factor receptor OS=Bos taurus GN=MET PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 70/202 (34.65%), Postives = 107/202 (52.97%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTL---PKSKIEIAVKKISHESRQG-MKEFVAEIVSIGRLRHRNLVQLLGYC-RRKGELLLVYDYMPNGSLDKYLYNQ---PKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLAR-LYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E++G G FG VY GTL      KI  AVK ++  +  G + +F+ E + +    H N++ LLG C R +G  L+V  YM +G L  ++ N+   P V    +   G    VA G+ YL  +     +HRD+ A N +LD +   ++ DFGLAR +YD  + +    T     + ++A E  +T K TT +DV+SFG  L E+
Sbjct: 1083 EVIGRGHFGCVYHGTLLDNDDKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV----KDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 1277          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: FPS_DROME (Tyrosine-protein kinase Fps85D OS=Drosophila melanogaster GN=Fps85D PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 60/192 (31.25%), Postives = 100/192 (52.08%), Query Frame = 3
Query:   57 ELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMK-EFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            E +G G FG VY+  L  +K+++AVK          K +F+ E   + +  H N+V+L+G C +K  +++V + +  GSL  YL       L  RQ+ G+ +  A G+ YL     +  IHRD+ A N L+D E + ++ DFG++R  +          +  + + APE    GK T+  DV+S+G  + E+
Sbjct: 1067 ERIGRGNFGDVYKAKLKSTKLDVAVKTCRMTLPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSN-GLTTRQQMGMCRDAAAGMRYLE---SKNCIHRDLAARNCLVDLEHSVKISDFGMSREEEEYIVSDGMKQI-PVKWTAPEALNFGKYTSLCDVWSYGILMWEI 1253          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: FGFR1_DUGJA (Fibroblast growth factor receptor 1 OS=Dugesia japonica GN=FGFR1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 62/205 (30.24%), Postives = 105/205 (51.22%), Query Frame = 3
Query:   63 LGSGGFGRVYRGTLP-----KSKIEIAVKKISHE-SRQGMKEFVAEIVSIGRL-RHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKG---------VALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV 629
            LG G FG VY G         + I++AVK +  + S   + +FV E+  +  + RH N++QLLG C +KG L ++ +  P G+L  ++  + K     ++  G             +A G+ YL     + V+HRD+ A N+L+      ++ DFGL R+ D+    +T  ++  + ++APE     K TT +DV+S+G  L E+
Sbjct:  557 LGEGAFGMVYEGIANDIGNRSNPIKVAVKMMRDDFSDSNVHDFVKEMEIMKHIGRHPNVIQLLGLCTQKGPLRVIVELAPYGNLRDFVRAKNKKYSKSKKIIGNFTSSILCTYSLQIARGMTYLA---SRSVVHRDLSARNILVGEHFEMKIADFGLTRIVDYYYRKKTDGIL-PVKWMAPEALLEKKYTTKSDVWSYGILLWEI 757          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: EPHA1_HUMAN (Ephrin type-A receptor 1 OS=Homo sapiens GN=EPHA1 PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 66/212 (31.13%), Postives = 113/212 (53.30%), Query Frame = 3
Query:   60 LLGSGGFGRVYRGTL--PKSKIE-IAVKKISHESRQGMK-EFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYD--HGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEV-ACGRRPIERQSQKRI 674
            ++G G FG VYRGTL  P    + +A+K +   S  G    F+ E   +G+  H +++ L G   ++  ++++ ++M NG+LD +L  + +  L   Q   +++G+A G+ YL        +HRD+ A N+L++  L  ++ DFGL RL D   GT  +T      + + APE       TT++DV+SFG  + EV + G +P    S + +
Sbjct:  629 VIGEGEFGEVYRGTLRLPSQDCKTVAIKTLKDTSPGGQWWNFLREATIMGQFSHPHILHLEGVVTKRKPIMIITEFMENGALDAFL-REREDQLVPGQLVAMLQGIASGMNYLSNH---NYVHRDLAARNILVNQNLCCKVSDFGLTRLLDDFDGT-YETQGGKIPIRWTAPEAIAHRIFTTASDVWSFGIVMWEVLSFGDKPYGEMSNQEV 835          
BLAST of FC931420 vs. ExPASy Swiss-Prot
Match: ABL_MLVAB (Tyrosine-protein kinase transforming protein Abl OS=Abelson murine leukemia virus GN=ABL PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 57/193 (29.53%), Postives = 97/193 (50.26%), Query Frame = 3
Query:   54 KELLGSGGFGRVYRGTLPKSKIEIAVKKISHESRQGMKEFVAEIVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPKVTLNWRQRYGVIKGVALGLLYLHEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHSRTGKATTSADVFSFGAFLLEVA 632
            K  LG G +G VY G   K  + +AVK +  ++ + ++EF+ E   +  ++H NLVQLLG C R+    ++ ++M  G+L  YL    +  ++      +   ++  + YL ++     IHRD+ A N L+      ++ DFGL+RL    T          + + APE     K +  +DV++FG  L E+A
Sbjct:  131 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 319          
The following BLAST results are available for this feature:
BLAST of FC931420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MET_RHIFE5.989e-1734.65Hepatocyte growth factor receptor OS=Rhinolophus f... [more]
MET_RAT5.989e-1734.65Hepatocyte growth factor receptor OS=Rattus norveg... [more]
MET_OTOGA5.989e-1734.65Hepatocyte growth factor receptor OS=Otolemur garn... [more]
MET_MUNMU5.989e-1734.65Hepatocyte growth factor receptor OS=Muntiacus mun... [more]
MET_LOXAF5.989e-1734.65Hepatocyte growth factor receptor OS=Loxodonta afr... [more]
MET_BOVIN5.989e-1734.65Hepatocyte growth factor receptor OS=Bos taurus GN... [more]
FPS_DROME5.989e-1731.25Tyrosine-protein kinase Fps85D OS=Drosophila melan... [more]
FGFR1_DUGJA5.989e-1730.24Fibroblast growth factor receptor 1 OS=Dugesia jap... [more]
EPHA1_HUMAN5.989e-1731.13Ephrin type-A receptor 1 OS=Homo sapiens GN=EPHA1 ... [more]
ABL_MLVAB5.989e-1729.53Tyrosine-protein kinase transforming protein Abl O... [more]

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Properties
Property NameValue
Genbank descriptionC34104H09EF PostHarvP1 Citrus clementina cDNA clone C34104H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931420 ID=FC931420; Name=FC931420; organism=Citrus clementina; type=EST; length=700bp
CTCACAGGTTCAGGTACAAAGATCTTTACATTGCCACTAAAGGGTTCAGA
GAGAAAGAACTGCTAGGCAGCGGCGGATTTGGGAGAGTGTATAGGGGTAC
ACTGCCCAAATCCAAAATTGAGATTGCAGTGAAGAAGATTTCTCACGAAT
CCAGACAGGGGATGAAGGAATTCGTTGCGGAGATTGTGAGCATCGGTCGC
CTCAGGCACCGGAATTTAGTGCAACTCTTGGGATATTGCCGGCGTAAAGG
GGAGCTGCTTTTGGTCTATGATTACATGCCTAATGGAAGCTTAGACAAAT
ACCTCTATAACCAACCAAAAGTCACACTAAACTGGAGACAAAGATATGGA
GTCATCAAAGGTGTCGCATTAGGCCTGTTATATTTGCACGAAGAATGGGA
ACAAGTTGTGATTCACAGAGATGTTAAGGCAAGTAACGTGTTGCTTGATG
GTGAATTAAACGGAAGATTGGGAGATTTCGGCCTGGCAAGATTATACGAC
CACGGAACAGATCCACAAACAACGCACGTTGTGGGAACACTTGGGTACCT
TGCCCCTGAGCACAGTCGGACAGGCAAGGCCACCACAAGCGCTGATGTGT
TTTCATTTGGGGCATTTTTGCTTGAAGTTGCTTGCGGGAGAAGGCCAATT
GAGAGACAGAGCCAGAAGAGAATTTATTTTGGTTGATTGCGTGNTTGACT
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